Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 6.2e-227 790.4 391 100.0
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 5.0e-176 621.3 399 76.2
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 2.4e-170 602.4 362 79.6
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 4.9e-147 525.0 349 71.3
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 6.6e-144 514.6 390 64.1
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 7.3e-143 511.1 332 72.0
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 6.8e-141 504.6 334 69.5
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 1.5e-140 503.4 334 69.5
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 1.5e-140 503.4 335 69.3
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 5.8e-140 501.5 350 66.6
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 9.2e-138 494.2 332 69.3
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 9.2e-138 494.2 332 70.2
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 9.2e-138 494.2 332 70.2
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 1.2e-137 493.8 355 66.5
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 7.8e-137 491.1 392 62.0
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 6.6e-136 488.0 338 68.0
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.5e-135 486.9 394 62.2
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 1.5e-135 486.9 340 69.4
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 5.6e-135 485.0 353 66.6
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 1.2e-134 483.8 372 63.7
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 4.7e-134 481.9 331 67.1
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 1.4e-133 480.3 319 69.0
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 1.4e-133 480.3 361 62.0
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 1.8e-133 479.9 368 61.4
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 8.9e-133 477.6 384 63.3
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 7.6e-132 474.6 332 67.8
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 1.3e-131 473.8 330 67.9
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 1.7e-131 473.4 354 63.0
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 2.2e-131 473.0 345 67.5
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 2.9e-131 472.6 331 67.7
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 2.9e-131 472.6 347 66.0
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 6.4e-131 471.5 347 63.7
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 1.1e-130 470.7 340 65.9
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 1.9e-130 469.9 347 63.7
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 2.4e-130 469.5 332 67.5
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 3.2e-130 469.2 329 65.7
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 3.2e-130 469.2 332 66.0
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 4.2e-130 468.8 346 65.6
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 4.2e-130 468.8 325 67.4
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 5.4e-130 468.4 332 65.7
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 1.2e-129 467.2 345 64.3
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 1.2e-129 467.2 332 66.0
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 1.6e-129 466.8 332 65.4
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 2.1e-129 466.5 336 66.4
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 6.0e-129 464.9 329 67.5
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 1.0e-128 464.2 383 60.6
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 1.3e-128 463.8 329 67.5
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 5.1e-128 461.8 381 60.4
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 1.1e-127 460.7 340 65.0
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 1.1e-127 460.7 347 63.1
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 3.3e-127 459.1 342 63.2
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 3.6e-126 455.7 326 65.6
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 6.2e-126 454.9 328 66.5
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 8.1e-126 454.5 333 65.5
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 8.1e-126 454.5 333 65.5
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 4.0e-125 452.2 326 62.6
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 5.3e-125 451.8 333 65.2
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 1.5e-124 450.3 333 64.9
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 2.0e-124 449.9 331 65.6
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 3.4e-124 449.1 333 64.6
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 3.4e-124 449.1 327 65.4
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 7.6e-124 448.0 333 65.2
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 7.6e-124 448.0 309 68.6
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 2.2e-123 446.4 333 64.6
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 6.4e-123 444.9 333 64.3
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 6.4e-123 444.9 333 64.3
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 6.4e-123 444.9 347 63.1
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 6.4e-123 444.9 333 65.5
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 3.2e-122 442.6 326 64.4
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 5.4e-122 441.8 333 64.3
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 3.5e-121 439.1 373 57.6
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 2.5e-119 433.0 328 63.4
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 4.0e-117 425.6 331 61.9
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 2.6e-116 422.9 333 60.7
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 7.6e-116 421.4 354 59.6
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 1.9e-114 416.8 357 58.5
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 2.3e-112 409.8 322 62.4
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 3.9e-112 409.1 331 58.3
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 1.1e-111 407.5 418 50.0
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 4.5e-108 395.6 345 57.7
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 7.6e-108 394.8 493 44.6
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 4.2e-106 389.0 345 56.8
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 1.2e-105 387.5 332 56.9
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 1.6e-105 387.1 330 58.2
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 1.8e-104 383.6 278 66.5
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 2.3e-104 383.3 261 66.3
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 2.5e-103 379.8 333 58.0
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 9.6e-103 377.9 276 63.8
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 5.9e-100 368.6 259 66.8
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 4.6e-97 359.0 343 54.2
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 3.9e-96 355.9 241 68.5
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 1.8e-93 347.1 232 71.1
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 1.2e-92 344.4 238 68.5
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 2.2e-86 323.6 234 63.2
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 4.8e-86 322.4 335 48.4
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 1.8e-85 320.5 322 47.8
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.0e-80 304.7 331 47.4
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 1.8e-80 303.9 389 44.5
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 2.5e-74 283.5 324 44.4
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 3.0e-72 276.6 164 75.6
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 1.1e-69 268.1 171 70.2
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 6.5e-59 232.3 351 38.5
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 7.8e-36 155.6 143 54.5
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 3.6e-33 146.7 101 68.3
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 2.2e-30 137.5 78 82.1
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 1.0e-27 128.6 101 65.3
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 3.3e-18 97.1 75 61.3
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 1.4e-16 91.7 97 51.5
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 3.0e-11 73.9 59 55.9
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 3.3e-10 70.5 39 79.5
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.4e-08 65.1 47 59.6
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 1.7e-06 58.2 62 50.0


User provided reference genes

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