Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0394971 Helianthus annuus HOM05D003152 ORTHO05D020396 1.4e-47 192.6 93 100.0
Lsat_1_v5_gn_6_1880 Lactuca sativa HOM05D003152 ORTHO05D004094 5.6e-25 117.5 69 84.1
HanXRQChr02g0049441 Helianthus annuus HOM05D003152 ORTHO05D004094 3.6e-24 114.8 69 84.1
ECA233G4900 Erigeron canadensis HOM05D003152 ORTHO05D004094 6.2e-24 114.0 69 84.1
CSS0013092 Camellia sinensis var. sinensis HOM05D003152 ORTHO05D004094 2.3e-23 112.1 69 79.7
Lalb_Chr25g0278851 Lupinus albus HOM05D003152 ORTHO05D004094 3.1e-23 111.7 70 78.6
Migut.J01479 Erythranthe guttata HOM05D003152 ORTHO05D004094 1.5e-22 109.4 77 71.4
arahy.Tifrunner.gnm1.ann1.U0ISBZ Arachis hypogaea HOM05D003152 ORTHO05D004094 2.0e-22 109.0 69 78.3
Cc06_g13250 Coffea canephora HOM05D003152 ORTHO05D004094 2.0e-22 109.0 69 78.3
Oeu056513.1 Olea europaea HOM05D003152 ORTHO05D004094 2.0e-22 109.0 69 79.7
MSTRG.19706 Avicennia marina HOM05D003152 ORTHO05D004094 3.4e-22 108.2 69 78.3
Ca_20540_v3 Cicer arietinum L. HOM05D003152 ORTHO05D004094 3.4e-22 108.2 80 65.0
Rhsim03G0143900 Rhododendron simsii HOM05D003152 ORTHO05D004094 3.4e-22 108.2 69 75.4
CiPaw.11G150900 Carya illinoinensis HOM05D003152 ORTHO05D004094 4.4e-22 107.8 68 79.4
Ciclev10020462m.g Citrus clementina HOM05D003152 ORTHO05D004094 4.4e-22 107.8 69 78.3
Peaxi162Scf02044g00011 Petunia axillaris HOM05D003152 ORTHO05D020396 4.4e-22 107.8 79 67.1
SalBow6G1354 Salvia bowleyana HOM05D003152 ORTHO05D004094 4.4e-22 107.8 69 76.8
Thecc.03G256500 Theobroma cacao HOM05D003152 ORTHO05D004094 4.4e-22 107.8 69 76.8
vmacro14103 Vaccinium macrocarpon HOM05D003152 ORTHO05D004094 5.8e-22 107.5 77 66.2
GSVIVG01001278001 Vitis vinifera HOM05D003152 ORTHO05D004094 5.8e-22 107.5 69 76.8
arahy.Tifrunner.gnm1.ann1.AX7FJG Arachis hypogaea HOM05D003152 ORTHO05D004094 7.6e-22 107.1 69 76.8
Rhsim07G0104900 Rhododendron simsii HOM05D003152 ORTHO05D004094 9.9e-22 106.7 69 72.5
Haze_07861 Corylus avellana HOM05D003152 ORTHO05D004094 1.3e-21 106.3 69 73.9
ECA246G1886 Erigeron canadensis HOM05D003152 ORTHO05D004094 1.3e-21 106.3 69 75.4
Gohir.A09G195600 Gossypium hirsutum HOM05D003152 ORTHO05D004094 1.3e-21 106.3 69 75.4
Solyc03g097470.3 Solanum lycopersicum HOM05D003152 ORTHO05D004094 1.7e-21 105.9 69 72.5
Sopen03g028240 Solanum pennellii HOM05D003152 ORTHO05D004094 1.7e-21 105.9 69 72.5
DCAR_008467 Daucus carota HOM05D003152 ORTHO05D004094 2.2e-21 105.5 69 73.9
Peaxi162Scf00909g00216 Petunia axillaris HOM05D003152 ORTHO05D004094 2.2e-21 105.5 70 72.9
