Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0490081 Helianthus annuus HOM05D008002 ORTHO05D010148 5.0e-63 244.2 117 100.0
Lsat_1_v5_gn_3_48401 Lactuca sativa HOM05D008002 ORTHO05D010148 4.0e-44 181.4 115 73.9
Actinidia20583 Actinidia chinensis HOM05D008002 ORTHO05D010148 1.4e-33 146.4 107 60.7
QL11p056798 Quercus lobata HOM05D000114 ORTHO05D009898 3.5e-32 141.7 115 56.5
Actinidia17988 Actinidia chinensis HOM05D008002 ORTHO05D010148 4.5e-32 141.4 107 58.9
GSVIVG01023858001 Vitis vinifera HOM05D008002 ORTHO05D010148 5.9e-32 141.0 111 61.3
HanXRQChr15g0479771 Helianthus annuus HOM05D008002 ORTHO05D010148 1.7e-31 139.4 107 65.4
CiPaw.05G094700 Carya illinoinensis HOM05D008002 ORTHO05D010148 5.0e-31 137.9 118 53.4
MD05G1143100 Malus domestica HOM05D008002 ORTHO05D010148 6.6e-31 137.5 110 60.0
TAR376G1088 Trochodendron aralioides HOM05D008002 ORTHO05D010148 6.6e-31 137.5 111 57.7
ClCG02G003270 Citrullus lanatus HOM05D008002 ORTHO05D010148 9.5e-30 133.7 112 58.0
CiPaw.06G114200 Carya illinoinensis HOM05D008002 ORTHO05D010148 1.2e-29 133.3 115 53.9
RcHm_v2.0_Chr6g0281201 Rosa chinensis HOM05D008002 ORTHO05D010148 1.2e-29 133.3 120 55.8
CsaV3_7G002100 Cucumis sativus L. HOM05D008002 ORTHO05D010148 1.6e-29 132.9 111 58.6
FAN27G2383 Fragaria x ananassa HOM05D008002 ORTHO05D010148 1.6e-29 132.9 120 56.7
Cfa005392 Carpinus fangiana HOM05D008002 ORTHO05D010148 2.8e-29 132.1 107 56.1
Dinv14183 Davidia involucrata HOM05D008002 ORTHO05D010148 2.8e-29 132.1 119 53.8
FAN15G1289 Fragaria x ananassa HOM05D008002 ORTHO05D010148 2.8e-29 132.1 120 55.0
CANSAT25G0111 Cannabis sativa HOM05D008002 ORTHO05D010148 3.6e-29 131.7 112 57.1
MELO3C015697.2 Cucumis melo HOM05D008002 ORTHO05D010148 4.7e-29 131.3 110 54.5
Gohir.D02G193300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 4.7e-29 131.3 121 53.7
Prupe.8G181900 Prunus persica HOM05D008002 ORTHO05D010148 4.7e-29 131.3 108 60.2
TWI75G0824 Tripterygium wilfordii HOM05D008002 ORTHO05D010148 6.1e-29 131.0 106 57.5
Duzib248G0441 Durio zibethinus HOM05D008002 ORTHO05D010148 1.0e-28 130.2 124 50.8
Thecc.02G147800 Theobroma cacao HOM05D008002 ORTHO05D010148 1.0e-28 130.2 125 49.6
FvH4_2g17020 Fragaria vesca HOM05D008002 ORTHO05D010148 1.4e-28 129.8 120 55.8
MD10G1142900 Malus domestica HOM05D008002 ORTHO05D010148 1.4e-28 129.8 111 57.7
Sed0014792 Sechium edule HOM05D008002 ORTHO05D010148 1.4e-28 129.8 112 54.5
COL.COLO4_03847 Corchorus olitorius HOM05D008002 ORTHO05D010148 1.8e-28 129.4 127 48.8
Gorai.013G065000 Gossypium raimondii HOM05D008002 ORTHO05D010148 1.8e-28 129.4 122 54.1
FAN24G1487 Fragaria x ananassa HOM05D008002 ORTHO05D010148 2.3e-28 129.0 115 57.4
Gohir.D04G151600 Gossypium hirsutum HOM05D008002 ORTHO05D010148 2.3e-28 129.0 122 54.1
Gohir.D13G057750 Gossypium hirsutum HOM05D008002 ORTHO05D010148 3.0e-28 128.6 122 53.3
Hund00100 Selenicereus undatus HOM05D008002 ORTHO05D010148 4.0e-28 128.3 112 57.1
Gohir.A03G170200 Gossypium hirsutum HOM05D008002 ORTHO05D010148 5.2e-28 127.9 122 52.5
Gorai.005G216100 Gossypium raimondii HOM05D008002 ORTHO05D010148 5.2e-28 127.9 122 52.5
Gorai.012G138300 Gossypium raimondii HOM05D008002 ORTHO05D010148 6.8e-28 127.5 122 53.3
Rhsim11G0198500 Rhododendron simsii HOM05D008002 ORTHO05D010148 6.8e-28 127.5 126 47.6
Haze_01969 Corylus avellana HOM05D008002 ORTHO05D010148 1.2e-27 126.7 111 53.2
