Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0570091 Helianthus annuus HOM05D005042 ORTHO05D006080 1.8e-213 745.7 407 100.0
ECA246G3902 Erigeron canadensis HOM05D005042 ORTHO05D006080 1.4e-115 420.6 507 55.0
Lsat_1_v5_gn_3_106381 Lactuca sativa HOM05D005042 ORTHO05D006080 4.8e-105 385.6 426 60.8
Rhsim12G0071400 Rhododendron simsii HOM05D005042 ORTHO05D006080 1.8e-72 277.3 557 41.1
Migut.E00252 Erythranthe guttata HOM05D005042 ORTHO05D006080 2.0e-71 273.9 467 43.0
Cc11_g11610 Coffea canephora HOM05D005042 ORTHO05D006080 1.9e-69 267.3 597 39.5
vmacro01299 Vaccinium macrocarpon HOM05D005042 ORTHO05D006080 4.9e-65 252.7 583 38.3
Oeu021807.1 Olea europaea HOM05D005042 ORTHO05D006080 8.6e-62 241.9 451 41.5
Lj3A1027T86 Lonicera japonica HOM05D005042 ORTHO05D006080 3.3e-61 240.0 648 35.6
Oeu024162.6 Olea europaea HOM05D005042 ORTHO05D006080 2.1e-60 237.3 627 35.7
Oeu055079.1 Olea europaea HOM05D005042 ORTHO05D006080 1.2e-55 221.5 489 38.7
CsaV3_6G033840 Cucumis sativus L. HOM05D005042 ORTHO05D006080 2.7e-55 220.3 411 42.1
Hund25158 Selenicereus undatus HOM05D005042 ORTHO05D006080 3.9e-54 216.5 570 33.5
Potri.010G139100 Populus trichocarpa HOM05D005042 ORTHO05D006080 5.6e-53 212.6 171 70.2
Potri.008G109100 Populus trichocarpa HOM05D005042 ORTHO05D006080 1.2e-52 211.5 165 72.1
Potri.T155180 Populus trichocarpa HOM05D005042 ORTHO05D006080 1.2e-52 211.5 165 72.1
Actinidia07770 Actinidia chinensis HOM05D005042 ORTHO05D006080 1.6e-52 211.1 649 33.9
MELO3C011406.2 Cucumis melo HOM05D005042 ORTHO05D006080 2.1e-52 210.7 405 41.5
SGA_v2.0_scaffold287G47187 Striga asiatica HOM05D005042 ORTHO05D006080 2.1e-52 210.7 612 32.8
EL10Ac6g14684 Beta vulgaris HOM05D005042 ORTHO05D006080 2.8e-52 210.3 553 34.7
Dinv34024 Davidia involucrata HOM05D005042 ORTHO05D006080 3.6e-52 209.9 699 32.8
Eucgr.G02425 Eucalyptus grandis HOM05D005042 ORTHO05D006080 3.6e-52 209.9 523 37.1
CAN.G1021.3 Capsicum annuum HOM05D005042 ORTHO05D006080 3.1e-51 206.8 537 36.7
unitig_62.g23700 Utricularia gibba HOM05D005042 ORTHO05D006080 1.5e-50 204.5 467 37.0
Peaxi162Scf00188g01341 Petunia axillaris HOM05D005042 ORTHO05D006080 2.0e-50 204.1 527 36.6
ClCG08G010560 Citrullus lanatus HOM05D005042 ORTHO05D006080 1.3e-49 201.4 442 38.0
CANSAT11G1456 Cannabis sativa HOM05D005042 ORTHO05D006080 1.7e-49 201.1 170 66.5
PGSC0003DMG400028304 Solanum tuberosum HOM05D005042 ORTHO05D006080 8.3e-49 198.7 536 35.1
Sopen05g006670 Solanum pennellii HOM05D005042 ORTHO05D006080 1.1e-48 198.4 533 35.6
vmacro10479 Vaccinium macrocarpon HOM05D005042 ORTHO05D006080 1.4e-48 198.0 691 30.8
Manes.01G025000 Manihot esculenta HOM05D005042 ORTHO05D006080 1.9e-48 197.6 219 58.0
Solyc05g011930.4 Solanum lycopersicum HOM05D005042 ORTHO05D006080 1.9e-48 197.6 530 35.8
TAR726G0003 Trochodendron aralioides HOM05D005042 ORTHO05D006080 2.4e-48 197.2 194 63.4
CiPaw.05G122400 Carya illinoinensis HOM05D005042 ORTHO05D006080 2.1e-47 194.1 202 60.4
AUR62003064 Chenopodium quinoa HOM05D005042 ORTHO05D006080 2.1e-47 194.1 545 34.9