GSVIVG01004779001 Vitis vinifera HOM05D003152 ORTHO05D004094 2.2e-21 105.5 69 75.4
Actinidia02109 Actinidia chinensis HOM05D003152 ORTHO05D004094 2.9e-21 105.1 69 72.5
Aqoxy5G03922 Aquilegia oxysepala HOM05D003152 ORTHO05D004094 2.9e-21 105.1 69 73.9
Eucgr.E00458 Eucalyptus grandis HOM05D003152 ORTHO05D004094 2.9e-21 105.1 69 73.9
Lj8C337T1 Lonicera japonica HOM05D003152 ORTHO05D004094 2.9e-21 105.1 69 73.9
Medtr4g007180 Medicago truncatula HOM05D003152 ORTHO05D004094 2.9e-21 105.1 77 66.2
Prupe.5G075100 Prunus persica HOM05D003152 ORTHO05D004094 2.9e-21 105.1 68 76.5
Actinidia27454 Actinidia chinensis HOM05D003152 ORTHO05D004094 3.7e-21 104.8 69 72.5
CANSAT21G0390 Cannabis sativa HOM05D003152 ORTHO05D004094 3.7e-21 104.8 69 73.9
Cfa012769 Carpinus fangiana HOM05D003152 ORTHO05D004094 3.7e-21 104.8 69 72.5
Duzib084G0469 Durio zibethinus HOM05D003152 ORTHO05D004094 3.7e-21 104.8 69 73.9
Gohir.D09G190200 Gossypium hirsutum HOM05D003152 ORTHO05D004094 3.7e-21 104.8 69 73.9
Gohir.D11G025800 Gossypium hirsutum HOM05D003152 ORTHO05D004094 3.7e-21 104.8 69 73.9
Gorai.006G212800 Gossypium raimondii HOM05D003152 ORTHO05D004094 3.7e-21 104.8 69 73.9
Gorai.007G028000 Gossypium raimondii HOM05D003152 ORTHO05D004094 3.7e-21 104.8 69 73.9
Nn8g39222 Nelumbo nucifera HOM05D003152 ORTHO05D004094 3.7e-21 104.8 69 73.9
Oeu009849.2 Olea europaea HOM05D003152 ORTHO05D004094 3.7e-21 104.8 68 76.5
Peaxi162Scf00133g00053 Petunia axillaris HOM05D003152 ORTHO05D004094 3.7e-21 104.8 70 74.3
SalBow1G3248 Salvia bowleyana HOM05D003152 ORTHO05D004094 3.7e-21 104.8 69 75.4
Sc19g0002810 Simmondsia chinensis HOM05D003152 ORTHO05D004094 3.7e-21 104.8 69 73.9
SGA_v2.0_scaffold66G22451 Striga asiatica HOM05D003152 ORTHO05D020396 3.7e-21 104.8 72 72.2
Aa31LG2G230 Aethionema arabicum HOM05D003152 ORTHO05D004094 4.9e-21 104.4 70 72.9
Aqoxy1G02009 Aquilegia oxysepala HOM05D003152 ORTHO05D004094 4.9e-21 104.4 69 72.5
CSS0031797 Camellia sinensis var. sinensis HOM05D003152 ORTHO05D004094 4.9e-21 104.4 69 72.5
COL.COLO4_37209 Corchorus olitorius HOM05D003152 ORTHO05D004094 4.9e-21 104.4 69 73.9
QL06p053048 Quercus lobata HOM05D003152 ORTHO05D004094 4.9e-21 104.4 69 72.5
Solyc08g006560.3 Solanum lycopersicum HOM05D003152 ORTHO05D004094 4.9e-21 104.4 70 70.0
MD08G1135900 Malus domestica HOM05D003152 ORTHO05D004094 6.4e-21 104.0 68 73.5
MD09G1022600 Malus domestica HOM05D003152 ORTHO05D004094 6.4e-21 104.0 68 73.5
MD12G1033000 Malus domestica HOM05D003152 ORTHO05D004094 6.4e-21 104.0 68 73.5
Peaxi162Scf01440g00026 Petunia axillaris HOM05D003152 ORTHO05D004094 6.4e-21 104.0 72 68.1
