Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01507 Corylus avellana HOM05D003486 ORTHO05D004600 2.6e-86 322.0 160 100.0
Cfa015169 Carpinus fangiana HOM05D003486 ORTHO05D004600 1.5e-65 253.1 132 91.7
CiPaw.01G100100 Carya illinoinensis HOM05D003486 ORTHO05D004600 8.9e-63 243.8 132 87.1
QL10p048816 Quercus lobata HOM05D003486 ORTHO05D004600 7.5e-62 240.7 132 85.6
MD04G1040400 Malus domestica HOM05D003486 ORTHO05D004600 1.6e-56 223.0 132 79.5
Gohir.D10G129301 Gossypium hirsutum HOM05D003486 ORTHO05D004600 6.2e-56 221.1 125 81.6
Gorai.011G142600 Gossypium raimondii HOM05D003486 ORTHO05D004600 6.2e-56 221.1 125 81.6
Prupe.1G194100 Prunus persica HOM05D003486 ORTHO05D004600 1.8e-55 219.5 132 77.3
Thecc.04G179700 Theobroma cacao HOM05D003486 ORTHO05D004600 3.1e-55 218.8 125 80.8
Gohir.A10G137350 Gossypium hirsutum HOM05D003486 ORTHO05D004600 8.9e-55 217.2 125 80.8
Manes.11G120800 Manihot esculenta HOM05D003486 ORTHO05D004600 2.6e-54 215.7 128 76.6
Duzib151G0706 Durio zibethinus HOM05D003486 ORTHO05D004600 7.5e-54 214.2 127 79.5
Lj3g0017553 Lotus japonicus HOM05D003486 ORTHO05D004600 7.5e-54 214.2 126 78.6
FAN17G1210 Fragaria x ananassa HOM05D003486 ORTHO05D004600 1.3e-53 213.4 132 73.5
Lj6C53T8 Lonicera japonica HOM05D003486 ORTHO05D004600 1.3e-53 213.4 126 76.2
RcHm_v2.0_Chr4g0406781 Rosa chinensis HOM05D003486 ORTHO05D004600 1.7e-53 213.0 133 74.4
Hma1.2p1_0847F.1_g227890 Hydrangea macrophylla HOM05D003486 ORTHO05D004600 2.2e-53 212.6 137 75.2
Potri.007G128300 Populus trichocarpa HOM05D003486 ORTHO05D004600 2.2e-53 212.6 125 78.4
FAN12G3204 Fragaria x ananassa HOM05D003486 ORTHO05D004600 1.4e-52 209.9 132 72.7
Dinv44191 Davidia involucrata HOM05D003486 ORTHO05D004600 2.4e-52 209.1 126 77.0
FvH4_4g10800 Fragaria vesca HOM05D003486 ORTHO05D004600 3.2e-52 208.8 132 72.7
Rhsim02G0076900 Rhododendron simsii HOM05D003486 ORTHO05D004600 3.2e-52 208.8 133 72.9
arahy.Tifrunner.gnm1.ann1.NQA14U Arachis hypogaea HOM05D003486 ORTHO05D004600 5.4e-52 208.0 125 77.6
Glyma.12G052400 Glycine max HOM05D003486 ORTHO05D004600 5.4e-52 208.0 126 77.0
Eucgr.A00081 Eucalyptus grandis HOM05D003486 ORTHO05D004600 7.1e-52 207.6 132 73.5
Ciclev10023270m.g Citrus clementina HOM05D003486 ORTHO05D004600 9.2e-52 207.2 126 75.4
Atru.chr3.1489 Acer truncatum HOM05D003486 ORTHO05D004600 1.2e-51 206.8 134 73.1
ClCG08G004770 Citrullus lanatus HOM05D003486 ORTHO05D004600 1.2e-51 206.8 142 70.4
PGR083G0732 Punica granatum HOM05D003486 ORTHO05D004600 1.6e-51 206.5 131 74.0
CANSAT78G0197 Cannabis sativa HOM05D003486 ORTHO05D004600 2.7e-51 205.7 133 74.4
arahy.Tifrunner.gnm1.ann1.Q0VLRE Arachis hypogaea HOM05D003486 ORTHO05D004600 4.6e-51 204.9 125 76.8
Eucgr.A00277 Eucalyptus grandis HOM05D003486 ORTHO05D004600 4.6e-51 204.9 132 72.7
