Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0491141 Helianthus annuus HOM05D006326 ORTHO05D007589 1.2e-138 496.9 332 100.0
ECA247G0820 Erigeron canadensis HOM05D006326 ORTHO05D007589 8.5e-76 288.1 375 57.3
Lsat_1_v5_gn_9_29721 Lactuca sativa HOM05D006326 ORTHO05D007589 5.2e-73 278.9 390 52.8
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 1.4e-49 201.1 225 57.8
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 2.2e-47 193.7 237 54.4
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 4.9e-47 192.6 233 54.9
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 1.7e-44 184.1 225 53.8
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 6.6e-44 182.2 279 46.6
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 1.9e-43 180.6 217 56.7
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 1.2e-42 177.9 232 50.9
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 2.1e-42 177.2 224 52.7
RcHm_v2.0_Chr6g0276151 Rosa chinensis HOM05D006326 ORTHO05D007589 1.4e-41 174.5 222 54.1
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 4.0e-41 172.9 203 55.2
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 3.4e-40 169.9 246 48.0
Solyc12g020000.3 Solanum lycopersicum HOM05D006326 ORTHO05D007589 3.4e-40 169.9 221 54.3
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 5.8e-40 169.1 228 54.4
Haze_20235 Corylus avellana HOM05D006326 ORTHO05D007589 7.5e-40 168.7 234 49.1
VMungo0720G1800 Vigna mungo HOM05D006326 ORTHO05D007589 1.7e-39 167.5 214 50.9
FAN20G2839 Fragaria x ananassa HOM05D006326 ORTHO05D007589 2.9e-39 166.8 270 46.7
COL.COLO4_37458 Corchorus olitorius HOM05D006326 ORTHO05D007589 3.7e-39 166.4 237 49.4
Gorai.006G132800 Gossypium raimondii HOM05D006326 ORTHO05D007589 3.7e-39 166.4 218 52.3
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 8.3e-39 165.2 415 42.4
FvH4_2g14070 Fragaria vesca HOM05D006326 ORTHO05D007589 1.1e-38 164.9 220 50.9
Gohir.D09G115200 Gossypium hirsutum HOM05D006326 ORTHO05D007589 1.1e-38 164.9 218 52.8
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 1.4e-38 164.5 226 51.3
FAN15G3215 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.9e-38 164.1 220 52.3
Phvul.007G233400 Phaseolus vulgaris HOM05D006326 ORTHO05D007589 1.9e-38 164.1 219 51.1
Lj5g0016845 Lotus japonicus HOM05D006326 ORTHO05D007589 2.4e-38 163.7 222 52.3
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 5.4e-38 162.5 132 70.5
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 5.4e-38 162.5 166 63.9
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 5.4e-38 162.5 166 63.9
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 1.2e-37 161.4 203 52.2
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 1.2e-37 161.4 225 52.0
ClCG04G005630 Citrullus lanatus HOM05D006326 ORTHO05D007589 1.6e-37 161.0 155 61.3
Hma1.2p1_0252F.1_g102780 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 1.6e-37 161.0 225 49.8
Thecc.05G128800 Theobroma cacao HOM05D006326 ORTHO05D007589 1.6e-37 161.0 227 49.8
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 2.1e-37 160.6 221 49.3
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 2.1e-37 160.6 223 49.3
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 2.1e-37 160.6 223 49.3
