Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01716 Corylus avellana HOM05D005822 ORTHO05D028575 1.3e-82 309.7 159 100.0
Haze_04302 Corylus avellana HOM05D028464 ORTHO05D164109 3.4e-30 135.6 211 50.2
Cfa008156 Carpinus fangiana HOM05D005822 ORTHO05D007267 2.5e-17 92.8 48 89.6
Haze_04300 Corylus avellana HOM05D028464 ORTHO05D028575 4.3e-17 92.0 77 75.3
Haze_13887 Corylus avellana HOM05D005822 ORTHO05D007267 1.3e-16 90.5 48 87.5
Cc02_g04350 Coffea canephora HOM05D005822 ORTHO05D007267 6.2e-16 88.2 76 57.9
QL09p005687 Quercus lobata HOM05D005822 ORTHO05D007267 1.1e-15 87.4 48 81.2
Sabra03G0075200 Salix brachista HOM05D005822 ORTHO05D007267 1.1e-15 87.4 76 57.9
Dinv28582 Davidia involucrata HOM05D005822 ORTHO05D007267 1.4e-15 87.0 48 81.2
Lsat_1_v5_gn_9_52001 Lactuca sativa HOM05D005822 ORTHO05D007267 2.4e-15 86.3 75 56.0
Atru.chr8.1041 Acer truncatum HOM05D005822 ORTHO05D007267 4.0e-15 85.5 48 81.2
Ciclev10004670m.g Citrus clementina HOM05D005822 ORTHO05D007267 4.0e-15 85.5 76 56.6
Cpa.g.sc3.330 Carica papaya HOM05D005822 ORTHO05D007267 9.0e-15 84.3 48 75.0
Gohir.D12G200700 Gossypium hirsutum HOM05D005822 ORTHO05D007267 9.0e-15 84.3 76 55.3
Gorai.008G215800 Gossypium raimondii HOM05D005822 ORTHO05D007267 9.0e-15 84.3 76 55.3
HanXRQChr16g0512801 Helianthus annuus HOM05D005822 ORTHO05D007267 9.0e-15 84.3 75 53.3
Oeu022478.1 Olea europaea HOM05D005822 ORTHO05D007267 1.5e-14 83.6 48 77.1
Potri.001G124900 Populus trichocarpa HOM05D005822 ORTHO05D007267 1.5e-14 83.6 76 55.3
Duzib205G0525 Durio zibethinus HOM05D005822 ORTHO05D007267 2.0e-14 83.2 76 53.9
Manes.02G134200 Manihot esculenta HOM05D005822 ORTHO05D007267 2.0e-14 83.2 48 77.1
PSO063G1588 Papaver somniferum HOM05D005822 ORTHO05D007267 2.0e-14 83.2 48 77.1
PSO782G2939 Papaver somniferum HOM05D005822 ORTHO05D007267 2.0e-14 83.2 48 77.1
Nitab4.5_0002816g0040 Nicotiana tabacum HOM05D005822 ORTHO05D007267 2.6e-14 82.8 76 53.9
Nitab4.5_0003490g0080 Nicotiana tabacum HOM05D005822 ORTHO05D007267 2.6e-14 82.8 76 53.9
TAR629G1836 Trochodendron aralioides HOM05D005822 ORTHO05D007267 2.6e-14 82.8 48 77.1
Aqoxy5G03861 Aquilegia oxysepala HOM05D005822 ORTHO05D007267 3.4e-14 82.4 48 77.1
EL10Ac3g05850 Beta vulgaris HOM05D005822 ORTHO05D007267 3.4e-14 82.4 48 75.0
CSS0032435 Camellia sinensis var. sinensis HOM05D005822 ORTHO05D007267 3.4e-14 82.4 48 77.1
CSS0049205 Camellia sinensis var. sinensis HOM05D005822 ORTHO05D007267 3.4e-14 82.4 48 77.1
CANSAT56G1500 Cannabis sativa HOM05D005822 ORTHO05D007267 3.4e-14 82.4 48 77.1
Psat7g157640 Pisum sativum HOM05D005822 ORTHO05D007267 3.4e-14 82.4 76 53.9
SGA_v2.0_scaffold44G16550 Striga asiatica HOM05D005822 ORTHO05D007267 3.4e-14 82.4 48 77.1
CiPaw.04G059500 Carya illinoinensis HOM05D005822 ORTHO05D007267 4.4e-14 82.0 48 79.2
Nn1g00973 Nelumbo nucifera HOM05D005822 ORTHO05D007267 4.4e-14 82.0 48 77.1
Solyc03g093240.4 Solanum lycopersicum HOM05D005822 ORTHO05D007267 4.4e-14 82.0 48 75.0
