Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0458151 Helianthus annuus HOM05D007136 ORTHO05D008986 8.4e-174 613.6 316 100.0
Lsat_1_v5_gn_2_119701 Lactuca sativa HOM05D007136 ORTHO05D008986 2.1e-140 502.7 312 82.1
ECA238G4577 Erigeron canadensis HOM05D007136 ORTHO05D008986 1.0e-139 500.4 315 81.6
Rhsim09G0165500 Rhododendron simsii HOM05D007136 ORTHO05D008986 2.1e-116 422.9 308 69.2
Dinv26003 Davidia involucrata HOM05D007136 ORTHO05D008986 1.4e-115 420.2 308 68.5
Hma1.2p1_0683F.1_g202870 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 8.9e-115 417.5 308 67.9
vmacro10240 Vaccinium macrocarpon HOM05D007136 ORTHO05D008986 1.7e-113 413.3 308 66.6
Cc02_g07990 Coffea canephora HOM05D007136 ORTHO05D008986 9.5e-109 397.5 308 65.6
MSTRG.8246 Avicennia marina HOM05D007136 ORTHO05D008986 2.1e-108 396.4 308 65.3
Sopen06g013560 Solanum pennellii HOM05D007136 ORTHO05D008986 3.6e-108 395.6 308 63.0
TAR633G2090 Trochodendron aralioides HOM05D000330 ORTHO05D008986 6.8e-107 391.3 308 64.0
Migut.F01500 Erythranthe guttata HOM05D007136 ORTHO05D008986 1.5e-106 390.2 308 62.3
Nn2g10391 Nelumbo nucifera HOM05D007136 ORTHO05D008986 1.3e-105 387.1 308 63.0
GSVIVG01016535001 Vitis vinifera HOM05D007136 ORTHO05D008986 2.2e-105 386.3 308 64.3
DCAR_027635 Daucus carota HOM05D007136 ORTHO05D008986 2.4e-104 382.9 308 61.7
Actinidia29223 Actinidia chinensis HOM05D007136 ORTHO05D008986 4.1e-104 382.1 308 64.3
CANSAT56G3368 Cannabis sativa HOM05D007136 ORTHO05D008986 4.1e-104 382.1 308 63.0
Prupe.2G233400 Prunus persica HOM05D007136 ORTHO05D008986 5.4e-104 381.7 308 61.4
Nitab4.5_0000931g0010 Nicotiana tabacum HOM05D007136 ORTHO05D008986 1.2e-103 380.6 308 61.0
RcHm_v2.0_Chr1g0366511 Rosa chinensis HOM05D007136 ORTHO05D008986 1.6e-103 380.2 308 60.7
SGA_v2.0_scaffold86G26943 Striga asiatica HOM05D007136 ORTHO05D008986 1.0e-102 377.5 308 63.0
CiPaw.01G285300 Carya illinoinensis HOM05D007136 ORTHO05D008986 3.9e-102 375.6 308 61.0
Haze_17049 Corylus avellana HOM05D007136 ORTHO05D008986 6.6e-102 374.8 319 60.2
Thecc.10G044100 Theobroma cacao HOM05D007136 ORTHO05D008986 6.6e-102 374.8 309 60.2
SalBow6G2062 Salvia bowleyana HOM05D007136 ORTHO05D008986 1.5e-101 373.6 308 60.4
MD07G1196400 Malus domestica HOM05D007136 ORTHO05D008986 5.6e-101 371.7 308 61.0
Peaxi162Scf00658g00728 Petunia axillaris HOM05D007136 ORTHO05D008986 9.5e-101 370.9 306 61.8
Ciclev10032197m.g Citrus clementina HOM05D007136 ORTHO05D008986 3.6e-100 369.0 308 59.4
Ca_07254_v3 Cicer arietinum L. HOM05D007136 ORTHO05D008986 8.1e-100 367.9 308 60.1
Atru.chr12.462 Acer truncatum HOM05D007136 ORTHO05D008986 1.8e-99 366.7 308 59.1
Lj1g0011729 Lotus japonicus HOM05D007136 ORTHO05D008986 2.3e-99 366.3 311 59.5
PGR044G0021 Punica granatum HOM05D007136 ORTHO05D008986 5.2e-99 365.2 308 59.4
FvH4_7g22120 Fragaria vesca HOM05D007136 ORTHO05D008986 6.8e-99 364.8 308 58.1
Glyma.18G289500 Glycine max HOM05D007136 ORTHO05D008986 8.9e-99 364.4 308 58.4
FAN01G1261 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.5e-98 363.6 308 57.8
Atru.chr12.484 Acer truncatum HOM05D007136 ORTHO05D008986 3.4e-98 362.5 308 58.4
FAN06G2040 Fragaria x ananassa HOM05D007136 ORTHO05D008986 5.8e-98 361.7 308 57.8