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 2.7e-37 160.2 188 55.9
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 3.5e-37 159.8 192 53.6
Carub.0005s2347 Capsella rubella HOM05D006326 ORTHO05D007589 4.6e-37 159.5 204 52.9
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 7.8e-37 158.7 242 51.2
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 1.0e-36 158.3 228 52.6
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 2.3e-36 157.1 224 48.7
AL5G38090 Arabidopsis lyrata HOM05D006326 ORTHO05D007589 3.9e-36 156.4 257 42.4
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 1.9e-35 154.1 224 48.2
Lalb_Chr02g0156611 Lupinus albus HOM05D006326 ORTHO05D007589 5.6e-35 152.5 195 53.8
ATR0317G072 Amborella trichopoda HOM05D006326 ORTHO05D007589 9.5e-35 151.8 213 48.8
CARHR166860 Cardamine hirsuta HOM05D006326 ORTHO05D007589 1.2e-34 151.4 388 34.8
Ah.13g076820 Amaranthus hybridus HOM05D002003 ORTHO05D002037 3.6e-34 149.8 209 49.3
BcaC07g39981 Brassica carinata HOM05D006326 ORTHO05D007589 8.1e-34 148.7 137 63.5
Medtr1g050510 Medicago truncatula HOM05D006326 ORTHO05D007589 1.4e-33 147.9 213 48.8
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 1.8e-33 147.5 240 45.8
DCAR_013645 Daucus carota HOM05D002003 ORTHO05D002037 3.1e-33 146.7 214 45.8
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 3.1e-33 146.7 401 35.7
BolC8t50813H Brassica oleracea HOM05D006326 ORTHO05D007589 4.0e-33 146.4 205 49.3
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 5.2e-33 146.0 200 53.5
Ca_05361_v3 Cicer arietinum L. HOM05D006326 ORTHO05D007589 6.8e-33 145.6 435 35.4
Psat6g129480 Pisum sativum HOM05D006326 ORTHO05D007589 8.9e-33 145.2 407 34.6
BcaC07g40122 Brassica carinata HOM05D006326 ORTHO05D007589 1.2e-32 144.8 233 46.8
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 1.5e-32 144.4 115 67.0
HPP92_019182 Vanilla planifolia HOM05D006326 ORTHO05D007589 2.0e-32 144.1 123 67.5
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 2.6e-32 143.7 371 40.4
SGA_v2.0_scaffold1000G53781 Striga asiatica HOM05D006326 ORTHO05D007589 3.4e-32 143.3 115 66.1
arahy.Tifrunner.gnm1.ann1.Z1KKER Arachis hypogaea HOM05D006326 ORTHO05D007589 3.8e-31 139.8 203 49.3
EL10Ac3g07247 Beta vulgaris HOM05D006326 ORTHO05D007589 4.9e-31 139.4 222 46.4
Sp5g05840 Schrenkiella parvula HOM05D006326 ORTHO05D007589 4.9e-31 139.4 406 33.5
Hund19089 Selenicereus undatus HOM05D006326 ORTHO05D007589 1.1e-30 138.3 254 42.9
arahy.Tifrunner.gnm1.ann1.0NJ1V1 Arachis hypogaea HOM05D006326 ORTHO05D007589 3.2e-30 136.7 216 46.8
Aa31LG10G11560 Aethionema arabicum HOM05D006326 ORTHO05D007589 7.1e-30 135.6 416 32.0
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 1.2e-29 134.8 111 69.4
CAN.G51.3 Capsicum annuum HOM05D006326 ORTHO05D007589 2.1e-29 134.0 233 45.5
CDE04G2458 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 6.0e-29 132.5 202 46.5
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 3.0e-28 130.2 225 44.0
SEGI_11590 Sequoiadendron giganteum HOM05D006326 ORTHO05D007589 1.9e-27 127.5 161 54.0
Mapoly0069s0088 Marchantia polymorpha HOM05D006326 ORTHO05D007589 4.3e-27 126.3 126 60.3
TPR.G7607 Trifolium pratense HOM05D006326 ORTHO05D007589 4.3e-27 126.3 185 48.6