MELO3C011660.2 Cucumis melo HOM05D003486 ORTHO05D004600 1.7e-50 203.0 126 73.8
Hund03158 Selenicereus undatus HOM05D003486 ORTHO05D004600 2.3e-50 202.6 128 71.9
CSS0039550 Camellia sinensis var. sinensis HOM05D003486 ORTHO05D004600 3.0e-50 202.2 126 73.8
Phvul.011G054400 Phaseolus vulgaris HOM05D003486 ORTHO05D004600 3.0e-50 202.2 126 75.4
Sabra07G0104700 Salix brachista HOM05D003486 ORTHO05D004600 3.0e-50 202.2 140 69.3
TWI15G0158 Tripterygium wilfordii HOM05D003486 ORTHO05D004600 3.0e-50 202.2 125 76.0
Ca_20787_v3 Cicer arietinum L. HOM05D003486 ORTHO05D004600 6.6e-50 201.1 126 74.6
Lsat_1_v5_gn_3_115420 Lactuca sativa HOM05D003486 ORTHO05D004600 1.5e-49 199.9 127 74.8
VMungo1127G1248 Vigna mungo HOM05D003486 ORTHO05D004600 1.5e-49 199.9 126 73.8
Nn1g09605 Nelumbo nucifera HOM05D003486 ORTHO05D004600 2.5e-49 199.1 126 71.4
Cpa.g.sc9.281 Carica papaya HOM05D003486 ORTHO05D004600 3.3e-49 198.7 125 72.8
CsaV3_6G003940 Cucumis sativus L. HOM05D003486 ORTHO05D004600 7.3e-49 197.6 126 73.8
TPR.G34255 Trifolium pratense HOM05D003486 ORTHO05D004600 2.1e-48 196.1 125 73.6
Lalb_Chr01g0003151 Lupinus albus HOM05D003486 ORTHO05D004600 2.8e-48 195.7 125 71.2
ECA240G0242 Erigeron canadensis HOM05D003486 ORTHO05D004600 3.6e-48 195.3 127 72.4
Sopen11g020460 Solanum pennellii HOM05D003486 ORTHO05D004600 4.7e-48 194.9 126 71.4
EL10Ac3g05937 Beta vulgaris HOM05D003486 ORTHO05D004600 6.2e-48 194.5 128 70.3
Medtr4g067160 Medicago truncatula HOM05D003486 ORTHO05D004600 6.2e-48 194.5 132 72.0
THA.LOC104803678 Tarenaya hassleriana HOM05D003486 ORTHO05D004600 1.8e-47 193.0 126 71.4
Aa31LG10G13760 Aethionema arabicum HOM05D003486 ORTHO05D004600 3.1e-47 192.2 125 71.2
Sp5g03730 Schrenkiella parvula HOM05D003486 ORTHO05D004600 3.1e-47 192.2 126 70.6
AUR62015385 Chenopodium quinoa HOM05D003486 ORTHO05D004600 5.2e-47 191.4 128 68.8
BcaC07g40457 Brassica carinata HOM05D003486 ORTHO05D004600 8.9e-47 190.7 125 70.4
A09p51690 Brassica napus HOM05D003486 ORTHO05D004600 8.9e-47 190.7 125 70.4
BraA09t40605Z Brassica rapa HOM05D003486 ORTHO05D004600 8.9e-47 190.7 125 70.4
Thhalv10005755m.g Eutrema salsugineum HOM05D003486 ORTHO05D004600 8.9e-47 190.7 126 69.8
HanXRQChr03g0091131 Helianthus annuus HOM05D003486 ORTHO05D004600 1.5e-46 189.9 127 72.4
GSVIVG01010758001 Vitis vinifera HOM05D003486 ORTHO05D004600 1.5e-46 189.9 129 71.3
SalBow3G2610 Salvia bowleyana HOM05D003486 ORTHO05D004600 2.0e-46 189.5 126 71.4
MBI11_g04859_MAGBIO Magnolia biondii HOM05D003486 ORTHO05D004600 2.6e-46 189.1 129 64.3
AUR62002305 Chenopodium quinoa HOM05D003486 ORTHO05D004600 7.6e-46 187.6 128 68.0
Sed0025407 Sechium edule HOM05D003486 ORTHO05D004600 7.6e-46 187.6 126 68.3
CARHR169810 Cardamine hirsuta HOM05D003486 ORTHO05D004600 1.3e-45 186.8 126 68.3