QL12p013407 Quercus lobata HOM05D003152 ORTHO05D004094 6.4e-21 104.0 69 72.5
TPR.G19173 Trifolium pratense HOM05D003152 ORTHO05D004094 6.4e-21 104.0 69 73.9
Duzib068G0523 Durio zibethinus HOM05D003152 ORTHO05D004094 8.4e-21 103.6 68 76.5
Glyma.09G277400 Glycine max HOM05D003152 ORTHO05D004094 8.4e-21 103.6 69 73.9
Lsat_1_v5_gn_6_109081 Lactuca sativa HOM05D003152 ORTHO05D004094 8.4e-21 103.6 69 69.6
Lalb_Chr22g0349441 Lupinus albus HOM05D003152 ORTHO05D004094 8.4e-21 103.6 69 72.5
Potri.001G120900 Populus trichocarpa HOM05D003152 ORTHO05D004094 8.4e-21 103.6 69 73.9
Sabra01G0093100 Salix brachista HOM05D003152 ORTHO05D004094 8.4e-21 103.6 69 73.9
PGSC0003DMG400026308 Solanum tuberosum HOM05D003152 ORTHO05D004094 8.4e-21 103.6 70 70.0
THA.LOC104823549 Tarenaya hassleriana HOM05D003152 ORTHO05D004094 8.4e-21 103.6 69 73.9
CAN.G285.10 Capsicum annuum HOM05D003152 ORTHO05D004094 1.1e-20 103.2 70 72.9
unitig_21.g20649 Utricularia gibba HOM05D003152 ORTHO05D004094 1.1e-20 103.2 77 66.2
Cpa.g.sc29.131 Carica papaya HOM05D003152 ORTHO05D004094 1.4e-20 102.8 69 71.0
Gohir.A11G026500 Gossypium hirsutum HOM05D003152 ORTHO05D004094 1.4e-20 102.8 69 72.5
PSO063G1414 Papaver somniferum HOM05D003152 ORTHO05D004094 1.4e-20 102.8 68 73.5
TAR629G0380 Trochodendron aralioides HOM05D003152 ORTHO05D004094 1.4e-20 102.8 69 73.9
DCAR_027796 Daucus carota HOM05D003152 ORTHO05D004094 1.9e-20 102.4 69 71.0
HanXRQChr05g0148701 Helianthus annuus HOM05D003152 ORTHO05D004094 1.9e-20 102.4 68 70.6
Hma1.2p1_1414F.1_g281900 Hydrangea macrophylla HOM05D003152 ORTHO05D004094 1.9e-20 102.4 69 73.9
Lj3g0024855 Lotus japonicus HOM05D003152 ORTHO05D004094 1.9e-20 102.4 69 72.5
TAR636G2130 Trochodendron aralioides HOM05D003152 ORTHO05D004094 1.9e-20 102.4 69 72.5
AUR62024611 Chenopodium quinoa HOM05D003152 ORTHO05D004094 2.4e-20 102.1 69 72.5
Ca_01015_v3 Cicer arietinum L. HOM05D003152 ORTHO05D004094 2.4e-20 102.1 69 73.9
DCAR_018049 Daucus carota HOM05D003152 ORTHO05D002674 2.4e-20 102.1 69 69.6
Glyma.18G211400 Glycine max HOM05D003152 ORTHO05D004094 2.4e-20 102.1 69 72.5
Lalb_Chr24g0392881 Lupinus albus HOM05D003152 ORTHO05D004094 2.4e-20 102.1 69 71.0
MBI11_g24608_MAGBIO Magnolia biondii HOM05D003152 ORTHO05D004094 2.4e-20 102.1 69 75.4
Manes.02G036200 Manihot esculenta HOM05D003152 ORTHO05D004094 2.4e-20 102.1 69 73.9
PGR042G2869 Punica granatum HOM05D003152 ORTHO05D004094 2.4e-20 102.1 68 75.0
Hund14601 Selenicereus undatus HOM05D003152 ORTHO05D004094 2.4e-20 102.1 69 73.9
Sopen08g002520 Solanum pennellii HOM05D003152 ORTHO05D004094 2.4e-20 102.1 70 68.6
