Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0392981 Helianthus annuus HOM05D004948 ORTHO05D005824 2.3e-114 415.6 218 100.0
ECA233G3864 Erigeron canadensis HOM05D004948 ORTHO05D005824 1.9e-84 316.2 214 78.5
Lsat_1_v5_gn_8_6120 Lactuca sativa HOM05D004948 ORTHO05D005824 5.6e-84 314.7 220 73.2
Cpa.g.sc3.41 Carica papaya HOM05D004948 ORTHO05D005824 3.4e-73 278.9 226 65.5
Dinv35301 Davidia involucrata HOM05D004948 ORTHO05D005824 2.2e-72 276.2 206 69.4
vmacro06582 Vaccinium macrocarpon HOM05D004948 ORTHO05D005824 4.9e-72 275.0 227 65.2
Thecc.03G191700 Theobroma cacao HOM05D004948 ORTHO05D005824 8.4e-72 274.2 217 66.4
Duzib068G0205 Durio zibethinus HOM05D004948 ORTHO05D005824 1.6e-70 270.0 223 62.3
Actinidia34187 Actinidia chinensis HOM05D004948 ORTHO05D005824 2.1e-70 269.6 215 66.5
FAN01G0333 Fragaria x ananassa HOM05D004948 ORTHO05D005824 2.1e-70 269.6 217 65.4
Hma1.2p1_0142F.1_g064080 Hydrangea macrophylla HOM05D004948 ORTHO05D005824 2.1e-70 269.6 224 64.7
FAN10G0476 Fragaria x ananassa HOM05D004948 ORTHO05D005824 4.6e-70 268.5 217 65.4
MSTRG.65 Avicennia marina HOM05D004948 ORTHO05D005824 6.0e-70 268.1 208 68.3
Haze_00103 Corylus avellana HOM05D004948 ORTHO05D005824 7.8e-70 267.7 229 63.3
Dinv28347 Davidia involucrata HOM05D004948 ORTHO05D005824 7.8e-70 267.7 219 64.8
FAN06G2108 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.0e-69 267.3 217 65.0
COL.COLO4_04803 Corchorus olitorius HOM05D004948 ORTHO05D005824 1.3e-69 266.9 219 63.5
FAN10G0469 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.3e-69 266.9 217 65.0
SGA_v2.0_scaffold10G05268 Striga asiatica HOM05D004948 ORTHO05D005824 1.3e-69 266.9 216 66.2
Cfa016354 Carpinus fangiana HOM05D004948 ORTHO05D005824 1.7e-69 266.5 214 66.4
Ciclev10005800m.g Citrus clementina HOM05D004948 ORTHO05D005824 2.3e-69 266.2 220 66.8
Prupe.2G306200 Prunus persica HOM05D004948 ORTHO05D005824 2.3e-69 266.2 226 62.8
CiPaw.06G006800 Carya illinoinensis HOM05D004948 ORTHO05D005824 3.0e-69 265.8 214 65.0
SalBow2G2244 Salvia bowleyana HOM05D004948 ORTHO05D005824 3.0e-69 265.8 215 65.6
CANSAT21G0873 Cannabis sativa HOM05D004948 ORTHO05D005824 5.1e-69 265.0 217 65.0
Migut.F01058 Erythranthe guttata HOM05D004948 ORTHO05D005824 6.6e-69 264.6 226 61.5
GSVIVG01028728001 Vitis vinifera HOM05D004948 ORTHO05D005824 1.1e-68 263.8 218 66.5
PGR042G1790 Punica granatum HOM05D004948 ORTHO05D005824 1.5e-68 263.5 186 74.2
Rhsim03G0197700 Rhododendron simsii HOM05D004948 ORTHO05D005824 2.5e-68 262.7 214 65.0
Eucgr.A02670 Eucalyptus grandis HOM05D004948 ORTHO05D005824 3.3e-68 262.3 199 70.9
CsaV3_5G000730 Cucumis sativus L. HOM05D004948 ORTHO05D005824 4.3e-68 261.9 193 68.9
FAN06G4897 Fragaria x ananassa HOM05D004948 ORTHO05D005824 4.3e-68 261.9 217 64.1
