Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01706 Corylus avellana HOM05D004092 ORTHO05D005448 4.9e-129 464.5 245 100.0
Cfa005512 Carpinus fangiana HOM05D004092 ORTHO05D005448 1.7e-121 439.5 243 95.5
Haze_01709 Corylus avellana HOM05D004092 ORTHO05D005448 3.8e-121 438.3 238 96.6
QL04p079824 Quercus lobata HOM05D004092 ORTHO05D005448 9.3e-104 380.6 239 83.3
QL04p080030 Quercus lobata HOM05D004092 ORTHO05D005448 9.3e-104 380.6 239 83.3
CiPaw.11G063100 Carya illinoinensis HOM05D004092 ORTHO05D005448 2.4e-99 365.9 242 80.2
Prupe.4G136600 Prunus persica HOM05D004092 ORTHO05D005448 2.3e-94 349.4 242 77.3
MD10G1205100 Malus domestica HOM05D004092 ORTHO05D005448 5.3e-91 338.2 240 75.4
MD05G1223600 Malus domestica HOM05D004092 ORTHO05D005448 9.1e-91 337.4 240 75.4
Thecc.07G169400 Theobroma cacao HOM05D004092 ORTHO05D005448 9.1e-91 337.4 239 76.6
Sabra05G0079500 Salix brachista HOM05D004092 ORTHO05D005448 1.2e-90 337.0 243 74.5
Hma1.2p1_0334F.1_g128570 Hydrangea macrophylla HOM05D004092 ORTHO05D005448 5.9e-90 334.7 234 76.9
CsaV3_7G022820 Cucumis sativus L. HOM05D004092 ORTHO05D005448 1.0e-89 334.0 238 75.6
COL.COLO4_07946 Corchorus olitorius HOM05D004092 ORTHO05D005448 5.0e-89 331.6 240 75.8
Potri.005G096900 Populus trichocarpa HOM05D004092 ORTHO05D005448 1.1e-88 330.5 243 72.4
GSVIVG01036806001 Vitis vinifera HOM05D004092 ORTHO05D005448 2.5e-88 329.3 236 74.6
ClCG09G022650 Citrullus lanatus HOM05D004092 ORTHO05D005448 4.2e-88 328.6 238 75.2
FvH4_3g15370 Fragaria vesca HOM05D004092 ORTHO05D005448 3.6e-87 325.5 239 74.5
FAN11G0738 Fragaria x ananassa HOM05D004092 ORTHO05D005448 3.6e-87 325.5 239 74.5
MELO3C012616.2 Cucumis melo HOM05D004092 ORTHO05D005448 4.6e-87 325.1 238 73.9
FAN25G1415 Fragaria x ananassa HOM05D004092 ORTHO05D005448 6.1e-87 324.7 239 74.1
Manes.14G011200 Manihot esculenta HOM05D004092 ORTHO05D005448 6.1e-87 324.7 237 73.8
RcHm_v2.0_Chr5g0025821 Rosa chinensis HOM05D004092 ORTHO05D005448 7.9e-87 324.3 231 75.8
FAN16G3313 Fragaria x ananassa HOM05D004092 ORTHO05D005448 1.8e-86 323.2 239 73.6
Lju337C5G4 Lonicera japonica HOM05D004092 ORTHO05D005448 6.7e-86 321.2 232 73.7
Dinv19600 Davidia involucrata HOM05D004092 ORTHO05D005448 1.5e-85 320.1 236 72.9
Duzib213G0752 Durio zibethinus HOM05D004092 ORTHO05D005448 3.3e-85 318.9 240 74.2
Atru.chr1.122 Acer truncatum HOM05D004092 ORTHO05D005448 7.4e-85 317.8 238 72.3
CSS0013287 Camellia sinensis var. sinensis HOM05D004092 ORTHO05D005448 9.7e-85 317.4 234 73.5
Peaxi162Scf00041g01738 Petunia axillaris HOM05D004092 ORTHO05D005448 1.7e-84 316.6 235 71.1