Atru.chr9.1375 Acer truncatum HOM05D003152 ORTHO05D004094 3.2e-20 101.7 69 73.9
FAN04G1135 Fragaria x ananassa HOM05D003152 ORTHO05D004094 3.2e-20 101.7 68 73.5
FAN08G1487 Fragaria x ananassa HOM05D003152 ORTHO05D004094 3.2e-20 101.7 68 73.5
Medtr2g105100 Medicago truncatula HOM05D003152 ORTHO05D004094 3.2e-20 101.7 69 72.5
Peaxi162Scf00516g00327 Petunia axillaris HOM05D003152 ORTHO05D004094 3.2e-20 101.7 73 68.5
TWI81G1045 Tripterygium wilfordii HOM05D003152 ORTHO05D004094 3.2e-20 101.7 69 72.5
AL2G13230 Arabidopsis lyrata HOM05D003152 ORTHO05D004094 4.1e-20 101.3 70 71.4
AT1G62640 Arabidopsis thaliana HOM05D003152 ORTHO05D004094 4.1e-20 101.3 70 71.4
Carub.0002s0233 Capsella rubella HOM05D003152 ORTHO05D004094 4.1e-20 101.3 70 71.4
CARHR049250 Cardamine hirsuta HOM05D003152 ORTHO05D004094 4.1e-20 101.3 70 71.4
FvH4_5g00250 Fragaria vesca HOM05D003152 ORTHO05D004094 4.1e-20 101.3 68 73.5
FAN18G0254 Fragaria x ananassa HOM05D003152 ORTHO05D004094 4.1e-20 101.3 68 73.5
Nn2g11781 Nelumbo nucifera HOM05D003152 ORTHO05D004094 4.1e-20 101.3 69 72.5
TWI60G0644 Tripterygium wilfordii HOM05D003152 ORTHO05D004094 4.1e-20 101.3 69 72.5
arahy.Tifrunner.gnm1.ann1.EZ70MQ Arachis hypogaea HOM05D003152 ORTHO05D004094 5.4e-20 100.9 69 71.0
arahy.Tifrunner.gnm1.ann1.UBEE9G Arachis hypogaea HOM05D003152 ORTHO05D004094 5.4e-20 100.9 69 71.0
CiPaw.12G107100 Carya illinoinensis HOM05D003152 ORTHO05D004094 5.4e-20 100.9 69 72.5
MBI03_g12759_MAGBIO Magnolia biondii HOM05D003152 ORTHO05D004094 5.4e-20 100.9 69 73.9
RcHm_v2.0_Chr7g0202391 Rosa chinensis HOM05D003152 ORTHO05D004094 5.4e-20 100.9 68 72.1
Manes.01G076900 Manihot esculenta HOM05D003152 ORTHO05D004094 7.1e-20 100.5 69 71.0
PSO782G4661 Papaver somniferum HOM05D003152 ORTHO05D004094 7.1e-20 100.5 68 72.1
Peaxi162Scf00133g00411 Petunia axillaris HOM05D003152 ORTHO05D020396 7.1e-20 100.5 70 67.1
Peaxi162Scf00909g00014 Petunia axillaris HOM05D003152 ORTHO05D004094 7.1e-20 100.5 70 68.6
VMungo1383G1558 Vigna mungo HOM05D003152 ORTHO05D004094 7.1e-20 100.5 68 73.5
FAN13G2916 Fragaria x ananassa HOM05D003152 ORTHO05D004094 9.2e-20 100.1 68 72.1
Lj8C258T8 Lonicera japonica HOM05D003152 ORTHO05D004094 9.2e-20 100.1 68 70.6
MSTRG.26221 Avicennia marina HOM05D003152 ORTHO05D004094 1.2e-19 99.8 69 71.0
AUR62039936 Chenopodium quinoa HOM05D003152 ORTHO05D004094 1.2e-19 99.8 69 72.5
ClCG01G003860 Citrullus lanatus HOM05D003152 ORTHO05D004094 1.2e-19 99.8 70 71.4
MELO3C005558.2 Cucumis melo HOM05D003152 ORTHO05D004094 1.2e-19 99.8 70 71.4
