Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0446891 Helianthus annuus HOM05D007103 ORTHO05D008948 6.0e-250 867.1 444 100.0
ECA246G2851 Erigeron canadensis HOM05D007103 ORTHO05D008948 1.9e-171 606.3 435 72.4
Lsat_1_v5_gn_3_27560 Lactuca sativa HOM05D007103 ORTHO05D008948 1.4e-166 590.1 444 73.0
Lj3A854G74 Lonicera japonica HOM05D007103 ORTHO05D008948 2.8e-159 565.8 474 67.1
GSVIVG01010248001 Vitis vinifera HOM05D007103 ORTHO05D008948 2.7e-157 559.3 460 67.8
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 3.6e-154 548.9 456 65.8
Cfa015108 Carpinus fangiana HOM05D007103 ORTHO05D008948 8.8e-153 544.3 453 66.9
Haze_01571 Corylus avellana HOM05D007103 ORTHO05D008948 4.4e-152 542.0 450 66.7
Dinv06214 Davidia involucrata HOM05D007103 ORTHO05D008948 7.5e-152 541.2 451 67.0
TAR371G1171 Trochodendron aralioides HOM05D007103 ORTHO05D008948 9.8e-152 540.8 456 66.2
Manes.10G065901 Manihot esculenta HOM05D007103 ORTHO05D008948 1.8e-150 536.6 451 64.7
MELO3C005211.2 Cucumis melo HOM05D007103 ORTHO05D008948 3.8e-148 528.9 452 64.4
Sed0022925 Sechium edule HOM05D007103 ORTHO05D008948 5.0e-148 528.5 452 63.9
Rhsim04G0168800 Rhododendron simsii HOM05D007103 ORTHO05D008948 1.5e-147 526.9 524 59.2
QL03p041867 Quercus lobata HOM05D007103 ORTHO05D008948 9.5e-147 524.2 456 64.5
CsaV3_5G017430 Cucumis sativus L. HOM05D007103 ORTHO05D008948 1.5e-144 516.9 452 62.6
PGR044G1063 Punica granatum HOM05D007103 ORTHO05D008948 2.0e-144 516.5 449 63.7
Prupe.1G342500 Prunus persica HOM05D007103 ORTHO05D008948 3.4e-144 515.8 463 63.9
MSTRG.2093 Avicennia marina HOM05D007103 ORTHO05D008948 1.3e-143 513.8 456 62.3
Sabra08G0108900 Salix brachista HOM05D007103 ORTHO05D008948 1.3e-143 513.8 438 62.1
Thecc.02G296200 Theobroma cacao HOM05D007103 ORTHO05D008948 4.9e-143 511.9 454 63.2
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 3.5e-141 505.8 443 63.4
Sopen04g003720 Solanum pennellii HOM05D007103 ORTHO05D008948 7.8e-141 504.6 454 63.7
Solyc04g008560.3 Solanum lycopersicum HOM05D007103 ORTHO05D008948 2.3e-140 503.1 454 63.4
PGSC0003DMG400031375 Solanum tuberosum HOM05D007103 ORTHO05D008948 6.6e-140 501.5 454 63.7
Glyma.05G135400 Glycine max HOM05D007103 ORTHO05D008948 1.1e-139 500.7 453 63.6
Nitab4.5_0000129g0430 Nicotiana tabacum HOM05D007103 ORTHO05D008948 1.1e-139 500.7 455 63.5
COL.COLO4_27515 Corchorus olitorius HOM05D007103 ORTHO05D008948 3.3e-139 499.2 452 62.2
RcHm_v2.0_Chr4g0446051 Rosa chinensis HOM05D007103 ORTHO05D008948 5.6e-139 498.4 463 61.8
CANSAT78G0644 Cannabis sativa HOM05D007103 ORTHO05D008948 2.1e-138 496.5 452 62.4
arahy.Tifrunner.gnm1.ann1.CDY64E Arachis hypogaea HOM05D007103 ORTHO05D008948 4.7e-138 495.4 447 61.7
arahy.Tifrunner.gnm1.ann1.U7H2Z0 Arachis hypogaea HOM05D007103 ORTHO05D008948 6.1e-138 495.0 447 61.7
Eucgr.B02623 Eucalyptus grandis HOM05D007103 ORTHO05D008948 1.4e-137 493.8 456 60.7
Nitab4.5_0007973g0020 Nicotiana tabacum HOM05D007103 ORTHO05D008948 5.2e-137 491.9 453 62.0
THA.LOC104805941 Tarenaya hassleriana HOM05D007103 ORTHO05D008948 5.2e-137 491.9 454 61.7
Migut.E00576 Erythranthe guttata HOM05D007103 ORTHO05D008948 8.9e-137 491.1 479 60.5
Peaxi162Scf00329g00938 Petunia axillaris HOM05D007103 ORTHO05D008948 2.0e-136 490.0 451 63.4