Haze_01959 Corylus avellana HOM05D008002 ORTHO05D010148 1.5e-27 126.3 107 53.3
Gohir.A04G111300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 2.0e-27 125.9 121 53.7
Atru.chr5.3576 Acer truncatum HOM05D008002 ORTHO05D010148 7.5e-27 124.0 119 53.8
Eucgr.I01542 Eucalyptus grandis HOM05D008002 ORTHO05D010148 7.5e-27 124.0 113 54.9
Oeu006116.1 Olea europaea HOM05D008002 ORTHO05D010148 7.5e-27 124.0 126 49.2
PGR142G3621 Punica granatum HOM05D008002 ORTHO05D010148 9.8e-27 123.6 119 51.3
Duzib132G1147 Durio zibethinus HOM05D008002 ORTHO05D010148 2.9e-26 122.1 125 47.2
Potri.004G208200 Populus trichocarpa HOM05D008002 ORTHO05D010148 2.9e-26 122.1 113 52.2
CSS0003373 Camellia sinensis var. sinensis HOM05D008002 ORTHO05D010148 1.1e-25 120.2 109 52.3
Ciclev10029829m.g Citrus clementina HOM05D008002 ORTHO05D010148 1.4e-25 119.8 115 51.3
Nn8g40377 Nelumbo nucifera HOM05D008002 ORTHO05D010148 1.4e-25 119.8 116 50.9
Sabra04G0140100 Salix brachista HOM05D008002 ORTHO05D010148 1.9e-25 119.4 114 50.0
Nn2g12628 Nelumbo nucifera HOM05D008002 ORTHO05D010148 7.8e-24 114.0 116 49.1
Carub.0007s0013 Capsella rubella HOM05D008002 ORTHO05D010148 1.0e-23 113.6 104 53.8
Potri.009G169400 Populus trichocarpa HOM05D008002 ORTHO05D010148 1.3e-23 113.2 121 44.6
PSO675G9248 Papaver somniferum HOM05D008002 ORTHO05D010148 1.5e-22 109.8 125 45.6
PSO541G1248 Papaver somniferum HOM05D008002 ORTHO05D010148 3.3e-22 108.6 125 44.8
AT4G38213 Arabidopsis thaliana HOM05D008002 ORTHO05D010148 5.6e-22 107.8 106 50.9
TAR628G1479 Trochodendron aralioides HOM05D008002 ORTHO05D010148 9.5e-22 107.1 89 62.9
Sc08g0002060 Simmondsia chinensis HOM05D008002 ORTHO05D010148 6.2e-21 104.4 108 46.3
Eucgr.H05000 Eucalyptus grandis HOM05D008002 ORTHO05D010148 3.1e-20 102.1 108 47.2
Zm00001eb035270 Zea mays HOM05D008002 ORTHO05D010148 6.8e-20 100.9 115 45.2
MBI17_g13390_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 1.5e-19 99.8 94 52.1
SEGI_35818 Sequoiadendron giganteum HOM05D008002 ORTHO05D010148 1.5e-19 99.8 99 45.5
Thhalv10027398m.g Eutrema salsugineum HOM05D008002 ORTHO05D010148 2.2e-18 95.9 108 48.1
ATR0763G180 Amborella trichopoda HOM05D008002 ORTHO05D010148 8.3e-18 94.0 103 48.5
Sp7g37530 Schrenkiella parvula HOM05D008002 ORTHO05D010148 1.1e-17 93.6 100 45.0
MBI01_g17256_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 5.4e-17 91.3 81 54.3
HPP92_007470 Vanilla planifolia HOM05D008002 ORTHO05D010148 4.6e-16 88.2 115 41.7
Aqoxy6G02976 Aquilegia oxysepala HOM05D008002 ORTHO05D010148 7.8e-16 87.4 141 39.0
MBI12_g13710_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 1.7e-15 86.3 85 51.8
MBI03_g24838_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 3.9e-15 85.1 93 47.3
AL7G10120 Arabidopsis lyrata HOM05D008002 ORTHO05D010148 1.1e-14 83.6 83 50.6
Os08g0512100 Oryza sativa ssp. japonica HOM05D008002 ORTHO05D010148 1.1e-14 83.6 131 37.4
CDE10G0941 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 1.5e-14 83.2 93 49.5
CDE10G0514 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 2.5e-14 82.4 90 50.0
MBI18_g48147_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 4.3e-14 81.6 86 51.2
CARHR293990 Cardamine hirsuta HOM05D008002 ORTHO05D010148 4.1e-09 65.1 76 47.4
Gohir.A13G064166 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.6e-08 63.2 80 42.5


User provided reference genes

Program Settings