Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0555801 Helianthus annuus HOM05D004865 ORTHO05D005949 3.3e-127 458.4 227 100.0
HanXRQChr17g0555831 Helianthus annuus HOM05D004865 ORTHO05D005949 8.0e-126 453.8 227 99.6
HanXRQChr03g0060861 Helianthus annuus HOM05D004865 ORTHO05D005949 2.2e-46 189.9 224 50.0
HanXRQChr03g0060851 Helianthus annuus HOM05D004865 ORTHO05D005949 5.3e-45 185.3 196 52.0
ECA233G5215 Erigeron canadensis HOM05D004865 ORTHO05D005949 2.6e-44 183.0 195 51.3
ECA233G2698 Erigeron canadensis HOM05D004865 ORTHO05D005949 2.2e-43 179.9 202 49.0
ECA233G6014 Erigeron canadensis HOM05D004865 ORTHO05D005949 1.4e-37 160.6 225 42.2
ECA233G0596 Erigeron canadensis HOM05D004865 ORTHO05D000001 2.5e-34 149.8 183 45.4
ECA233G1731 Erigeron canadensis HOM05D004865 ORTHO05D005949 1.3e-30 137.5 145 48.3
ECA233G5781 Erigeron canadensis HOM05D004865 ORTHO05D005949 2.9e-27 126.3 138 49.3
HanXRQChr14g0461501 Helianthus annuus HOM05D004865 ORTHO05D005949 8.8e-24 114.8 93 60.2
Lsat_1_v5_gn_0_11001 Lactuca sativa HOM05D004865 ORTHO05D005949 3.4e-23 112.8 195 35.9
HanXRQChr14g0437021 Helianthus annuus HOM05D000041 ORTHO05D000452 4.4e-23 112.5 210 34.8
MD09G1162600 Malus domestica HOM05D004865 ORTHO05D005949 1.4e-21 107.5 205 38.0
ECA233G0690 Erigeron canadensis HOM05D000041 ORTHO05D000452 2.4e-21 106.7 212 32.5
Lsat_1_v5_gn_8_2701 Lactuca sativa HOM05D000041 ORTHO05D000452 7.0e-21 105.1 212 34.0
ClCG11G000590 Citrullus lanatus HOM05D004865 ORTHO05D005949 1.2e-20 104.4 165 42.4
ClCG03G011140 Citrullus lanatus HOM05D004865 ORTHO05D005949 7.7e-20 101.7 207 37.7
Lsat_1_v5_gn_6_87560 Lactuca sativa HOM05D004865 ORTHO05D005949 1.3e-19 100.9 202 35.6
MD09G1162700 Malus domestica HOM05D004865 ORTHO05D005949 1.7e-19 100.5 140 44.3
MD17G1147700 Malus domestica HOM05D004865 ORTHO05D005949 3.8e-19 99.4 142 42.3
CsaV3_1G044030 Cucumis sativus L. HOM05D004865 ORTHO05D005949 5.0e-19 99.0 140 42.9
ClCG11G000680 Citrullus lanatus HOM05D004865 ORTHO05D005949 6.6e-19 98.6 213 36.6
MD09G1162900 Malus domestica HOM05D004865 ORTHO05D005949 6.6e-19 98.6 212 37.3
MD09G1163100 Malus domestica HOM05D004865 ORTHO05D005949 6.6e-19 98.6 210 34.3
Sed0022242 Sechium edule HOM05D004865 ORTHO05D005949 8.6e-19 98.2 209 35.9
Lj3A898T31 Lonicera japonica HOM05D004865 ORTHO05D005949 4.3e-18 95.9 149 42.3
MELO3C010083.2 Cucumis melo HOM05D004865 ORTHO05D005949 7.2e-18 95.1 207 33.8
ClCG03G011170 Citrullus lanatus HOM05D004865 ORTHO05D005949 1.6e-17 94.0 212 37.7
HanXRQChr13g0416741 Helianthus annuus HOM05D004865 ORTHO05D005949 2.1e-17 93.6 200 34.0
HanXRQChr13g0416751 Helianthus annuus HOM05D004865 ORTHO05D005949 2.8e-17 93.2 196 33.7
HanXRQChr13g0416771 Helianthus annuus HOM05D004865 ORTHO05D005949 2.8e-17 93.2 196 33.7
HanXRQChr03g0085651 Helianthus annuus HOM05D004865 ORTHO05D005949 3.6e-17 92.8 195 31.8
Gohir.A10G138700 Gossypium hirsutum HOM05D004865 ORTHO05D005949 4.7e-17 92.4 201 33.3
Gohir.D10G128100 Gossypium hirsutum HOM05D004865 ORTHO05D005949 8.0e-17 91.7 199 32.7
Gorai.011G141300 Gossypium raimondii HOM05D004865 ORTHO05D005949 8.0e-17 91.7 199 32.7
Hma1.2p1_1768F.1_g301530 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 1.0e-16 91.3 141 39.0
Prupe.2G116800 Prunus persica HOM05D004865 ORTHO05D005949 5.2e-16 89.0 139 40.3
Prupe.1G577300 Prunus persica HOM05D004865 ORTHO05D005949 1.5e-15 87.4 131 41.2
MD17G1148100 Malus domestica HOM05D004865 ORTHO05D005949 2.0e-15 87.0 142 39.4
MD17G1148200 Malus domestica HOM05D004865 ORTHO05D005949 2.0e-15 87.0 142 39.4
MD05G1102400 Malus domestica HOM05D004865 ORTHO05D005949 2.6e-15 86.7 140 39.3