Nn3g18722 Nelumbo nucifera HOM05D007103 ORTHO05D008948 3.4e-136 489.2 429 62.9
CAN.G458.2 Capsicum annuum HOM05D007103 ORTHO05D008948 3.7e-135 485.7 393 66.9
Gohir.D01G137900 Gossypium hirsutum HOM05D007103 ORTHO05D008948 3.7e-135 485.7 454 60.1
Gorai.002G168100 Gossypium raimondii HOM05D007103 ORTHO05D008948 3.7e-135 485.7 454 60.4
SGA_v2.0_scaffold127G33990 Striga asiatica HOM05D007103 ORTHO05D008948 5.4e-134 481.9 444 61.5
Gohir.A01G145152 Gossypium hirsutum HOM05D007103 ORTHO05D008948 9.2e-134 481.1 454 59.7
Potri.008G143700 Populus trichocarpa HOM05D007103 ORTHO05D008948 9.2e-134 481.1 416 62.0
DCAR_030327 Daucus carota HOM05D007103 ORTHO05D008948 1.6e-133 480.3 454 57.5
Ca_18212_v3 Cicer arietinum L. HOM05D007103 ORTHO05D008948 2.3e-132 476.5 448 60.9
CDE08G0078 Ceratophyllum demersum HOM05D007103 ORTHO05D008948 3.0e-132 476.1 449 60.4
Ciclev10005118m.g Citrus clementina HOM05D007103 ORTHO05D008948 1.1e-131 474.2 393 65.9
MD13G1010500 Malus domestica HOM05D007103 ORTHO05D008948 1.1e-131 474.2 469 61.2
ATR0618G149 Amborella trichopoda HOM05D007103 ORTHO05D008948 2.5e-131 473.0 455 60.2
PSO478G2004 Papaver somniferum HOM05D007103 ORTHO05D008948 1.4e-129 467.2 455 59.6
Carub.0005s0121 Capsella rubella HOM05D007103 ORTHO05D008948 1.8e-129 466.8 455 59.3
unitig_8.g4025 Utricularia gibba HOM05D007103 ORTHO05D008948 5.8e-128 461.8 447 58.2
Lalb_Chr13g0293061 Lupinus albus HOM05D007103 ORTHO05D008948 1.7e-127 460.3 449 59.7
Psat7g086680 Pisum sativum HOM05D007103 ORTHO05D008948 4.9e-127 458.8 450 59.1
AL5G11410 Arabidopsis lyrata HOM05D007103 ORTHO05D008948 3.2e-126 456.1 459 59.0
Lj4g0001083 Lotus japonicus HOM05D007103 ORTHO05D008948 7.0e-126 454.9 454 58.4
FAN12G1264 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.5e-123 447.2 469 55.9
Sp2g13560 Schrenkiella parvula HOM05D007103 ORTHO05D008948 2.5e-123 446.4 458 57.2
HPP92_022082 Vanilla planifolia HOM05D007103 ORTHO05D008948 5.6e-123 445.3 455 58.0
Aa31LG2G7810 Aethionema arabicum HOM05D007103 ORTHO05D008948 9.5e-123 444.5 454 57.5
FAN17G1256 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.6e-122 443.7 470 55.5
FAN07G2615 Fragaria x ananassa HOM05D007103 ORTHO05D008948 8.1e-122 441.4 469 55.2
AT2G02148 Arabidopsis thaliana HOM05D007103 ORTHO05D008948 5.8e-120 435.3 452 58.2
Glyma.08G090600 Glycine max HOM05D007103 ORTHO05D008948 5.8e-120 435.3 386 64.0
BcaC04g21529 Brassica carinata HOM05D007103 ORTHO05D008948 8.3e-119 431.4 451 56.8
C09p30690 Brassica napus HOM05D007103 ORTHO05D008948 1.4e-118 430.6 451 56.5
MBI06_g12320_MAGBIO Magnolia biondii HOM05D007103 ORTHO05D008948 2.4e-118 429.9 312 71.5
BraA09t37988Z Brassica rapa HOM05D007103 ORTHO05D008948 7.8e-117 424.9 453 56.7
CARHR144820 Cardamine hirsuta HOM05D007103 ORTHO05D008948 3.9e-116 422.5 456 56.6
BolC9t55934H Brassica oleracea HOM05D007103 ORTHO05D008948 5.1e-116 422.2 456 55.9
Sc03g0005470 Simmondsia chinensis HOM05D007103 ORTHO05D008948 6.6e-116 421.8 448 54.9
vmacro08589 Vaccinium macrocarpon HOM05D007103 ORTHO05D008948 8.6e-116 421.4 338 65.4
A09p23820 Brassica napus HOM05D007103 ORTHO05D008948 1.9e-115 420.2 455 55.4
CiPaw.05G161900 Carya illinoinensis HOM05D007103 ORTHO05D008948 4.3e-115 419.1 321 67.9
