Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0442981 Helianthus annuus HOM05D005709 ORTHO05D006306 0.0e+00 1266.9 655 100.0
ECA238G0695 Erigeron canadensis HOM05D005709 ORTHO05D006306 1.7e-301 1038.9 658 80.2
CiPaw.07G047300 Carya illinoinensis HOM05D005709 ORTHO05D006306 7.5e-233 810.8 660 65.3
QL06p035832 Quercus lobata HOM05D005709 ORTHO05D006306 2.8e-232 808.9 660 63.3
Cfa006877 Carpinus fangiana HOM05D005709 ORTHO05D006306 1.8e-231 806.2 657 63.2
Lju188A3T31 Lonicera japonica HOM05D005709 ORTHO05D006306 1.8e-231 806.2 661 64.3
Haze_03880 Corylus avellana HOM05D005709 ORTHO05D006306 7.0e-231 804.3 657 64.2
TAR625G0141 Trochodendron aralioides HOM05D005709 ORTHO05D006306 3.5e-230 802.0 661 63.8
Actinidia28821 Actinidia chinensis HOM05D005709 ORTHO05D006306 7.7e-230 800.8 671 62.4
Lsat_1_v5_gn_2_70300 Lactuca sativa HOM05D005709 ORTHO05D006306 1.1e-228 797.0 503 78.1
PGSC0003DMG400016130 Solanum tuberosum HOM05D005709 ORTHO05D006306 9.4e-228 793.9 662 63.7
CSS0001510 Camellia sinensis var. sinensis HOM05D005709 ORTHO05D006306 1.4e-226 790.0 683 61.8
vmacro18555 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 1.4e-226 790.0 675 62.5
Sopen11g005470 Solanum pennellii HOM05D005709 ORTHO05D006306 4.0e-226 788.5 660 63.5
Nitab4.5_0013799g0010 Nicotiana tabacum HOM05D005709 ORTHO05D006306 5.2e-226 788.1 658 63.1
Cpa.g.sc55.19 Carica papaya HOM05D005709 ORTHO05D006306 2.6e-225 785.8 663 62.0
RcHm_v2.0_Chr2g0111161 Rosa chinensis HOM05D005709 ORTHO05D006306 1.8e-223 779.6 665 60.5
Rhsim08G0016800 Rhododendron simsii HOM05D005709 ORTHO05D006306 3.1e-223 778.9 673 61.4
Solyc11g010660.2 Solanum lycopersicum HOM05D005709 ORTHO05D006306 1.6e-222 776.5 662 62.8
FAN28G2327 Fragaria x ananassa HOM05D005709 ORTHO05D006306 1.0e-221 773.9 659 60.5
Aqoxy5G01380 Aquilegia oxysepala HOM05D005709 ORTHO05D006306 6.6e-221 771.2 662 63.3
CANSAT01G1032 Cannabis sativa HOM05D005709 ORTHO05D006306 8.0e-219 764.2 659 61.3
Nitab4.5_0007624g0020 Nicotiana tabacum HOM05D005709 ORTHO05D006306 8.0e-219 764.2 708 59.2
MD03G1143200 Malus domestica HOM05D005709 ORTHO05D006306 1.4e-218 763.5 655 61.2
MD11G1164000 Malus domestica HOM05D005709 ORTHO05D006306 3.0e-218 762.3 653 60.2
PGR102G2444 Punica granatum HOM05D005709 ORTHO05D006306 6.8e-218 761.1 654 63.1
Nn3g18597 Nelumbo nucifera HOM05D005709 ORTHO05D006306 2.6e-217 759.2 672 58.8
TWI74G1439 Tripterygium wilfordii HOM05D005709 ORTHO05D006306 3.4e-217 758.8 653 59.6
Prupe.6G202100 Prunus persica HOM05D005709 ORTHO05D006306 5.7e-217 758.1 658 59.0
FAN26G3468 Fragaria x ananassa HOM05D005709 ORTHO05D006306 2.9e-216 755.7 658 59.3
ClCG10G007760 Citrullus lanatus HOM05D005709 ORTHO05D006306 4.9e-216 755.0 661 59.5
Ciclev10025155m.g Citrus clementina HOM05D005709 ORTHO05D006306 6.4e-216 754.6 647 60.9
Potri.006G134400 Populus trichocarpa HOM05D005709 ORTHO05D006306 8.3e-216 754.2 655 60.3
FvH4_1g19610 Fragaria vesca HOM05D005709 ORTHO05D006306 1.8e-215 753.1 660 58.9