Lsat_1_v5_gn_4_25561 Lactuca sativa HOM05D005042 ORTHO05D006080 4.6e-47 193.0 412 38.3
ECA234G0547 Erigeron canadensis HOM05D005042 ORTHO05D006080 6.0e-47 192.6 404 40.8
Phvul.003G038600 Phaseolus vulgaris HOM05D005042 ORTHO05D006080 3.0e-46 190.3 166 68.1
Rhsim09G0122700 Rhododendron simsii HOM05D005042 ORTHO05D006080 3.0e-46 190.3 730 30.5
Lalb_Chr17g0341431 Lupinus albus HOM05D005042 ORTHO05D006080 5.1e-46 189.5 271 50.2
CiPaw.06G094600 Carya illinoinensis HOM05D005042 ORTHO05D006080 1.1e-45 188.3 176 64.2
Solyc05g011950.3 Solanum lycopersicum HOM05D005042 ORTHO05D006080 1.5e-45 188.0 165 65.5
CSS0000751 Camellia sinensis var. sinensis HOM05D005042 ORTHO05D006080 5.6e-45 186.0 698 30.5
TAR371G1247 Trochodendron aralioides HOM05D005042 ORTHO05D006080 9.6e-45 185.3 194 59.8
Prupe.1G292900 Prunus persica HOM05D005042 ORTHO05D006080 2.1e-44 184.1 175 62.9
AUR62007879 Chenopodium quinoa HOM05D005042 ORTHO05D006080 1.1e-43 181.8 432 37.7
COL.COLO4_27836 Corchorus olitorius HOM05D005042 ORTHO05D006080 8.9e-43 178.7 178 61.2
Oeu057419.1 Olea europaea HOM05D005042 ORTHO05D006080 1.5e-42 177.9 636 30.8
Cfa008851 Carpinus fangiana HOM05D005042 ORTHO05D006080 2.9e-41 173.7 195 58.5
CDE10G0431 Ceratophyllum demersum HOM05D005042 ORTHO05D006080 8.4e-41 172.2 356 41.9
Sopen05g006680 Solanum pennellii HOM05D000061 ORTHO05D000050 7.1e-40 169.1 153 64.1
Lj2g0019338 Lotus japonicus HOM05D005042 ORTHO05D006080 4.6e-39 166.4 170 59.4
THA.LOC104821992 Tarenaya hassleriana HOM05D005042 ORTHO05D006080 6.0e-39 166.0 213 53.5
Nitab4.5_0012072g0010 Nicotiana tabacum HOM05D005042 ORTHO05D006080 1.3e-38 164.9 654 31.2
ATR0827G068 Amborella trichopoda HOM05D005042 ORTHO05D006080 3.0e-38 163.7 175 58.3
PSO478G2238 Papaver somniferum HOM05D005042 ORTHO05D006080 3.0e-38 163.7 160 60.6
PSO017G3437 Papaver somniferum HOM05D005042 ORTHO05D006080 3.9e-38 163.3 160 59.4
Glyma.02G122200 Glycine max HOM05D005042 ORTHO05D006080 7.3e-37 159.1 359 39.3
TPR.G38503 Trifolium pratense HOM05D005042 ORTHO05D006080 9.6e-37 158.7 458 34.7
TPR.G34179 Trifolium pratense HOM05D005042 ORTHO05D006080 1.3e-36 158.3 168 57.1
CAN.G1021.18 Capsicum annuum HOM05D005042 ORTHO05D006080 2.1e-36 157.5 134 65.7
Haze_11871 Corylus avellana HOM05D005042 ORTHO05D006080 2.1e-36 157.5 195 54.4
Lalb_Chr10g0099121 Lupinus albus HOM05D005042 ORTHO05D006080 2.1e-36 157.5 170 61.2
VMungo1215G3453 Vigna mungo HOM05D005042 ORTHO05D006080 2.1e-36 157.5 135 68.1
Atru.chr11.1578 Acer truncatum HOM05D005042 ORTHO05D006080 2.8e-36 157.1 194 53.6
Sabra08G0082800 Salix brachista HOM05D005042 ORTHO05D006080 6.2e-36 156.0 165 57.6
TWI31G0262 Tripterygium wilfordii HOM05D005042 ORTHO05D006080 6.2e-36 156.0 167 59.3
DCAR_007205 Daucus carota HOM05D005042 ORTHO05D006080 1.4e-35 154.8 470 34.3
AT1G69060 Arabidopsis thaliana HOM05D005042 ORTHO05D006080 3.1e-35 153.7 164 58.5
Nitab4.5_0000027g0180 Nicotiana tabacum HOM05D005042 ORTHO05D006080 5.3e-35 152.9 664 30.3
CAN.G1021.10 Capsicum annuum HOM05D005042 ORTHO05D006080 2.6e-34 150.6 181 53.0