ClCG01G007020 Citrullus lanatus HOM05D007103 ORTHO05D008948 9.6e-115 417.9 335 64.5
Thhalv10004194m.g Eutrema salsugineum HOM05D007103 ORTHO05D008948 6.2e-114 415.2 463 54.9
BcaB07g30707 Brassica carinata HOM05D007103 ORTHO05D008948 1.8e-113 413.7 455 56.7
Phvul.002G186800 Phaseolus vulgaris HOM05D007103 ORTHO05D008948 5.8e-112 408.7 438 53.9
TPR.G34765 Trifolium pratense HOM05D007103 ORTHO05D008948 9.9e-112 407.9 446 54.9
AUR62003469 Chenopodium quinoa HOM05D007103 ORTHO05D008948 1.9e-110 403.7 436 52.8
Actinidia32355 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.2e-109 401.0 356 61.5
Aqoxy3G00022 Aquilegia oxysepala HOM05D007103 ORTHO05D008948 3.9e-108 396.0 404 54.7
EL10Ac6g15409 Beta vulgaris HOM05D007103 ORTHO05D008948 1.3e-103 380.9 518 46.5
Ciclev10010767m.g Citrus clementina HOM05D007103 ORTHO05D008948 8.7e-100 368.2 251 72.5
PSO017G4620 Papaver somniferum HOM05D007103 ORTHO05D008948 1.9e-99 367.1 370 57.3
AUR62017776 Chenopodium quinoa HOM05D007103 ORTHO05D008948 2.8e-98 363.2 409 51.3
FvH4_4g36300 Fragaria vesca HOM05D007103 ORTHO05D008948 8.1e-98 361.7 346 56.6
Zm00001eb228800 Zea mays HOM05D007103 ORTHO05D008948 1.5e-96 357.5 388 52.1
VMungo0251G2627 Vigna mungo HOM05D007103 ORTHO05D008948 1.2e-93 347.8 394 52.5
FAN22G0934 Fragaria x ananassa HOM05D007103 ORTHO05D008948 2.5e-91 340.1 323 56.3
BcaB07g30709 Brassica carinata HOM05D007103 ORTHO05D008948 5.3e-89 332.4 420 49.5
SalBow2G1702 Salvia bowleyana HOM05D007103 ORTHO05D008948 1.1e-86 324.7 276 65.2
Mapoly0001s0015 Marchantia polymorpha HOM05D007103 ORTHO05D008948 7.9e-85 318.5 482 44.4
SEGI_34932 Sequoiadendron giganteum HOM05D007103 ORTHO05D008948 5.0e-79 299.3 318 52.5
Pp3c5_2140 Physcomitrium patens HOM05D007103 ORTHO05D008948 2.1e-77 293.9 474 41.8
Atru.chr11.1054 Acer truncatum HOM05D007103 ORTHO05D008948 4.6e-77 292.7 428 46.3
Pp3c6_26300 Physcomitrium patens HOM05D007103 ORTHO05D008948 5.7e-75 285.8 466 41.0
SMO358G0481 Selaginella moellendorffii HOM05D007103 ORTHO05D008948 2.6e-72 276.9 445 40.2
Actinidia25204 Actinidia chinensis HOM05D007103 ORTHO05D008948 5.5e-70 269.2 176 75.6
Actinidia31381 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.3e-58 231.5 390 43.3
CBR_g70721 Chara braunii HOM05D007103 ORTHO05D008948 1.8e-57 227.6 406 38.7
AagrBONN_evm.TU.Sc2ySwM_368.3256 Anthoceros agrestis HOM05D007103 ORTHO05D008948 4.2e-54 216.5 307 42.7
Cpa.g.sc2.105 Carica papaya HOM05D007103 ORTHO05D008948 3.6e-53 213.4 218 57.8
Medtr5g010860 Medicago truncatula HOM05D007103 ORTHO05D008948 1.6e-45 188.0 200 55.5
Lsat_1_v5_gn_3_133181 Lactuca sativa HOM05D003297 ORTHO05D004027 5.9e-40 169.5 151 65.6
Pp3c6_29570 Physcomitrium patens HOM05D007103 ORTHO05D008948 8.3e-34 149.1 178 45.5
Hund18263 Selenicereus undatus HOM05D007103 ORTHO05D008948 3.6e-21 107.1 199 40.7
Cpa.g.sc2.103 Carica papaya HOM05D007103 ORTHO05D008948 1.1e-12 79.0 63 61.9
Aa31LG1G6410 Aethionema arabicum HOM05D007103 ORTHO05D008948 4.0e-12 77.0 103 45.6
CAN.G166.15 Capsicum annuum HOM05D007103 ORTHO05D008948 2.0e-11 74.7 84 48.8
Medtr6g043130 Medicago truncatula HOM05D007103 ORTHO05D008948 6.4e-10 69.7 42 76.2


User provided reference genes

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