Peaxi162Scf00474g00732 Petunia axillaris HOM05D005709 ORTHO05D006306 1.2e-214 750.4 663 63.2
Hund16527 Selenicereus undatus HOM05D005709 ORTHO05D006306 4.6e-214 748.4 653 60.9
Manes.12G125900 Manihot esculenta HOM05D005709 ORTHO05D006306 1.7e-213 746.5 660 62.7
MELO3C016416.2 Cucumis melo HOM05D005709 ORTHO05D006306 1.5e-212 743.4 667 58.2
Eucgr.H04723 Eucalyptus grandis HOM05D005709 ORTHO05D006306 4.3e-212 741.9 660 59.7
Ca_22702_v3 Cicer arietinum L. HOM05D005709 ORTHO05D006306 7.3e-212 741.1 648 59.6
Migut.K00802 Erythranthe guttata HOM05D005709 ORTHO05D006306 7.3e-212 741.1 657 60.7
Sabra06G0105500 Salix brachista HOM05D005709 ORTHO05D006306 7.3e-212 741.1 678 58.6
arahy.Tifrunner.gnm1.ann1.7T2SE7 Arachis hypogaea HOM05D005709 ORTHO05D006306 2.8e-211 739.2 659 60.1
arahy.Tifrunner.gnm1.ann1.IH5V0S Arachis hypogaea HOM05D005709 ORTHO05D006306 2.8e-211 739.2 659 60.1
Lj2g0012290 Lotus japonicus HOM05D005709 ORTHO05D006306 6.2e-211 738.0 650 61.1
SGA_v2.0_scaffold115G32123 Striga asiatica HOM05D005709 ORTHO05D006306 8.0e-211 737.6 668 59.0
Cc07_g14050 Coffea canephora HOM05D005709 ORTHO05D006306 1.0e-210 737.3 666 58.1
CsaV3_3G006890 Cucumis sativus L. HOM05D005709 ORTHO05D006306 2.3e-210 736.1 661 59.6
Thhalv10003796m.g Eutrema salsugineum HOM05D005709 ORTHO05D006306 2.3e-210 736.1 654 58.6
Lalb_Chr09g0325971 Lupinus albus HOM05D005709 ORTHO05D006306 3.1e-210 735.7 653 58.5
Medtr5g032050 Medicago truncatula HOM05D005709 ORTHO05D006306 1.2e-209 733.8 641 60.4
DCAR_010090 Daucus carota HOM05D005709 ORTHO05D006306 1.7e-208 729.9 650 60.9
Glyma.09G199500 Glycine max HOM05D005709 ORTHO05D006306 6.4e-208 728.0 663 58.8
Sp2g28570 Schrenkiella parvula HOM05D005709 ORTHO05D006306 6.4e-208 728.0 658 58.1
Thecc.01G090000 Theobroma cacao HOM05D005709 ORTHO05D006306 6.4e-208 728.0 656 59.3
A06p32320 Brassica napus HOM05D005709 ORTHO05D006306 1.1e-207 727.2 658 59.7
EL10Ac6g15201 Beta vulgaris HOM05D005709 ORTHO05D006306 7.0e-207 724.5 652 59.0
Sed0005807 Sechium edule HOM05D005709 ORTHO05D006306 2.0e-206 723.0 656 59.3
Ah.02g123530 Amaranthus hybridus HOM05D005709 ORTHO05D006306 4.6e-206 721.8 649 58.2
C03p60550 Brassica napus HOM05D005709 ORTHO05D006306 3.9e-205 718.8 652 60.4
AL8G43070 Arabidopsis lyrata HOM05D005709 ORTHO05D006306 8.6e-205 717.6 659 59.0
BolC3t18312H Brassica oleracea HOM05D005709 ORTHO05D006306 1.5e-204 716.8 653 58.7
VMungo1215G1966 Vigna mungo HOM05D005709 ORTHO05D006306 1.9e-204 716.5 655 57.1
Carub.0008s2634 Capsella rubella HOM05D005709 ORTHO05D006306 2.5e-204 716.1 658 58.8
FAN19G1851 Fragaria x ananassa HOM05D005709 ORTHO05D006306 3.3e-204 715.7 625 58.9
Duzib187G1076 Durio zibethinus HOM05D005709 ORTHO05D006306 4.3e-204 715.3 657 58.0
PSO170G3043 Papaver somniferum HOM05D005709 ORTHO05D006306 4.3e-204 715.3 650 59.2
AT5G65490 Arabidopsis thaliana HOM05D005709 ORTHO05D006306 2.1e-203 713.0 656 59.5