AagrBONN_evm.TU.Sc2ySwM_344.979 Anthoceros agrestis HOM05D006326 ORTHO05D007589 2.1e-26 124.0 166 50.6
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 4.0e-25 119.8 219 42.0
Pp3c14_4840 Physcomitrium patens HOM05D006326 ORTHO05D007589 3.4e-24 116.7 188 46.8
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 2.2e-23 114.0 159 49.1
CiPaw.10G040500 Carya illinoinensis HOM05D006326 ORTHO05D007589 3.8e-23 113.2 222 36.9
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 1.1e-22 111.7 183 42.1
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 4.2e-22 109.8 174 46.6
Glyma.10G102200 Glycine max HOM05D006326 ORTHO05D007589 5.4e-22 109.4 168 47.0
FAN24G3485 Fragaria x ananassa HOM05D006326 ORTHO05D007589 7.1e-22 109.0 170 43.5
Glyma.02G166100 Glycine max HOM05D006326 ORTHO05D007589 7.1e-22 109.0 159 45.3
Gohir.A09G118300 Gossypium hirsutum HOM05D006326 ORTHO05D007589 2.7e-21 107.1 170 45.3
MELO3C019097.2 Cucumis melo HOM05D006326 ORTHO05D007589 6.6e-20 102.4 131 48.1
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 6.6e-20 102.4 121 47.9
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 8.7e-20 102.1 164 44.5
Actinidia01833 Actinidia chinensis HOM05D006326 ORTHO05D007589 1.1e-19 101.7 73 75.3
CBR_g50470 Chara braunii HOM05D006326 ORTHO05D007589 1.1e-19 101.7 214 40.2
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 1.5e-19 101.3 133 48.1
Sed0018260 Sechium edule HOM05D006326 ORTHO05D007589 2.5e-19 100.5 238 39.1
A09p49570 Brassica napus HOM05D006326 ORTHO05D007589 3.3e-19 100.1 99 54.5
BraA09t40410Z Brassica rapa HOM05D006326 ORTHO05D007589 3.3e-19 100.1 99 54.5
THA.LOC104815890 Tarenaya hassleriana HOM05D006326 ORTHO05D007589 3.3e-19 100.1 180 40.0
Cc06_g19610 Coffea canephora HOM05D006326 ORTHO05D007589 5.6e-19 99.4 129 49.6
Pp3c1_21670 Physcomitrium patens HOM05D006326 ORTHO05D007589 5.6e-19 99.4 110 55.5
CANSAT64G1393 Cannabis sativa HOM05D006326 ORTHO05D007589 1.3e-18 98.2 227 36.1
Duzib128G1973 Durio zibethinus HOM05D006326 ORTHO05D007589 2.1e-18 97.4 180 38.3
TWI53G1954 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 5.3e-17 92.8 133 45.1
Medtr0722s0010 Medicago truncatula HOM05D006326 ORTHO05D007589 9.0e-17 92.0 75 72.0
PSO384G3095 Papaver somniferum HOM05D006326 ORTHO05D007589 1.5e-16 91.3 154 43.5
Sc13g0001090 Simmondsia chinensis HOM05D006326 ORTHO05D007589 2.0e-16 90.9 167 38.9
SMO351G0508 Selaginella moellendorffii HOM05D006326 ORTHO05D007589 3.4e-16 90.1 199 37.2
Zm00001eb185630 Zea mays HOM05D006326 ORTHO05D007589 4.5e-16 89.7 75 66.7
PSO339G2802 Papaver somniferum HOM05D006326 ORTHO05D007589 4.9e-15 86.3 154 41.6
Thhalv10005957m.g Eutrema salsugineum HOM05D006326 ORTHO05D007589 3.5e-13 80.1 366 29.0
Eucgr.B03116 Eucalyptus grandis HOM05D006326 ORTHO05D007589 1.3e-12 78.2 200 35.5
CSS0022371 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 8.7e-12 75.5 64 62.5
PGR142G2735 Punica granatum HOM05D006326 ORTHO05D007589 9.0e-09 65.5 170 35.9
Mapoly0021s0060 Marchantia polymorpha HOM05D006326 ORTHO05D007589 3.4e-08 63.5 101 41.6
SGA_v2.0_scaffold66G22262 Striga asiatica HOM05D006326 ORTHO05D007589 1.4e-06 58.2 59 54.2


User provided reference genes

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