MBI16_g07040_MAGBIO Magnolia biondii HOM05D005042 ORTHO05D006080 4.4e-34 149.8 178 56.2
Nn4g23527 Nelumbo nucifera HOM05D005042 ORTHO05D006080 1.7e-33 147.9 655 29.0
HanXRQChr16g0527171 Helianthus annuus HOM05D005042 ORTHO05D006080 2.2e-33 147.5 407 35.6
SEGI_40784 Sequoiadendron giganteum HOM05D005042 ORTHO05D006080 2.2e-33 147.5 165 56.4
Aqoxy3G03731 Aquilegia oxysepala HOM05D005042 ORTHO05D006080 6.4e-33 146.0 189 55.0
Medtr5g047140 Medicago truncatula HOM05D005042 ORTHO05D006080 1.4e-32 144.8 195 50.8
Psat2g093520 Pisum sativum HOM05D005042 ORTHO05D006080 1.4e-32 144.8 194 52.1
Thecc.02G323700 Theobroma cacao HOM05D005042 ORTHO05D006080 1.4e-32 144.8 201 50.7
Aa31LG4G11790 Aethionema arabicum HOM05D005042 ORTHO05D006080 3.2e-32 143.7 230 44.8
Cpa.g.sc1.165 Carica papaya HOM05D005042 ORTHO05D006080 3.2e-32 143.7 333 36.9
DCAR_030054 Daucus carota HOM05D005042 ORTHO05D006080 4.2e-32 143.3 446 34.5
arahy.Tifrunner.gnm1.ann1.L0BNS4 Arachis hypogaea HOM05D005042 ORTHO05D006080 1.2e-31 141.7 112 69.6
Sabra10G0107300 Salix brachista HOM05D005042 ORTHO05D006080 4.6e-31 139.8 129 65.1
Pp3c1_680 Physcomitrium patens HOM05D005042 ORTHO05D006080 2.3e-30 137.5 172 52.3
HPP92_000883 Vanilla planifolia HOM05D005042 ORTHO05D006080 3.9e-30 136.7 196 49.0
AagrBONN_evm.TU.Sc2ySwM_117.2775 Anthoceros agrestis HOM05D005042 ORTHO05D006080 8.7e-30 135.6 176 51.1
MD16G1056300 Malus domestica HOM05D005042 ORTHO05D006080 1.5e-29 134.8 362 36.7
Duzib251G0840 Durio zibethinus HOM05D005042 ORTHO05D006080 1.9e-29 134.4 199 50.3
CARHR061940 Cardamine hirsuta HOM05D005042 ORTHO05D006080 1.3e-28 131.7 162 52.5
CAN.G1021.20 Capsicum annuum HOM05D005042 ORTHO05D006080 2.1e-28 131.0 141 54.6
DCAR_023741 Daucus carota HOM05D005042 ORTHO05D006080 4.8e-28 129.8 103 68.0
TWI79G1206 Tripterygium wilfordii HOM05D005042 ORTHO05D006080 1.8e-27 127.9 169 52.1
QL05p008217 Quercus lobata HOM05D005042 ORTHO05D006080 3.1e-27 127.1 210 46.2
Glyma.01G064400 Glycine max HOM05D005042 ORTHO05D006080 5.3e-27 126.3 167 51.5
Dinv15584 Davidia involucrata HOM05D000485 ORTHO05D000341 9.0e-27 125.6 217 43.3
arahy.Tifrunner.gnm1.ann1.U4ZHW1 Arachis hypogaea HOM05D005042 ORTHO05D006080 1.5e-26 124.8 375 35.5
CAN.G1021.19 Capsicum annuum HOM05D005042 ORTHO05D006080 4.5e-26 123.2 141 56.0
PGR119G2532 Punica granatum HOM05D005042 ORTHO05D006080 9.9e-26 122.1 259 39.0
FAN07G1705 Fragaria x ananassa HOM05D005042 ORTHO05D006080 1.3e-25 121.7 287 38.3
CAN.G1021.24 Capsicum annuum HOM05D005042 ORTHO05D006080 2.9e-25 120.6 132 54.5
Ca_05058_v3 Cicer arietinum L. HOM05D005042 ORTHO05D006080 2.9e-25 120.6 460 30.7
TPR.G37754 Trifolium pratense HOM05D005042 ORTHO05D006080 2.9e-25 120.6 414 32.9
MD13G1056900 Malus domestica HOM05D005042 ORTHO05D006080 4.9e-25 119.8 296 38.5
Ah.03g138660 Amaranthus hybridus HOM05D000485 ORTHO05D000341 1.9e-24 117.9 162 48.8
Ciclev10030834m.g Citrus clementina HOM05D005042 ORTHO05D006080 2.4e-24 117.5 172 49.4
FAN17G2893 Fragaria x ananassa HOM05D005042 ORTHO05D006080 1.6e-23 114.8 287 37.6
SEGI_37091 Sequoiadendron giganteum HOM05D005042 ORTHO05D006080 6.0e-23 112.8 193 44.6