FAN22G1472 Fragaria x ananassa HOM05D004865 ORTHO05D005949 3.4e-15 86.3 217 31.3
Duzib212G1045 Durio zibethinus HOM05D004865 ORTHO05D005949 5.7e-15 85.5 206 35.0
Ah.14g087230 Amaranthus hybridus HOM05D004865 ORTHO05D005949 7.5e-15 85.1 179 35.8
Zm00001eb137370 Zea mays HOM05D004865 ORTHO05D005949 9.8e-15 84.7 181 34.8
Zm00001eb137430 Zea mays HOM05D004865 ORTHO05D005949 9.8e-15 84.7 179 34.1
Lj6P373T4 Lonicera japonica HOM05D004865 ORTHO05D005949 1.3e-14 84.3 127 38.6
Actinidia30931 Actinidia chinensis HOM05D004865 ORTHO05D005949 1.7e-14 84.0 137 41.6
Sc24g0002410 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.2e-14 83.6 220 31.4
AUR62031151 Chenopodium quinoa HOM05D004865 ORTHO05D005949 3.7e-14 82.8 177 33.9
Sc24g0002420 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.7e-14 82.8 219 32.0
DCAR_016015 Daucus carota HOM05D004865 ORTHO05D005949 6.4e-14 82.0 183 32.8
FAN09G4882 Fragaria x ananassa HOM05D004865 ORTHO05D005949 8.3e-14 81.6 241 30.7
DCAR_015954 Daucus carota HOM05D004865 ORTHO05D005949 1.1e-13 81.3 193 33.7
FvH4_6g36010 Fragaria vesca HOM05D004865 ORTHO05D005949 1.1e-13 81.3 217 30.9
EL10Ac8g20499 Beta vulgaris HOM05D004865 ORTHO05D005949 1.4e-13 80.9 179 34.1
AUR62036568 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.4e-13 80.9 177 33.9
Lj6P379T11 Lonicera japonica HOM05D004865 ORTHO05D005949 3.2e-13 79.7 127 37.8
Actinidia30932 Actinidia chinensis HOM05D004865 ORTHO05D005949 5.4e-13 79.0 137 38.7
Lj6P371T8 Lonicera japonica HOM05D004865 ORTHO05D005949 5.4e-13 79.0 127 36.2
Lj6P378T3 Lonicera japonica HOM05D004865 ORTHO05D005949 7.0e-13 78.6 127 37.0
AUR62027396 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.2e-12 77.8 171 35.1
Sc22g0001730 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.6e-12 77.4 178 30.9
Sc22g0001740 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.6e-12 77.4 209 31.1
FAN02G0162 Fragaria x ananassa HOM05D004865 ORTHO05D005949 2.0e-12 77.0 200 30.5
FAN14G5541 Fragaria x ananassa HOM05D004865 ORTHO05D005949 2.0e-12 77.0 124 38.7
Sc23g0005380 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.5e-12 76.3 201 31.3
Os04g0308500 Oryza sativa ssp. japonica HOM05D004865 ORTHO05D005949 5.9e-12 75.5 176 33.5
Os04g0310100 Oryza sativa ssp. japonica HOM05D004865 ORTHO05D005949 5.9e-12 75.5 176 33.5
Ah.14g087250 Amaranthus hybridus HOM05D004865 ORTHO05D005949 1.0e-11 74.7 148 38.5
Actinidia05767 Actinidia chinensis HOM05D004865 ORTHO05D005949 1.3e-11 74.3 139 35.3
Lj6C375T0 Lonicera japonica HOM05D004865 ORTHO05D005949 2.3e-11 73.6 107 39.3
EL10As6g23632 Beta vulgaris HOM05D004865 ORTHO05D005949 3.9e-11 72.8 218 29.4
FAN14G3467 Fragaria x ananassa HOM05D004865 ORTHO05D005949 3.9e-11 72.8 128 36.7
MD17G1148000 Malus domestica HOM05D004865 ORTHO05D005949 3.9e-11 72.8 182 33.5
Sc22g0001710 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.9e-11 72.8 139 35.3
Sc02g0003580 Simmondsia chinensis HOM05D004865 ORTHO05D005949 5.0e-11 72.4 175 29.1
CSS0032746 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 6.6e-11 72.0 174 31.6
AUR62027395 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.9e-10 70.5 133 39.1
Sc22g0001720 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.9e-10 70.5 116 36.2
Ah.06g181840 Amaranthus hybridus HOM05D004865 ORTHO05D005949 3.3e-10 69.7 145 35.2
Duzib052G0039 Durio zibethinus HOM05D004865 ORTHO05D005949 3.3e-10 69.7 177 32.8
Sc06g0005920 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.3e-10 69.7 140 35.0
CSS0027528 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 4.3e-10 69.3 181 30.9