BraA06t26158Z Brassica rapa HOM05D005709 ORTHO05D006306 3.6e-203 712.2 657 59.2
CARHR279470 Cardamine hirsuta HOM05D005709 ORTHO05D006306 4.0e-202 708.8 658 57.8
Aa31LG1G16510 Aethionema arabicum HOM05D005709 ORTHO05D006306 3.4e-201 705.7 657 58.1
Atru.chr3.1240 Acer truncatum HOM05D005709 ORTHO05D006306 4.4e-201 705.3 640 58.3
Psat2g082080 Pisum sativum HOM05D005709 ORTHO05D006306 2.9e-200 702.6 653 56.7
AUR62003667 Chenopodium quinoa HOM05D005709 ORTHO05D006306 6.4e-200 701.4 607 62.1
Gorai.003G037400 Gossypium raimondii HOM05D005709 ORTHO05D006306 2.1e-198 696.4 664 59.6
Gohir.A02G144800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 3.0e-197 692.6 656 59.3
MBI16_g12470_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 6.6e-197 691.4 681 54.5
Gohir.D03G035800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 2.5e-196 689.5 656 59.6
COL.COLO4_27357 Corchorus olitorius HOM05D005709 ORTHO05D006306 4.3e-196 688.7 679 55.7
vmacro21792 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 1.1e-191 674.1 598 60.4
GSVIVG01007131001 Vitis vinifera HOM05D005709 ORTHO05D006306 1.3e-189 667.2 501 66.7
vmacro18553 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 1.9e-188 663.3 566 61.5
PSO017G1508 Papaver somniferum HOM05D005709 ORTHO05D006306 1.2e-187 660.6 653 56.0
unitig_32.g11802 Utricularia gibba HOM05D005709 ORTHO05D006306 1.4e-183 647.1 683 52.1
SHI21884 Sapria himalayana HOM05D005709 ORTHO05D006306 1.6e-182 643.7 648 53.1
Os08g0447200 Oryza sativa ssp. japonica HOM05D005709 ORTHO05D006306 6.6e-181 638.3 673 54.1
Phvul.002G146800 Phaseolus vulgaris HOM05D005709 ORTHO05D006306 9.9e-177 624.4 542 58.3
AUR62017977 Chenopodium quinoa HOM05D005709 ORTHO05D006306 1.7e-176 623.6 657 54.5
ATR0763G252 Amborella trichopoda HOM05D005709 ORTHO05D006306 4.2e-175 619.0 690 51.4
Zm00001eb040880 Zea mays HOM05D005709 ORTHO05D006306 7.1e-175 618.2 661 50.7
Glyma.01G022800 Glycine max HOM05D005709 ORTHO05D006306 4.0e-170 602.4 529 59.0
Sc03g0000380 Simmondsia chinensis HOM05D005709 ORTHO05D006306 9.0e-170 601.3 504 61.7
CAN.G1344.19 Capsicum annuum HOM05D005709 ORTHO05D006306 1.1e-167 594.3 529 61.2
SEGI_11890 Sequoiadendron giganteum HOM05D005709 ORTHO05D006306 1.6e-163 580.5 701 47.1
HPP92_015350 Vanilla planifolia HOM05D005709 ORTHO05D006306 2.9e-152 543.1 539 53.4
vmacro21794 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 1.4e-151 540.8 602 50.7
THA.LOC104809180 Tarenaya hassleriana HOM05D005709 ORTHO05D006306 2.8e-139 500.0 487 54.6
SMO137G0394 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 1.2e-129 468.0 644 41.9
PSO675G1794 Papaver somniferum HOM05D005709 ORTHO05D006306 5.2e-125 452.6 438 58.4
Medtr4g125890 Medicago truncatula HOM05D005709 ORTHO05D006306 2.0e-121 440.7 525 49.7
Pp3c1_9650 Physcomitrium patens HOM05D005709 ORTHO05D006306 3.6e-118 429.9 631 40.9
Mapoly0135s0033 Marchantia polymorpha HOM05D005709 ORTHO05D006306 2.4e-114 417.2 759 37.5
