Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0535531 Helianthus annuus HOM05D007897 ORTHO05D010061 2.3e-221 772.3 501 100.0
HanXRQChr01g0022031 Helianthus annuus HOM05D007897 ORTHO05D010061 3.4e-209 731.9 501 96.4
Lsat_1_v5_gn_1_70121 Lactuca sativa HOM05D007897 ORTHO05D010061 8.8e-133 478.0 497 69.8
ECA248G1461 Erigeron canadensis HOM05D007897 ORTHO05D010061 2.6e-132 476.5 499 70.9
TWI23G0094 Tripterygium wilfordii HOM05D007897 ORTHO05D010061 4.6e-73 279.6 459 58.2
CSS0029276 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 1.9e-71 274.2 493 56.0
Dinv32167 Davidia involucrata HOM05D007897 ORTHO05D010061 1.9e-71 274.2 497 56.1
COL.COLO4_35959 Corchorus olitorius HOM05D007897 ORTHO05D010061 7.1e-66 255.8 460 50.7
TAR633G2399 Trochodendron aralioides HOM05D007897 ORTHO05D010061 1.2e-65 255.0 477 56.4
Thecc.04G191100 Theobroma cacao HOM05D007897 ORTHO05D010061 3.5e-65 253.4 463 55.7
TAR633G2792 Trochodendron aralioides HOM05D007897 ORTHO05D010061 1.3e-64 251.5 497 53.7
Manes.05G198900 Manihot esculenta HOM05D007897 ORTHO05D010061 1.1e-63 248.4 496 54.2
Cpa.g.sc157.16 Carica papaya HOM05D007897 ORTHO05D010061 1.5e-63 248.1 487 54.8
Duzib212G0894 Durio zibethinus HOM05D007897 ORTHO05D010061 1.9e-63 247.7 435 49.9
Cc03_g09150 Coffea canephora HOM05D007897 ORTHO05D010061 1.6e-62 244.6 493 54.2
PSO017G4232 Papaver somniferum HOM05D007897 ORTHO05D010061 4.8e-62 243.0 496 46.0
Gohir.D09G201400 Gossypium hirsutum HOM05D007897 ORTHO05D010061 1.8e-61 241.1 429 51.7
QL06p027281 Quercus lobata HOM05D007897 ORTHO05D010061 2.4e-61 240.7 427 58.3
CARHR220230 Cardamine hirsuta HOM05D007897 ORTHO05D010061 3.1e-61 240.4 445 53.9
Sed0009503 Sechium edule HOM05D007897 ORTHO05D010061 3.1e-61 240.4 468 54.1
Gorai.006G225200 Gossypium raimondii HOM05D007897 ORTHO05D010061 4.0e-61 240.0 429 51.5
HanXRQChr09g0243521 Helianthus annuus HOM05D007897 ORTHO05D010061 1.5e-60 238.0 121 95.0
Lalb_Chr03g0036571 Lupinus albus HOM05D007897 ORTHO05D010061 4.4e-60 236.5 454 47.1
Ciclev10004784m.g Citrus clementina HOM05D007897 ORTHO05D010061 7.6e-60 235.7 446 55.6
PSO063G5193 Papaver somniferum HOM05D007897 ORTHO05D010061 9.9e-60 235.3 488 45.7
BcaB08g35766 Brassica carinata HOM05D007897 ORTHO05D010061 2.9e-59 233.8 490 52.0
AL7G42190 Arabidopsis lyrata HOM05D007897 ORTHO05D010061 1.1e-58 231.9 442 54.1
Carub.0007s2820 Capsella rubella HOM05D007897 ORTHO05D010061 3.2e-58 230.3 434 53.2
Sabra14G0112700 Salix brachista HOM05D007897 ORTHO05D010061 3.2e-58 230.3 462 53.9
C09p44340 Brassica napus HOM05D007897 ORTHO05D010061 1.3e-56 224.9 458 52.8
Thhalv10027442m.g Eutrema salsugineum HOM05D007897 ORTHO05D010061 2.3e-56 224.2 505 50.3
A10p11440 Brassica napus HOM05D007897 ORTHO05D010061 3.0e-56 223.8 467 52.9
Nn8g41262 Nelumbo nucifera HOM05D007897 ORTHO05D010061 3.9e-56 223.4 487 52.0
BraA10t43238Z Brassica rapa HOM05D007897 ORTHO05D010061 5.1e-56 223.0 467 52.7
Eucgr.L00640 Eucalyptus grandis HOM05D007897 ORTHO05D010061 5.1e-56 223.0 502 41.8
AT4G14190 Arabidopsis thaliana HOM05D007897 ORTHO05D010061 5.6e-55 219.5 500 49.8