EL10As6g23631 Beta vulgaris HOM05D004865 ORTHO05D005949 7.3e-10 68.6 218 28.4
AUR62012544 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.2e-09 67.8 220 27.7
MELO3C031484.2 Cucumis melo HOM05D004865 ORTHO05D005949 1.2e-09 67.8 218 29.8
AUR62014652 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.6e-09 67.4 148 33.1
SGA_v2.0_scaffold11G05644 Striga asiatica HOM05D004865 ORTHO05D005949 1.6e-09 67.4 138 34.1
Sc09g0006350 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.8e-09 66.6 188 30.3
Sc22g0001760 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.8e-09 66.6 208 27.9
Lj1P501T11 Lonicera japonica HOM05D004865 ORTHO05D005949 3.6e-09 66.2 116 37.1
Lj1P506T13 Lonicera japonica HOM05D004865 ORTHO05D005949 3.6e-09 66.2 116 37.1
CSS0028314 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 4.7e-09 65.9 169 32.0
AUR62031152 Chenopodium quinoa HOM05D004865 ORTHO05D005949 4.7e-09 65.9 147 34.7
Ah.14g087240 Amaranthus hybridus HOM05D004865 ORTHO05D005949 8.0e-09 65.1 148 33.1
AUR62036569 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.0e-08 64.7 159 32.7
DCAR_015955 Daucus carota HOM05D004865 ORTHO05D005949 1.4e-08 64.3 149 34.2
AUR62012571 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.3e-08 63.5 173 30.1
Sc09g0006330 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.3e-08 63.5 156 32.1
AUR62014649 Chenopodium quinoa HOM05D004865 ORTHO05D005949 3.1e-08 63.2 127 34.6
Lj1P506T10 Lonicera japonica HOM05D004865 ORTHO05D005949 3.1e-08 63.2 125 35.2
Lj1P515T6 Lonicera japonica HOM05D004865 ORTHO05D005949 3.1e-08 63.2 125 35.2
Sc09g0006530 Simmondsia chinensis HOM05D004865 ORTHO05D005949 4.0e-08 62.8 156 32.1
AUR62044724 Chenopodium quinoa HOM05D004865 ORTHO05D005949 6.8e-08 62.0 128 35.2
Cre07.g321800 Chlamydomonas reinhardtii HOM05D004865 ORTHO05D005949 6.8e-08 62.0 205 32.2
CsaV3_4G030090 Cucumis sativus L. HOM05D004865 ORTHO05D005949 1.2e-07 61.2 52 51.9
Hma1.2p1_0543F.1_g175180 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 1.2e-07 61.2 146 33.6
Hma1.2p1_3336F.1_g335335 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 1.2e-07 61.2 146 33.6
CSS0005385 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 1.5e-07 60.8 142 33.8
ClCG11G011710 Citrullus lanatus HOM05D004865 ORTHO05D034719 1.5e-07 60.8 217 29.0
Sc16g0002960 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.0e-07 60.5 94 36.2
Sc17g0004370 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.0e-07 60.5 141 31.9
Sc24g0002440 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.0e-07 60.5 160 28.8
SGA_v2.0_scaffold163G38046 Striga asiatica HOM05D004865 ORTHO05D005949 2.0e-07 60.5 242 28.1
DCAR_016016 Daucus carota HOM05D004865 ORTHO05D005949 2.6e-07 60.1 119 34.5
Ah.14g087270 Amaranthus hybridus HOM05D004865 ORTHO05D005949 4.4e-07 59.3 116 37.1
Sed0006015 Sechium edule HOM05D004865 ORTHO05D034719 4.4e-07 59.3 217 25.8
Sc22g0001750 Simmondsia chinensis HOM05D004865 ORTHO05D005949 4.4e-07 59.3 196 27.0
EL10Ac8g20500 Beta vulgaris HOM05D004865 ORTHO05D005949 5.8e-07 58.9 125 36.0
Sc09g0006340 Simmondsia chinensis HOM05D004865 ORTHO05D005949 5.8e-07 58.9 135 34.8
Lj1P314T6 Lonicera japonica HOM05D004865 ORTHO05D005949 7.5e-07 58.5 118 33.9
SGA_v2.0_scaffold11G05649 Striga asiatica HOM05D004865 ORTHO05D005949 1.7e-06 57.4 100 35.0
Sed0001554 Sechium edule HOM05D004865 ORTHO05D034719 2.2e-06 57.0 210 26.2
Sc16g0002940 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.2e-06 57.0 108 35.2
Lj1P308T9 Lonicera japonica HOM05D004865 ORTHO05D005949 8.3e-06 55.1 116 34.5


User provided reference genes

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