FAN01G1850 Fragaria x ananassa HOM05D007136 ORTHO05D008986 7.6e-98 361.3 308 57.8
Psat3g181320 Pisum sativum HOM05D007136 ORTHO05D008986 7.6e-98 361.3 308 59.1
Potri.010G205900 Populus trichocarpa HOM05D007136 ORTHO05D008986 1.3e-97 360.5 308 58.4
Nitab4.5_0000065g0080 Nicotiana tabacum HOM05D007136 ORTHO05D008986 2.2e-97 359.8 307 59.3
TWI15G0021 Tripterygium wilfordii HOM05D007136 ORTHO05D008986 3.7e-97 359.0 308 59.7
Gohir.D10G226000 Gossypium hirsutum HOM05D007136 ORTHO05D008986 4.9e-97 358.6 309 57.9
Gorai.011G257200 Gossypium raimondii HOM05D007136 ORTHO05D008986 8.3e-97 357.8 309 57.9
FAN06G2061 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.4e-96 357.1 308 57.1
Gohir.A10G217300 Gossypium hirsutum HOM05D007136 ORTHO05D008986 2.4e-96 356.3 309 57.9
Medtr7g024560 Medicago truncatula HOM05D007136 ORTHO05D008986 2.7e-95 352.8 308 56.8
AUR62038352 Chenopodium quinoa HOM05D007136 ORTHO05D008986 4.6e-95 352.1 308 58.4
FAN03G0232 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.0e-94 350.9 308 56.5
VMungo1383G1564 Vigna mungo HOM05D007136 ORTHO05D008986 1.0e-94 350.9 308 56.8
Phvul.008G012700 Phaseolus vulgaris HOM05D007136 ORTHO05D008986 3.9e-94 349.0 308 57.1
arahy.Tifrunner.gnm1.ann1.IQ4HGL Arachis hypogaea HOM05D007136 ORTHO05D008986 2.5e-93 346.3 305 57.7
arahy.Tifrunner.gnm1.ann1.RSMT0C Arachis hypogaea HOM05D007136 ORTHO05D008986 2.5e-93 346.3 305 57.7
Aqoxy2G02097 Aquilegia oxysepala HOM05D007136 ORTHO05D008986 1.2e-92 344.0 301 56.5
ClCG09G019950 Citrullus lanatus HOM05D007136 ORTHO05D008986 3.6e-92 342.4 308 54.9
QL08p059192 Quercus lobata HOM05D007136 ORTHO05D008986 4.7e-92 342.0 430 46.3
Lalb_Chr10g0091721 Lupinus albus HOM05D007136 ORTHO05D008986 6.2e-92 341.7 308 53.9
Ah.16g107010 Amaranthus hybridus HOM05D007136 ORTHO05D008986 8.9e-91 337.8 308 56.2
TPR.G15525 Trifolium pratense HOM05D007136 ORTHO05D008986 1.2e-90 337.4 308 54.9
Sed0006263 Sechium edule HOM05D007136 ORTHO05D008986 1.4e-88 330.5 308 52.6
Cfa001492 Carpinus fangiana HOM05D007136 ORTHO05D008986 9.3e-88 327.8 272 60.3
Hund20032 Selenicereus undatus HOM05D007136 ORTHO05D008986 2.1e-87 326.6 343 51.3
Sabra10G0159100 Salix brachista HOM05D007136 ORTHO05D008986 7.8e-87 324.7 354 50.0
MELO3C021650.2 Cucumis melo HOM05D007136 ORTHO05D008986 1.7e-86 323.6 309 52.1
COL.COLO4_14997 Corchorus olitorius HOM05D007136 ORTHO05D008986 8.7e-86 321.2 354 50.3
CsaV3_5G026510 Cucumis sativus L. HOM05D007136 ORTHO05D008986 1.5e-85 320.5 309 51.5
EL10Ac2g03388 Beta vulgaris HOM05D007136 ORTHO05D008986 1.3e-84 317.4 359 50.1
ATR0559G284 Amborella trichopoda HOM05D007136 ORTHO05D008986 2.1e-84 316.6 293 55.6
PSO339G3352 Papaver somniferum HOM05D007136 ORTHO05D008986 1.9e-80 303.5 304 52.3
Hma1.2p1_0683F.1_g202860 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 7.1e-80 301.6 251 63.3
HPP92_001682 Vanilla planifolia HOM05D007136 ORTHO05D008986 1.0e-78 297.7 305 49.2
PSO151G0201 Papaver somniferum HOM05D007136 ORTHO05D008986 2.3e-78 296.6 305 50.2
MBI05_g22899_MAGBIO Magnolia biondii HOM05D007136 ORTHO05D008986 3.3e-77 292.7 299 55.2
Os03g0276600 Oryza sativa ssp. japonica HOM05D007136 ORTHO05D008986 2.4e-75 286.6 300 49.7
BraA05t23073Z Brassica rapa HOM05D007136 ORTHO05D008986 4.0e-75 285.8 309 46.0