CsaV3_5G003990 Cucumis sativus L. HOM05D003152 ORTHO05D004094 1.2e-19 99.8 70 71.4
Oeu002545.1 Olea europaea HOM05D003152 ORTHO05D004094 1.2e-19 99.8 84 64.3
SGA_v2.0_scaffold69G23257 Striga asiatica HOM05D003152 ORTHO05D004094 1.2e-19 99.8 69 71.0
Peaxi162Scf01440g00024 Petunia axillaris HOM05D003152 ORTHO05D004094 1.6e-19 99.4 70 68.6
BraA09t36961Z Brassica rapa HOM05D003152 ORTHO05D004094 2.1e-19 99.0 70 70.0
Phvul.008G086600 Phaseolus vulgaris HOM05D003152 ORTHO05D004094 2.1e-19 99.0 68 72.1
Psat5g306080 Pisum sativum HOM05D003152 ORTHO05D004094 2.1e-19 99.0 69 71.0
HanXRQChr17g0550351 Helianthus annuus HOM05D003152 ORTHO05D004094 2.7e-19 98.6 67 74.6
AagrBONN_evm.TU.Sc2ySwM_117.2850 Anthoceros agrestis HOM05D003152 ORTHO05D004094 3.5e-19 98.2 77 64.9
BcaB07g31342 Brassica carinata HOM05D003152 ORTHO05D004094 3.5e-19 98.2 70 70.0
Dinv39108 Davidia involucrata HOM05D003152 ORTHO05D004094 3.5e-19 98.2 69 68.1
Peaxi162Scf03529g00006 Petunia axillaris HOM05D003152 ORTHO05D004094 3.5e-19 98.2 69 66.7
ATR0001G047 Amborella trichopoda HOM05D003152 ORTHO05D004094 4.6e-19 97.8 68 73.5
EL10Ac5g13014 Beta vulgaris HOM05D003152 ORTHO05D004094 4.6e-19 97.8 69 68.1
BcaC04g22425 Brassica carinata HOM05D003152 ORTHO05D004094 4.6e-19 97.8 70 70.0
A09p16150 Brassica napus HOM05D003152 ORTHO05D004094 4.6e-19 97.8 70 70.0
C09p19490 Brassica napus HOM05D003152 ORTHO05D004094 4.6e-19 97.8 70 70.0
BolC9t54852H Brassica oleracea HOM05D003152 ORTHO05D004094 4.6e-19 97.8 70 70.0
BraA09t37250Z Brassica rapa HOM05D003152 ORTHO05D004094 4.6e-19 97.8 70 70.0
PSO017G6794 Papaver somniferum HOM05D003152 ORTHO05D004094 4.6e-19 97.8 69 71.0
PSO170G2789 Papaver somniferum HOM05D003152 ORTHO05D004094 4.6e-19 97.8 69 71.0
Sed0001437 Sechium edule HOM05D003152 ORTHO05D004094 4.6e-19 97.8 70 70.0
BolC9t54465H Brassica oleracea HOM05D003152 ORTHO05D004094 6.0e-19 97.4 70 70.0
Dinv21605 Davidia involucrata HOM05D003152 ORTHO05D004094 6.0e-19 97.4 69 69.6
Os04g0643300 Oryza sativa ssp. japonica HOM05D003152 ORTHO05D004094 6.0e-19 97.4 67 71.6
Peaxi162Scf01440g00025 Petunia axillaris HOM05D003152 ORTHO05D020396 6.0e-19 97.4 77 63.6
Ah.02g115360 Amaranthus hybridus HOM05D003152 ORTHO05D004094 7.8e-19 97.1 69 68.1
AUR62011765 Chenopodium quinoa HOM05D003152 ORTHO05D004094 7.8e-19 97.1 69 68.1
Thhalv10023499m.g Eutrema salsugineum HOM05D003152 ORTHO05D004094 7.8e-19 97.1 70 70.0
CDE09G1100 Ceratophyllum demersum HOM05D003152 ORTHO05D020396 1.3e-18 96.3 56 76.8
SHI20570 Sapria himalayana HOM05D003152 ORTHO05D004094 2.3e-18 95.5 69 69.6