Carub.0005s2615 Capsella rubella HOM05D003486 ORTHO05D004600 2.9e-45 185.7 126 68.3
Oeu061594.1 Olea europaea HOM05D003486 ORTHO05D004600 2.9e-45 185.7 126 69.8
BcaC07g40280 Brassica carinata HOM05D003486 ORTHO05D004600 3.8e-45 185.3 125 68.8
C08p34420 Brassica napus HOM05D003486 ORTHO05D004600 3.8e-45 185.3 125 68.8
BolC8t51043H Brassica oleracea HOM05D003486 ORTHO05D004600 3.8e-45 185.3 125 68.8
Migut.G01067 Erythranthe guttata HOM05D003486 ORTHO05D004600 6.4e-45 184.5 126 70.6
ATR0824G223 Amborella trichopoda HOM05D003486 ORTHO05D004600 8.4e-45 184.1 126 69.0
AL5G41310 Arabidopsis lyrata HOM05D003486 ORTHO05D004600 8.4e-45 184.1 126 67.5
AT3G59410 Arabidopsis thaliana HOM05D003486 ORTHO05D004600 1.4e-44 183.3 126 67.5
Cc03_g12950 Coffea canephora HOM05D003486 ORTHO05D004600 1.2e-43 180.3 130 66.2
Aqoxy2G04161 Aquilegia oxysepala HOM05D003486 ORTHO05D004600 2.7e-43 179.1 118 69.5
Psat7g214880 Pisum sativum HOM05D003486 ORTHO05D004600 6.6e-42 174.5 134 64.9
SGA_v2.0_scaffold17G08091 Striga asiatica HOM05D003486 ORTHO05D004600 8.7e-42 174.1 125 68.0
PSO017G7170 Papaver somniferum HOM05D003486 ORTHO05D004600 1.5e-41 173.3 115 71.3
PSO675G4708 Papaver somniferum HOM05D003486 ORTHO05D004600 7.3e-41 171.0 115 70.4
unitig_747.g21328 Utricularia gibba HOM05D003486 ORTHO05D004600 5.3e-39 164.9 132 67.4
CDE02G0726 Ceratophyllum demersum HOM05D003486 ORTHO05D004600 1.2e-38 163.7 125 60.8
Os04g0492600 Oryza sativa ssp. japonica HOM05D003486 ORTHO05D004600 9.9e-38 160.6 126 61.1
Peaxi162Scf00126g00124 Petunia axillaris HOM05D003486 ORTHO05D004600 1.6e-35 153.3 96 77.1
Nitab4.5_0001263g0040 Nicotiana tabacum HOM05D003486 ORTHO05D004600 2.7e-35 152.5 107 71.0
SEGI_08545 Sequoiadendron giganteum HOM05D003486 ORTHO05D004600 1.5e-33 146.7 121 59.5
Zm00001eb078800 Zea mays HOM05D003486 ORTHO05D004600 2.8e-32 142.5 131 55.7
Mapoly0088s0047 Marchantia polymorpha HOM05D003486 ORTHO05D004600 2.1e-27 126.3 116 51.7
Pp3c26_5370 Physcomitrium patens HOM05D003486 ORTHO05D004600 1.3e-26 123.6 113 54.0
AagrBONN_evm.TU.Sc2ySwM_344.2066 Anthoceros agrestis HOM05D003486 ORTHO05D004600 3.3e-25 119.0 127 49.6
SMO364G0666 Selaginella moellendorffii HOM05D003486 ORTHO05D004600 1.2e-22 110.5 141 45.4
Ca_28543_v3 Cicer arietinum L. HOM05D003486 ORTHO05D004600 8.7e-18 94.4 63 73.0
Nitab4.5_0001940g0050 Nicotiana tabacum HOM05D003486 ORTHO05D004600 4.5e-14 82.0 56 73.2
Cre01.g038000 Chlamydomonas reinhardtii HOM05D003486 ORTHO05D004600 5.8e-14 81.6 168 31.5
MCO05G349 Micromonas commoda HOM05D003486 ORTHO05D004600 2.5e-12 76.3 152 30.9
CBR_g19630 Chara braunii HOM05D003637 ORTHO05D004175 2.3e-10 69.7 110 38.2
Actinidia11303 Actinidia chinensis HOM05D003486 ORTHO05D004600 5.1e-10 68.6 49 55.1


User provided reference genes

Program Settings