THA.LOC104799346 Tarenaya hassleriana HOM05D007136 ORTHO05D008986 6.9e-75 285.0 309 46.9
C05p63040 Brassica napus HOM05D007136 ORTHO05D008986 9.0e-75 284.6 309 46.0
BolC5t34957H Brassica oleracea HOM05D007136 ORTHO05D008986 9.0e-75 284.6 309 46.0
Eucgr.J00020 Eucalyptus grandis HOM05D007136 ORTHO05D008986 2.6e-74 283.1 237 58.2
CSS0027543 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 1.7e-73 280.4 267 57.7
CDE09G1315 Ceratophyllum demersum HOM05D007136 ORTHO05D008986 1.7e-73 280.4 308 50.3
Manes.07G114900 Manihot esculenta HOM05D007136 ORTHO05D008986 2.2e-73 280.0 240 57.1
CSS0005502 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 8.4e-73 278.1 267 56.9
Sp3g03000 Schrenkiella parvula HOM05D007136 ORTHO05D008986 8.4e-73 278.1 309 45.3
Solyc06g043070.4 Solanum lycopersicum HOM05D007136 ORTHO05D008986 3.5e-71 272.7 239 57.3
Aa31LG5G14590 Aethionema arabicum HOM05D007136 ORTHO05D008986 4.6e-71 272.3 315 44.8
Cpa.g.sc1.397 Carica papaya HOM05D007136 ORTHO05D008986 7.9e-71 271.6 242 59.1
unitig_736.g22315 Utricularia gibba HOM05D007136 ORTHO05D008986 7.9e-71 271.6 323 47.4
Carub.0003s0327 Capsella rubella HOM05D007136 ORTHO05D008986 8.7e-70 268.1 309 43.0
CARHR078150 Cardamine hirsuta HOM05D007136 ORTHO05D008986 1.5e-69 267.3 309 42.4
A05p43340 Brassica napus HOM05D007136 ORTHO05D008986 3.3e-69 266.2 294 45.2
BcaC05g30543 Brassica carinata HOM05D007136 ORTHO05D008986 7.4e-69 265.0 292 46.2
AL3G13930 Arabidopsis lyrata HOM05D007136 ORTHO05D008986 1.3e-68 264.2 309 43.4
Thhalv10021212m.g Eutrema salsugineum HOM05D007136 ORTHO05D008986 1.3e-68 264.2 309 42.7
SEGI_31981 Sequoiadendron giganteum HOM05D007136 ORTHO05D008986 6.2e-68 261.9 292 45.2
Sc09g0007080 Simmondsia chinensis HOM05D007136 ORTHO05D008986 4.5e-66 255.8 218 61.9
Lj4C909G7 Lonicera japonica HOM05D007136 ORTHO05D008986 4.2e-64 249.2 216 63.0
Zm00001eb012480 Zea mays HOM05D007136 ORTHO05D008986 4.6e-63 245.7 303 44.6
Dinv31448 Davidia involucrata HOM05D007136 ORTHO05D008986 1.5e-61 240.7 237 55.3
Duzib106G1934 Durio zibethinus HOM05D007136 ORTHO05D008986 1.0e-57 228.0 175 62.9
AT3G04020 Arabidopsis thaliana HOM05D007136 ORTHO05D008986 1.0e-46 191.4 243 42.0
Pp3c12_11030 Physcomitrium patens HOM05D007136 ORTHO05D008986 5.3e-43 179.1 296 34.5
Glyma.02G092900 Glycine max HOM05D007136 ORTHO05D008986 1.2e-42 177.9 241 42.3
AUR62041862 Chenopodium quinoa HOM05D007136 ORTHO05D008986 7.2e-40 168.7 115 68.7
Mapoly0002s0030 Marchantia polymorpha HOM05D007136 ORTHO05D008986 7.4e-29 132.1 269 28.6
Solyc06g043060.1 Solanum lycopersicum HOM05D007136 ORTHO05D008986 2.2e-25 120.6 67 79.1
AUR62041861 Chenopodium quinoa HOM05D007136 ORTHO05D008986 5.5e-24 115.9 112 55.4
CSS0002221 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 9.4e-24 115.2 67 74.6
CSS0010171 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 1.6e-23 114.4 67 74.6
CAN.G1401.1 Capsicum annuum HOM05D007136 ORTHO05D008986 8.8e-22 108.6 68 72.1
FAN10G3057 Fragaria x ananassa HOM05D007136 ORTHO05D025577 1.2e-18 98.2 64 62.5
Lsat_1_v5_gn_4_175920 Lactuca sativa HOM05D001061 ORTHO05D006808 1.2e-10 71.6 42 81.0
SHI07863 Sapria himalayana HOM05D007136 ORTHO05D008986 2.5e-08 63.9 63 52.4


User provided reference genes

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