THA.LOC104808674 Tarenaya hassleriana HOM05D007897 ORTHO05D010061 9.6e-55 218.8 462 52.2
Cfa008662 Carpinus fangiana HOM05D007897 ORTHO05D010061 2.1e-54 217.6 491 52.5
VMungo1383G3288 Vigna mungo HOM05D007897 ORTHO05D010061 6.2e-54 216.1 443 54.4
BolC9t57304H Brassica oleracea HOM05D007897 ORTHO05D010061 8.1e-54 215.7 467 52.7
arahy.Tifrunner.gnm1.ann1.T7EAWL Arachis hypogaea HOM05D007897 ORTHO05D010061 1.8e-53 214.5 424 57.1
MD04G1021700 Malus domestica HOM05D007897 ORTHO05D010061 4.0e-53 213.4 505 49.5
arahy.Tifrunner.gnm1.ann1.TEUF1S Arachis hypogaea HOM05D007897 ORTHO05D010061 5.3e-53 213.0 424 56.6
Phvul.001G265200 Phaseolus vulgaris HOM05D007897 ORTHO05D010061 5.3e-53 213.0 442 54.1
Haze_11681 Corylus avellana HOM05D007897 ORTHO05D010061 9.0e-53 212.2 487 52.2
Sp6g16180 Schrenkiella parvula HOM05D007897 ORTHO05D010061 1.2e-52 211.8 426 54.0
FvH4_4g12861 Fragaria vesca HOM05D007897 ORTHO05D010061 4.5e-52 209.9 469 51.6
CSS0018651 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 1.1e-50 205.3 383 59.5
CANSAT78G0179 Cannabis sativa HOM05D007897 ORTHO05D010061 1.1e-50 205.3 461 51.8
PGR142G1366 Punica granatum HOM05D007897 ORTHO05D010061 1.9e-50 204.5 497 40.2
Glyma.18G003400 Glycine max HOM05D007897 ORTHO05D010061 5.4e-50 203.0 454 52.6
MBI07_g06195_MAGBIO Magnolia biondii HOM05D007897 ORTHO05D010061 1.6e-49 201.4 439 54.0
FAN07G0261 Fragaria x ananassa HOM05D005839 ORTHO05D005686 4.6e-49 199.9 483 50.1
ATR0807G097 Amborella trichopoda HOM05D007897 ORTHO05D010061 6.7e-48 196.1 423 53.4
RcHm_v2.0_Chr4g0412521 Rosa chinensis HOM05D007897 ORTHO05D010061 1.1e-47 195.3 482 49.8
CiPaw.02G062400 Carya illinoinensis HOM05D007897 ORTHO05D010061 9.6e-47 192.2 189 52.4
Gohir.A09G207900 Gossypium hirsutum HOM05D007897 ORTHO05D010061 2.1e-46 191.0 192 51.6
Glyma.11G253700 Glycine max HOM05D007897 ORTHO05D010061 4.0e-45 186.8 468 50.0
Potri.014G149500 Populus trichocarpa HOM05D007897 ORTHO05D010061 1.3e-43 181.8 196 47.4
Atru.chr3.1764 Acer truncatum HOM05D007897 ORTHO05D010061 2.2e-43 181.0 180 50.6
BcaC04g20377 Brassica carinata HOM05D007897 ORTHO05D010061 7.1e-42 176.0 467 49.0
Aa31LG9G3200 Aethionema arabicum HOM05D007897 ORTHO05D010061 9.3e-42 175.6 488 47.1
Oeu050723.3 Olea europaea HOM05D007897 ORTHO05D009229 2.1e-41 174.5 170 51.8
Oeu050722.1 Olea europaea HOM05D005839 ORTHO05D009229 6.7e-40 169.5 185 47.0
FAN22G1341 Fragaria x ananassa HOM05D007897 ORTHO05D010061 2.4e-37 161.0 179 46.4
HPP92_007232 Vanilla planifolia HOM05D007897 ORTHO05D010061 1.3e-35 155.2 423 50.6
FAN17G1799 Fragaria x ananassa HOM05D005839 ORTHO05D005686 6.5e-35 152.9 385 54.5
HanXRQChr09g0243531 Helianthus annuus HOM05D007897 ORTHO05D010061 1.3e-32 145.2 83 89.2
Manes.05G199032 Manihot esculenta HOM05D007897 ORTHO05D010061 1.1e-29 135.6 349 57.9
arahy.Tifrunner.gnm1.ann1.EZRM4Y Arachis hypogaea HOM05D007897 ORTHO05D010061 1.8e-24 118.2 358 55.6
Prupe.1G171300 Prunus persica HOM05D007897 ORTHO05D010061 6.5e-19 99.8 166 36.7