CANSAT80G2562 Cannabis sativa HOM05D004092 ORTHO05D005448 4.8e-84 315.1 236 73.3
MSTRG.7071 Avicennia marina HOM05D004092 ORTHO05D005448 1.8e-83 313.2 237 70.0
Lj1g0019540 Lotus japonicus HOM05D004092 ORTHO05D005448 3.1e-83 312.4 239 68.2
Sed0009567 Sechium edule HOM05D004092 ORTHO05D005448 4.1e-83 312.0 238 72.3
Ciclev10004308m.g Citrus clementina HOM05D004092 ORTHO05D005448 6.9e-83 311.2 240 70.0
Eucgr.E01785 Eucalyptus grandis HOM05D004092 ORTHO05D005448 6.9e-83 311.2 237 69.2
TWI38G0748 Tripterygium wilfordii HOM05D004092 ORTHO05D005448 1.2e-82 310.5 240 71.7
Glyma.12G070100 Glycine max HOM05D004092 ORTHO05D005448 3.4e-82 308.9 237 68.8
Lalb_Chr01g0007101 Lupinus albus HOM05D004092 ORTHO05D005448 3.4e-82 308.9 237 67.9
Gohir.D13G126400 Gossypium hirsutum HOM05D004092 ORTHO05D005448 4.5e-82 308.5 239 72.0
Lalb_Chr03g0031641 Lupinus albus HOM05D004092 ORTHO05D005448 1.3e-81 307.0 242 67.8
Oeu051991.1 Olea europaea HOM05D004092 ORTHO05D005448 1.3e-81 307.0 238 68.5
Actinidia35425 Actinidia chinensis HOM05D004092 ORTHO05D005448 2.9e-81 305.8 233 70.8
arahy.Tifrunner.gnm1.ann1.R5WWIH Arachis hypogaea HOM05D004092 ORTHO05D005448 5.0e-81 305.1 240 67.5
TAR362G1264 Trochodendron aralioides HOM05D004092 ORTHO05D005448 5.0e-81 305.1 246 68.7
Glyma.10G245700 Glycine max HOM05D004092 ORTHO05D005448 8.5e-81 304.3 237 67.1
DCAR_026669 Daucus carota HOM05D004092 ORTHO05D005448 1.1e-80 303.9 234 68.8
arahy.Tifrunner.gnm1.ann1.7JS6EV Arachis hypogaea HOM05D004092 ORTHO05D005448 1.4e-80 303.5 240 67.1
Gohir.A13G122400 Gossypium hirsutum HOM05D004092 ORTHO05D005448 1.9e-80 303.1 234 72.2
Gorai.013G141600 Gossypium raimondii HOM05D004092 ORTHO05D005448 2.5e-80 302.8 239 71.1
vmacro09775 Vaccinium macrocarpon HOM05D004092 ORTHO05D005448 4.2e-80 302.0 236 69.9
Cpa.g.sc4.30 Carica papaya HOM05D004092 ORTHO05D005448 5.5e-80 301.6 237 67.9
Medtr7g070240 Medicago truncatula HOM05D004092 ORTHO05D005448 1.2e-79 300.4 237 67.9
Ca_07696_v3 Cicer arietinum L. HOM05D004092 ORTHO05D005448 1.6e-79 300.1 237 66.2
Nitab4.5_0000232g0210 Nicotiana tabacum HOM05D004092 ORTHO05D005448 1.6e-79 300.1 235 68.5
Migut.M01537 Erythranthe guttata HOM05D004092 ORTHO05D005448 1.8e-78 296.6 237 66.2
HanXRQChr11g0335681 Helianthus annuus HOM05D004092 ORTHO05D005448 1.1e-77 293.9 233 64.4
Phvul.L001854 Phaseolus vulgaris HOM05D004092 ORTHO05D005448 1.1e-77 293.9 232 67.7
Phvul.L001940 Phaseolus vulgaris HOM05D004092 ORTHO05D005448 1.1e-77 293.9 232 67.7
Phvul.011G076150 Phaseolus vulgaris HOM05D004092 ORTHO05D005448 2.6e-77 292.7 238 66.0