GSVIVG01018681001 Vitis vinifera HOM05D005822 ORTHO05D007267 4.4e-14 82.0 48 77.1
Gohir.A12G198100 Gossypium hirsutum HOM05D005822 ORTHO05D007267 5.8e-14 81.6 48 75.0
Hund04595 Selenicereus undatus HOM05D005822 ORTHO05D007267 5.8e-14 81.6 48 75.0
CARHR156090 Cardamine hirsuta HOM05D005822 ORTHO05D007267 7.6e-14 81.3 76 52.6
Lj1A979T81 Lonicera japonica HOM05D005822 ORTHO05D007267 7.6e-14 81.3 48 75.0
Thecc.03G154900 Theobroma cacao HOM05D005822 ORTHO05D007267 7.6e-14 81.3 48 77.1
AT3G47450 Arabidopsis thaliana HOM05D005822 ORTHO05D007267 9.9e-14 80.9 76 52.6
BcaB01g00923 Brassica carinata HOM05D005822 ORTHO05D007267 9.9e-14 80.9 76 52.6
BcaC01g01823 Brassica carinata HOM05D005822 ORTHO05D007267 9.9e-14 80.9 76 52.6
Thhalv10010252m.g Eutrema salsugineum HOM05D005822 ORTHO05D007267 9.9e-14 80.9 76 52.6
Sopen03g024040 Solanum pennellii HOM05D005822 ORTHO05D007267 9.9e-14 80.9 48 72.9
C03p71590 Brassica napus HOM05D005822 ORTHO05D007267 1.3e-13 80.5 77 51.9
BolC3t19450H Brassica oleracea HOM05D005822 ORTHO05D007267 1.3e-13 80.5 77 51.9
Carub.0005s1354 Capsella rubella HOM05D005822 ORTHO05D007267 1.3e-13 80.5 76 52.6
Sp5g14430 Schrenkiella parvula HOM05D005822 ORTHO05D007267 1.3e-13 80.5 76 51.3
THA.LOC104819450 Tarenaya hassleriana HOM05D005822 ORTHO05D007267 1.3e-13 80.5 76 52.6
Actinidia13579 Actinidia chinensis HOM05D005822 ORTHO05D007267 1.7e-13 80.1 46 78.3
MSTRG.8827 Avicennia marina HOM05D005822 ORTHO05D007267 1.7e-13 80.1 48 72.9
DCAR_014621 Daucus carota HOM05D005822 ORTHO05D007267 1.7e-13 80.1 48 72.9
MBI12_g29751_MAGBIO Magnolia biondii HOM05D005822 ORTHO05D007267 1.7e-13 80.1 48 72.9
Medtr2g060420 Medicago truncatula HOM05D005822 ORTHO05D007267 1.7e-13 80.1 76 51.3
TPR.G20240 Trifolium pratense HOM05D005822 ORTHO05D007267 1.7e-13 80.1 76 50.0
vmacro06808 Vaccinium macrocarpon HOM05D005822 ORTHO05D007267 1.7e-13 80.1 47 76.6
ECA232G0361 Erigeron canadensis HOM05D005822 ORTHO05D007267 2.2e-13 79.7 46 73.9
Eucgr.A02894 Eucalyptus grandis HOM05D005822 ORTHO05D007267 2.2e-13 79.7 48 75.0
AL5G26670 Arabidopsis lyrata HOM05D005822 ORTHO05D007267 2.9e-13 79.3 76 51.3
Lj3g0012047 Lotus japonicus HOM05D005822 ORTHO05D007267 2.9e-13 79.3 76 52.6
PGR042G1636 Punica granatum HOM05D005822 ORTHO05D007267 2.9e-13 79.3 76 52.6
RcHm_v2.0_Chr1g0374211 Rosa chinensis HOM05D005822 ORTHO05D007267 2.9e-13 79.3 48 72.9
TWI14G0278 Tripterygium wilfordii HOM05D005822 ORTHO05D007267 2.9e-13 79.3 48 72.9
Ah.03g147280 Amaranthus hybridus HOM05D005822 ORTHO05D007267 4.9e-13 78.6 48 70.8
arahy.Tifrunner.gnm1.ann1.47454T Arachis hypogaea HOM05D005822 ORTHO05D007267 4.9e-13 78.6 48 75.0
Cfa006488 Carpinus fangiana HOM05D028464 ORTHO05D028575 4.9e-13 78.6 61 80.3
Glyma.09G224600 Glycine max HOM05D005822 ORTHO05D007267 4.9e-13 78.6 48 75.0
Glyma.12G012400 Glycine max HOM05D005822 ORTHO05D007267 4.9e-13 78.6 48 75.0
A06p20210 Brassica napus HOM05D005822 ORTHO05D007267 6.4e-13 78.2 48 70.8