Thhalv10027431m.g Eutrema salsugineum HOM05D007897 ORTHO05D010061 8.8e-16 89.4 106 41.5
Nn5g27062 Nelumbo nucifera HOM05D007036 ORTHO05D008885 1.0e-11 75.9 201 29.4
PGSC0003DMG400013697 Solanum tuberosum HOM05D007036 ORTHO05D008885 5.0e-11 73.6 203 30.0
Nitab4.5_0000404g0190 Nicotiana tabacum HOM05D007036 ORTHO05D008885 6.5e-11 73.2 203 30.0
Peaxi162Scf00954g00025 Petunia axillaris HOM05D007036 ORTHO05D008885 6.5e-11 73.2 199 28.1
Lj5P749T15 Lonicera japonica HOM05D007036 ORTHO05D008885 1.1e-10 72.4 193 25.9
MSTRG.5959 Avicennia marina HOM05D007036 ORTHO05D008885 1.5e-10 72.0 201 26.4
Duzib168G0358 Durio zibethinus HOM05D007036 ORTHO05D008885 1.9e-10 71.6 195 30.3
Sopen05g027850 Solanum pennellii HOM05D007036 ORTHO05D008885 1.9e-10 71.6 197 29.9
CAN.G106.6 Capsicum annuum HOM05D007036 ORTHO05D008885 2.5e-10 71.2 203 30.5
TAR636G0074 Trochodendron aralioides HOM05D007036 ORTHO05D008885 4.2e-10 70.5 197 27.9
HPP92_028312 Vanilla planifolia HOM05D007036 ORTHO05D008885 1.2e-09 68.9 201 29.4
Lj2g0012301 Lotus japonicus HOM05D007036 ORTHO05D008885 1.6e-09 68.6 200 27.5
ATR0626G201 Amborella trichopoda HOM05D007036 ORTHO05D008885 2.7e-09 67.8 204 28.4
unitig_26.g9126 Utricularia gibba HOM05D007036 ORTHO05D008885 3.6e-09 67.4 204 27.9
Ciclev10010414m.g Citrus clementina HOM05D007036 ORTHO05D008885 4.7e-09 67.0 204 28.4
Migut.J00838 Erythranthe guttata HOM05D007036 ORTHO05D008885 6.1e-09 66.6 201 26.9
PGR083G2517 Punica granatum HOM05D007036 ORTHO05D008885 1.0e-08 65.9 203 27.6
arahy.Tifrunner.gnm1.ann1.UBG147 Arachis hypogaea HOM05D007036 ORTHO05D008885 1.4e-08 65.5 195 28.2
arahy.Tifrunner.gnm1.ann1.1YAE55 Arachis hypogaea HOM05D007036 ORTHO05D008885 2.3e-08 64.7 195 27.7
Gohir.A06G110000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 3.0e-08 64.3 197 27.9
Gohir.D06G112000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 3.0e-08 64.3 197 27.9
Gorai.010G127600 Gossypium raimondii HOM05D007036 ORTHO05D008885 4.0e-08 63.9 197 27.9
Thecc.09G196200 Theobroma cacao HOM05D007036 ORTHO05D008885 4.0e-08 63.9 202 26.7
Zm00001eb035670 Zea mays HOM05D007036 ORTHO05D008885 1.1e-07 62.4 192 29.7
Cpa.g.sc115.26 Carica papaya HOM05D007036 ORTHO05D008885 1.5e-07 62.0 201 26.4
Gorai.002G182100 Gossypium raimondii HOM05D007897 ORTHO05D010061 2.0e-07 61.6 88 39.8
PSO170G3146 Papaver somniferum HOM05D007036 ORTHO05D008885 2.0e-07 61.6 205 27.8
Sabra18G0121200 Salix brachista HOM05D007036 ORTHO05D008885 3.3e-07 60.8 196 25.0
Sabra18G0128300 Salix brachista HOM05D007036 ORTHO05D008885 3.3e-07 60.8 196 25.0
Gohir.D01G146401 Gossypium hirsutum HOM05D007897 ORTHO05D010061 7.4e-07 59.7 89 39.3
A02p10540 Brassica napus HOM05D007897 ORTHO05D010061 2.2e-06 58.2 63 39.7
Gorai.001G135500 Gossypium raimondii HOM05D007897 ORTHO05D010061 2.2e-06 58.2 87 42.5
FAN22G1963 Fragaria x ananassa HOM05D007897 ORTHO05D010061 2.8e-06 57.8 77 40.3
Gohir.D07G125650 Gossypium hirsutum HOM05D007897 ORTHO05D010061 4.8e-06 57.0 84 42.9


User provided reference genes

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