Nitab4.5_0005777g0060 Nicotiana tabacum HOM05D004092 ORTHO05D005448 9.7e-77 290.8 238 66.8
CAN.G851.30 Capsicum annuum HOM05D004092 ORTHO05D005448 1.3e-76 290.4 240 66.7
TPR.G6646 Trifolium pratense HOM05D004092 ORTHO05D005448 2.2e-76 289.7 237 65.8
Lsat_1_v5_gn_7_110180 Lactuca sativa HOM05D004092 ORTHO05D005448 2.8e-76 289.3 237 64.1
Solyc04g074090.4 Solanum lycopersicum HOM05D004092 ORTHO05D005448 3.7e-76 288.9 239 66.9
Psat3g124440 Pisum sativum HOM05D004092 ORTHO05D005448 7.0e-75 284.6 225 65.8
Nn5g27645 Nelumbo nucifera HOM05D004092 ORTHO05D005448 9.1e-75 284.3 235 66.0
SGA_v2.0_scaffold186G40203 Striga asiatica HOM05D004092 ORTHO05D005448 1.6e-74 283.5 260 59.6
Sc08g0008610 Simmondsia chinensis HOM05D004092 ORTHO05D005448 4.5e-74 282.0 238 64.3
VMungo1127G2087 Vigna mungo HOM05D004092 ORTHO05D005448 4.5e-74 282.0 239 65.3
ECA236G4689 Erigeron canadensis HOM05D004092 ORTHO05D005448 1.0e-73 280.8 238 62.6
Cc05_g16260 Coffea canephora HOM05D004092 ORTHO05D005448 2.2e-73 279.6 239 66.1
PGR044G0523 Punica granatum HOM05D004092 ORTHO05D005448 6.5e-73 278.1 232 66.8
AT1G79150 Arabidopsis thaliana HOM05D004092 ORTHO05D005448 2.5e-72 276.2 234 63.7
AUR62016815 Chenopodium quinoa HOM05D004092 ORTHO05D005448 3.2e-72 275.8 241 61.4
SalBow8G5525 Salvia bowleyana HOM05D004092 ORTHO05D005448 4.2e-72 275.4 237 61.6
Carub.0002s2602 Capsella rubella HOM05D004092 ORTHO05D005448 7.2e-72 274.6 215 67.4
MBI18_g01899_MAGBIO Magnolia biondii HOM05D004092 ORTHO05D005448 1.2e-71 273.9 222 65.8
BolC6t40319H Brassica oleracea HOM05D004092 ORTHO05D005448 2.1e-71 273.1 217 66.4
CAN.G101.16 Capsicum annuum HOM05D004092 ORTHO05D005448 3.6e-71 272.3 219 68.9
AUR62026892 Chenopodium quinoa HOM05D004092 ORTHO05D005448 3.6e-71 272.3 241 60.2
BcaC08g47477 Brassica carinata HOM05D004092 ORTHO05D005448 1.0e-70 270.8 239 62.3
C06p53020 Brassica napus HOM05D004092 ORTHO05D005448 1.0e-70 270.8 239 62.3
Aa31LG4G1850 Aethionema arabicum HOM05D004092 ORTHO05D005448 1.8e-70 270.0 237 62.4
SalBow6G4089 Salvia bowleyana HOM05D004092 ORTHO05D005448 4.0e-70 268.9 247 59.9
THA.LOC104808127 Tarenaya hassleriana HOM05D004092 ORTHO05D005448 4.0e-70 268.9 239 62.8
A07p44270 Brassica napus HOM05D004092 ORTHO05D005448 8.8e-70 267.7 239 61.9
BraA07t31936Z Brassica rapa HOM05D004092 ORTHO05D005448 8.8e-70 267.7 239 61.9
PSO063G0010 Papaver somniferum HOM05D004092 ORTHO05D005448 2.0e-69 266.5 238 61.3
Sp5g34210 Schrenkiella parvula HOM05D004092 ORTHO05D005448 2.6e-69 266.2 235 61.7
Aqoxy3G03661 Aquilegia oxysepala HOM05D004092 ORTHO05D005448 3.3e-69 265.8 236 64.8