Zm00001eb068760 Zea mays HOM05D003152 ORTHO05D004094 2.3e-18 95.5 68 70.6
BcaC04g22757 Brassica carinata HOM05D003152 ORTHO05D004094 3.0e-18 95.1 70 68.6
C09p15600 Brassica napus HOM05D003152 ORTHO05D004094 3.0e-18 95.1 70 68.6
MD04G1085000 Malus domestica HOM05D003152 ORTHO05D004094 3.9e-18 94.7 67 68.7
Zm00001eb431950 Zea mays HOM05D003152 ORTHO05D004094 3.9e-18 94.7 68 70.6
Ah.12g062230 Amaranthus hybridus HOM05D003152 ORTHO05D004094 5.1e-18 94.4 69 66.7
Sp2g02000 Schrenkiella parvula HOM05D003152 ORTHO05D004094 5.1e-18 94.4 70 67.1
Peaxi162Scf00133g00016 Petunia axillaris HOM05D003152 ORTHO05D004094 1.9e-17 92.4 70 64.3
CBR_g30012 Chara braunii HOM05D003152 ORTHO05D004094 2.5e-17 92.0 77 61.0
HPP92_013054 Vanilla planifolia HOM05D003152 ORTHO05D004094 4.3e-17 91.3 67 70.1
HPP92_013064 Vanilla planifolia HOM05D003152 ORTHO05D004094 4.3e-17 91.3 67 70.1
Nitab4.5_0001108g0030 Nicotiana tabacum HOM05D003152 ORTHO05D004094 5.6e-17 90.9 98 52.0
Nitab4.5_0000011g0260 Nicotiana tabacum HOM05D003152 ORTHO05D004094 7.3e-17 90.5 98 52.0
Pp3c7_10260 Physcomitrium patens HOM05D003152 ORTHO05D004094 2.1e-16 89.0 69 66.7
Pp3c11_14950 Physcomitrium patens HOM05D003152 ORTHO05D004094 1.8e-15 85.9 69 63.8
CDE11G0141 Ceratophyllum demersum HOM05D000908 ORTHO05D020396 2.4e-15 85.5 51 76.5
AUR62007480 Chenopodium quinoa HOM05D003152 ORTHO05D004094 2.4e-15 85.5 91 52.7
Pp3c2_25970 Physcomitrium patens HOM05D003152 ORTHO05D004094 2.4e-15 85.5 69 63.8
SMO270G0022 Selaginella moellendorffii HOM05D003152 ORTHO05D004094 1.2e-14 83.2 70 60.0
Mapoly0040s0081 Marchantia polymorpha HOM05D003152 ORTHO05D004094 1.5e-14 82.8 69 58.0
Nitab4.5_0004670g0040 Nicotiana tabacum HOM05D003152 ORTHO05D004094 9.9e-14 80.1 43 81.4
Nitab4.5_0000021g1070 Nicotiana tabacum HOM05D003152 ORTHO05D004094 3.8e-13 78.2 43 79.1
MCO03G154 Micromonas commoda HOM05D003152 ORTHO05D004094 2.4e-12 75.5 70 54.3
CAN.G732.11 Capsicum annuum HOM05D003152 ORTHO05D004094 4.2e-12 74.7 110 43.6
THA.LOC104809460 Tarenaya hassleriana HOM05D003152 ORTHO05D004094 3.5e-11 71.6 72 59.7
Lalb_Chr00c36g0408821 Lupinus albus HOM05D003152 ORTHO05D004094 1.3e-10 69.7 85 48.2
Cre04.g216950 Chlamydomonas reinhardtii HOM05D003152 ORTHO05D004094 6.6e-10 67.4 66 48.5
PRCOL_00000872 Prasinoderma coloniale HOM05D003152 ORTHO05D004094 8.7e-10 67.0 66 51.5
Aqoxy5G03927 Aquilegia oxysepala HOM05D003152 ORTHO05D077463 1.3e-08 63.2 83 44.6
Peaxi162Scf00133g00527 Petunia axillaris HOM05D003152 ORTHO05D004094 1.3e-08 63.2 46 69.6


User provided reference genes

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