PGSC0003DMG400028305 Solanum tuberosum HOM05D005042 ORTHO05D006080 6.0e-23 112.8 86 67.4
Solyc05g011960.4 Solanum lycopersicum HOM05D005042 ORTHO05D006080 7.9e-23 112.5 86 66.3
Zm00001eb057530 Zea mays HOM05D005042 ORTHO05D006080 1.3e-22 111.7 176 47.2
CDE10G0071 Ceratophyllum demersum HOM05D005042 ORTHO05D006080 1.8e-22 111.3 96 59.4
PSO063G2731 Papaver somniferum HOM05D005042 ORTHO05D006080 2.3e-22 110.9 577 26.9
Sopen05g006700 Solanum pennellii HOM05D005042 ORTHO05D006080 2.3e-22 110.9 86 65.1
FAN22G1919 Fragaria x ananassa HOM05D005042 ORTHO05D006080 5.1e-22 109.8 275 37.1
Sp5g24160 Schrenkiella parvula HOM05D005042 ORTHO05D006080 5.1e-22 109.8 161 46.6
TAR629G0517 Trochodendron aralioides HOM05D005042 ORTHO05D006080 5.1e-22 109.8 193 44.6
Dinv15585 Davidia involucrata HOM05D005042 ORTHO05D006080 1.5e-21 108.2 71 78.9
Gohir.A05G306900 Gossypium hirsutum HOM05D005042 ORTHO05D006080 1.9e-21 107.8 216 41.7
RcHm_v2.0_Chr4g0437421 Rosa chinensis HOM05D005042 ORTHO05D006080 3.3e-21 107.1 321 33.6
FAN12G1549 Fragaria x ananassa HOM05D005042 ORTHO05D006080 7.4e-21 105.9 209 42.6
Pp3c2_29040 Physcomitrium patens HOM05D005042 ORTHO05D006080 9.6e-21 105.5 216 39.8
FvH4_4g29350 Fragaria vesca HOM05D005042 ORTHO05D006080 2.1e-20 104.4 287 35.9
Manes.14G088800 Manihot esculenta HOM05D005042 ORTHO05D006080 2.1e-20 104.4 364 33.2
Gohir.D05G307200 Gossypium hirsutum HOM05D005042 ORTHO05D006080 3.7e-20 103.6 215 40.5
Gorai.009G327100 Gossypium raimondii HOM05D005042 ORTHO05D006080 6.2e-20 102.8 215 40.5
AL2G28110 Arabidopsis lyrata HOM05D005042 ORTHO05D006080 1.4e-19 101.7 163 45.4
Carub.0002s1568 Capsella rubella HOM05D005042 ORTHO05D006080 1.8e-19 101.3 536 28.9
PSO782G3512 Papaver somniferum HOM05D005042 ORTHO05D006080 3.1e-19 100.5 578 27.2
GSVIVG01012257001 Vitis vinifera HOM05D005042 ORTHO05D006080 4.0e-19 100.1 194 44.3
Thhalv10018302m.g Eutrema salsugineum HOM05D005042 ORTHO05D006080 1.5e-18 98.2 161 44.7
Os03g0752700 Oryza sativa ssp. japonica HOM05D005042 ORTHO05D006080 2.0e-18 97.8 168 44.0
Sc04g0007390 Simmondsia chinensis HOM05D005042 ORTHO05D006080 2.0e-18 97.8 548 27.2
Sed0017498 Sechium edule HOM05D005042 ORTHO05D006080 5.8e-18 96.3 352 30.4
Nn3g17525 Nelumbo nucifera HOM05D005042 ORTHO05D006080 7.6e-18 95.9 203 41.9
C06p40780 Brassica napus HOM05D005042 ORTHO05D006080 5.5e-16 89.7 213 37.6
BolC6t39355H Brassica oleracea HOM05D005042 ORTHO05D006080 5.5e-16 89.7 213 37.6
CBR_g19648 Chara braunii HOM05D005042 ORTHO05D006080 5.5e-16 89.7 105 48.6
TAR371G1032 Trochodendron aralioides HOM05D005042 ORTHO05D006080 2.7e-15 87.4 257 31.1
A07p35450 Brassica napus HOM05D005042 ORTHO05D006080 1.8e-14 84.7 248 33.5
BraA07t31136Z Brassica rapa HOM05D005042 ORTHO05D006080 1.8e-14 84.7 248 33.5
COL.COLO4_27818 Corchorus olitorius HOM05D005042 ORTHO05D006080 3.9e-14 83.6 617 25.3
Mapoly0211s0012 Marchantia polymorpha HOM05D005042 ORTHO05D006080 8.7e-14 82.4 334 31.7


User provided reference genes

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