SalBow6G0067 Salvia bowleyana HOM05D004092 ORTHO05D005448 4.4e-69 265.4 247 59.5
AL2G39620 Arabidopsis lyrata HOM05D004092 ORTHO05D005448 7.5e-69 264.6 242 62.0
BcaB02g08669 Brassica carinata HOM05D004092 ORTHO05D005448 9.7e-69 264.2 239 61.5
ATR0763G063 Amborella trichopoda HOM05D004092 ORTHO05D005448 2.8e-68 262.7 242 60.3
CARHR072800 Cardamine hirsuta HOM05D004092 ORTHO05D005448 2.8e-68 262.7 238 60.9
PSO782G4649 Papaver somniferum HOM05D004092 ORTHO05D005448 4.8e-68 261.9 238 60.5
CDE01G0334 Ceratophyllum demersum HOM05D004092 ORTHO05D005448 8.2e-68 261.2 232 61.2
EL10Ac2g03277 Beta vulgaris HOM05D004092 ORTHO05D005448 1.0e-65 254.2 253 58.1
BcaNung04898 Brassica carinata HOM05D004092 ORTHO05D005448 2.5e-64 249.6 167 74.9
Zm00001eb020130 Zea mays HOM05D004092 ORTHO05D005448 7.2e-64 248.1 240 58.8
SEGI_30171 Sequoiadendron giganteum HOM05D004092 ORTHO05D005448 1.7e-60 236.9 241 57.3
HPP92_004307 Vanilla planifolia HOM05D004092 ORTHO05D005448 6.3e-60 235.0 236 56.8
unitig_32.g11084 Utricularia gibba HOM05D004092 ORTHO05D005448 1.6e-58 230.3 215 58.1
Os06g0498500 Oryza sativa ssp. japonica HOM05D004092 ORTHO05D005448 3.8e-57 225.7 231 56.3
Phvul.011G073301 Phaseolus vulgaris HOM05D004092 ORTHO05D005448 2.3e-54 216.5 181 64.6
SHI21022 Sapria himalayana HOM05D004092 ORTHO05D005448 8.6e-49 198.0 162 65.4
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 8.9e-46 188.0 208 55.3
AagrBONN_evm.TU.Sc2ySwM_117.3368 Anthoceros agrestis HOM05D004092 ORTHO05D005448 1.1e-43 181.0 235 45.1
Pp3c3_9760 Physcomitrium patens HOM05D004092 ORTHO05D005448 3.4e-37 159.5 249 41.4
Sopen00g012990 Solanum pennellii HOM05D004092 ORTHO05D005448 2.9e-36 156.4 158 58.2
SMO169G0313 Selaginella moellendorffii HOM05D004092 ORTHO05D005448 6.0e-34 148.7 248 40.3
Sopen00g013080 Solanum pennellii HOM05D004092 ORTHO05D005448 6.8e-30 135.2 81 82.7
Mapoly0001s0281 Marchantia polymorpha HOM05D004092 ORTHO05D005448 1.5e-29 134.0 207 41.1
CBR_g30814 Chara braunii HOM05D004092 ORTHO05D005448 4.4e-29 132.5 157 45.9
Thhalv10018125m.g Eutrema salsugineum HOM05D004092 ORTHO05D005448 4.9e-28 129.0 86 75.6
Psat1g207400 Pisum sativum HOM05D004092 ORTHO05D005448 6.4e-28 128.6 142 53.5
Cre16.g659600 Chlamydomonas reinhardtii HOM05D004092 ORTHO05D005448 1.2e-13 81.3 134 38.1
MCO10G157 Micromonas commoda HOM05D004092 ORTHO05D005448 1.3e-12 77.8 231 32.0
Lsat_1_v5_gn_2_21921 Lactuca sativa HOM05D004092 ORTHO05D005448 8.4e-12 75.1 48 70.8
ECA232G3953 Erigeron canadensis HOM05D015936 ORTHO05D022524 1.9e-08 63.9 65 50.8


User provided reference genes

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