Dinv13596 Davidia involucrata HOM05D005709 ORTHO05D006306 1.4e-101 374.8 344 58.7
TPR.G36816 Trifolium pratense HOM05D005709 ORTHO05D006306 2.9e-99 367.1 289 63.3
SMO137G0085 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 5.6e-95 352.8 604 37.1
TAR381G1594 Trochodendron aralioides HOM05D005709 ORTHO05D006306 3.1e-93 347.1 380 54.2
Dinv13597 Davidia involucrata HOM05D005709 ORTHO05D006306 4.0e-93 346.7 290 64.1
MBI16_g19593_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 5.0e-88 329.7 333 53.5
AagrBONN_evm.TU.Sc2ySwM_368.1496 Anthoceros agrestis HOM05D005709 ORTHO05D006306 2.8e-86 323.9 654 34.3
Oeu002141.1 Olea europaea HOM05D005709 ORTHO05D006306 6.0e-81 306.2 288 58.0
Nitab4.5_0001235g0070 Nicotiana tabacum HOM05D005280 ORTHO05D006253 1.3e-80 305.1 415 48.0
CBR_g78875 Chara braunii HOM05D005709 ORTHO05D006306 1.9e-79 301.2 531 36.7
TPR.G36731 Trifolium pratense HOM05D005709 ORTHO05D006306 1.2e-73 282.0 287 55.1
HPP92_015330 Vanilla planifolia HOM05D005709 ORTHO05D006306 4.3e-71 273.5 326 47.2
Nitab4.5_0000294g0080 Nicotiana tabacum HOM05D005280 ORTHO05D006253 1.6e-65 255.0 206 66.5
PSO210G2291 Papaver somniferum HOM05D005709 ORTHO05D006306 9.0e-61 239.2 379 41.4
BcaC01g02778 Brassica carinata HOM05D005709 ORTHO05D006306 1.4e-58 231.9 181 64.1
TAR381G1451 Trochodendron aralioides HOM05D005709 ORTHO05D006306 2.1e-57 228.0 149 71.1
Oeu031122.1 Olea europaea HOM05D005709 ORTHO05D006306 4.0e-53 213.8 192 57.8
THA.LOC104821549 Tarenaya hassleriana HOM05D005709 ORTHO05D006306 3.3e-47 194.1 155 60.6
Sed0017677 Sechium edule HOM05D005709 ORTHO05D006306 2.1e-46 191.4 373 37.8
BcaC01g02779 Brassica carinata HOM05D005709 ORTHO05D006306 3.5e-41 174.1 118 67.8
Cre03.g145707 Chlamydomonas reinhardtii HOM05D005709 ORTHO05D006306 2.1e-38 164.9 435 29.4
PRCOL_00002122 Prasinoderma coloniale HOM05D005709 ORTHO05D006306 1.2e-36 159.1 674 27.9
BcaC01g02777 Brassica carinata HOM05D005709 ORTHO05D006306 8.2e-30 136.3 174 50.0
SEGI_13404 Sequoiadendron giganteum HOM05D005709 ORTHO05D006306 7.2e-18 96.7 91 60.4
SMO162G0006 Selaginella moellendorffii HOM05D000981 ORTHO05D006306 1.0e-16 92.8 162 37.0
SMO207G0001 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 4.4e-15 87.4 90 47.8
SalBow5G5475 Salvia bowleyana HOM05D036480 ORTHO05D006306 5.3e-13 80.5 130 40.0
BolC2t12478H Brassica oleracea HOM05D005709 ORTHO05D006306 7.0e-13 80.1 98 48.0
TPR.G34440 Trifolium pratense HOM05D005709 ORTHO05D006306 1.6e-12 79.0 63 60.3
Phvul.008G217000 Phaseolus vulgaris HOM05D005709 ORTHO05D006306 3.5e-12 77.8 54 72.2
CARHR215690 Cardamine hirsuta HOM05D005709 ORTHO05D006306 8.5e-11 73.2 53 62.3
C02p64140 Brassica napus HOM05D005709 ORTHO05D006306 1.5e-10 72.4 98 44.9
TPR.G25795 Trifolium pratense HOM05D005709 ORTHO05D006306 1.9e-10 72.0 63 55.6
HPP92_015331 Vanilla planifolia HOM05D005709 ORTHO05D006306 4.2e-10 70.9 55 65.5


User provided reference genes

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