BraA06t25104Z Brassica rapa HOM05D005822 ORTHO05D007267 6.4e-13 78.2 48 70.8
FvH4_7g27380 Fragaria vesca HOM05D005822 ORTHO05D007267 6.4e-13 78.2 48 70.8
FAN03G1300 Fragaria x ananassa HOM05D005822 ORTHO05D007267 6.4e-13 78.2 48 70.8
FAN06G4841 Fragaria x ananassa HOM05D005822 ORTHO05D007267 6.4e-13 78.2 48 70.8
FAN06G5026 Fragaria x ananassa HOM05D005822 ORTHO05D007267 6.4e-13 78.2 48 70.8
Prupe.2G276500 Prunus persica HOM05D005822 ORTHO05D007267 6.4e-13 78.2 48 70.8
Aa31LG4G16250 Aethionema arabicum HOM05D005822 ORTHO05D007267 8.4e-13 77.8 76 48.7
MD07G1252900 Malus domestica HOM05D005822 ORTHO05D007267 8.4e-13 77.8 48 70.8
SalBow8G0561 Salvia bowleyana HOM05D005822 ORTHO05D007267 8.4e-13 77.8 47 72.3
Sed0004127 Sechium edule HOM05D005822 ORTHO05D007267 8.4e-13 77.8 48 70.8
ClCG01G004960 Citrullus lanatus HOM05D005822 ORTHO05D007267 1.1e-12 77.4 48 70.8
MELO3C005439.2 Cucumis melo HOM05D005822 ORTHO05D007267 1.1e-12 77.4 48 70.8
CsaV3_5G005200 Cucumis sativus L. HOM05D005822 ORTHO05D007267 1.1e-12 77.4 48 70.8
AUR62002209 Chenopodium quinoa HOM05D005822 ORTHO05D007267 1.9e-12 76.6 66 53.0
Migut.F00481 Erythranthe guttata HOM05D005822 ORTHO05D007267 1.9e-12 76.6 48 68.8
Ca_19642_v3 Cicer arietinum L. HOM05D005822 ORTHO05D007267 2.4e-12 76.3 76 50.0
Phvul.011G015300 Phaseolus vulgaris HOM05D005822 ORTHO05D007267 2.4e-12 76.3 76 52.6
ATR0317G089 Amborella trichopoda HOM05D005822 ORTHO05D007267 4.2e-12 75.5 46 71.7
Sc19g0002050 Simmondsia chinensis HOM05D005822 ORTHO05D007267 4.2e-12 75.5 48 70.8
VMungo1127G1665 Vigna mungo HOM05D005822 ORTHO05D007267 4.2e-12 75.5 48 72.9
Zm00001eb209870 Zea mays HOM05D005822 ORTHO05D007267 4.2e-12 75.5 74 50.0
AUR62015490 Chenopodium quinoa HOM05D005822 ORTHO05D007267 7.1e-12 74.7 66 51.5
Os02g0104700 Oryza sativa ssp. japonica HOM05D005822 ORTHO05D007267 9.3e-12 74.3 48 68.8
Lalb_Chr06g0161881 Lupinus albus HOM05D005822 ORTHO05D007267 1.6e-11 73.6 48 66.7
unitig_52.g17763 Utricularia gibba HOM05D005822 ORTHO05D007267 1.6e-11 73.6 48 66.7
Mapoly0014s0202 Marchantia polymorpha HOM05D005822 ORTHO05D007267 2.7e-11 72.8 48 64.6
Cfa006486 Carpinus fangiana HOM05D028464 ORTHO05D028575 3.0e-10 69.3 87 57.5
Rhsim03G0166500 Rhododendron simsii HOM05D005822 ORTHO05D007267 1.9e-09 66.6 77 48.1
SMO367G0603 Selaginella moellendorffii HOM05D005822 ORTHO05D007267 1.3e-08 63.9 47 53.2
AagrBONN_evm.TU.Sc2ySwM_344.3689 Anthoceros agrestis HOM05D005822 ORTHO05D007267 1.6e-08 63.5 74 41.9
Pp3c7_23510 Physcomitrium patens HOM05D005822 ORTHO05D007267 6.2e-08 61.6 48 56.2
CBR_g47954 Chara braunii HOM05D005822 ORTHO05D007267 1.1e-07 60.8 79 40.5
Peaxi162Scf00241g00035 Petunia axillaris HOM05D005822 ORTHO05D007267 2.4e-07 59.7 47 63.8
VMungo0251G1366 Vigna mungo HOM05D005822 ORTHO05D007267 3.4e-06 55.8 82 40.2
Actinidia21289 Actinidia chinensis HOM05D005822 ORTHO05D007267 7.6e-06 54.7 31 74.2


User provided reference genes

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