ClCG01G000640 Citrullus lanatus HOM05D004948 ORTHO05D005824 5.6e-68 261.5 202 66.8
PGSC0003DMG400009097 Solanum tuberosum HOM05D004948 ORTHO05D005824 5.6e-68 261.5 212 64.6
FvH4_7g30910 Fragaria vesca HOM05D004948 ORTHO05D005824 7.3e-68 261.2 225 62.7
Sed0002242 Sechium edule HOM05D004948 ORTHO05D005824 9.6e-68 260.8 213 64.3
MELO3C005865.2 Cucumis melo HOM05D004948 ORTHO05D005824 1.3e-67 260.4 202 66.8
Peaxi162Scf00904g00460 Petunia axillaris HOM05D004948 ORTHO05D005824 1.6e-67 260.0 189 70.9
Atru.chr1.284 Acer truncatum HOM05D004948 ORTHO05D005824 2.1e-67 259.6 217 66.4
QL09p011186 Quercus lobata HOM05D004948 ORTHO05D005824 4.8e-67 258.5 214 65.4
TAR629G2953 Trochodendron aralioides HOM05D004948 ORTHO05D005824 4.8e-67 258.5 225 62.2
Oeu037114.1 Olea europaea HOM05D004948 ORTHO05D005824 8.1e-67 257.7 208 66.8
PGR083G1298 Punica granatum HOM05D004948 ORTHO05D005824 8.1e-67 257.7 220 65.5
Duzib205G0398 Durio zibethinus HOM05D004948 ORTHO05D005824 1.1e-66 257.3 217 63.1
Gohir.A12G252400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.1e-66 257.3 200 65.5
Gorai.008G271400 Gossypium raimondii HOM05D004948 ORTHO05D005824 1.4e-66 256.9 200 65.5
MBI07_g20438_MAGBIO Magnolia biondii HOM05D004948 ORTHO05D005824 1.8e-66 256.5 214 64.5
Gohir.D12G253100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 3.1e-66 255.8 200 65.0
MD01G1214200 Malus domestica HOM05D004948 ORTHO05D005824 3.1e-66 255.8 205 65.4
Solyc03g007480.3 Solanum lycopersicum HOM05D004948 ORTHO05D005824 4.0e-66 255.4 212 62.7
Manes.06G156200 Manihot esculenta HOM05D004948 ORTHO05D005824 5.3e-66 255.0 217 65.0
Sopen03g003430 Solanum pennellii HOM05D004948 ORTHO05D005824 5.3e-66 255.0 208 63.5
Potri.012G033100 Populus trichocarpa HOM05D004948 ORTHO05D005824 6.9e-66 254.6 229 61.6
CAN.G108.18 Capsicum annuum HOM05D004948 ORTHO05D005824 1.2e-65 253.8 197 65.5
PGSC0003DMG400028892 Solanum tuberosum HOM05D004948 ORTHO05D005824 2.6e-65 252.7 219 63.5
arahy.Tifrunner.gnm1.ann1.LZU7FF Arachis hypogaea HOM05D004948 ORTHO05D005824 1.3e-64 250.4 201 64.2
TAR636G2931 Trochodendron aralioides HOM05D004948 ORTHO05D005824 1.3e-64 250.4 218 63.3
EL10Ac3g05356 Beta vulgaris HOM05D004948 ORTHO05D005824 1.7e-64 250.0 187 65.2
MD07G1283800 Malus domestica HOM05D004948 ORTHO05D005824 2.2e-64 249.6 184 69.6
Sopen06g017830 Solanum pennellii HOM05D004948 ORTHO05D005824 2.9e-64 249.2 200 66.5
THA.LOC104800283 Tarenaya hassleriana HOM05D004948 ORTHO05D005824 3.8e-64 248.8 178 70.2
Aqoxy5G04108 Aquilegia oxysepala HOM05D004948 ORTHO05D005824 4.9e-64 248.4 225 59.6
Solyc06g051820.4 Solanum lycopersicum HOM05D004948 ORTHO05D005824 6.4e-64 248.1 199 66.3
Peaxi162Scf00618g00525 Petunia axillaris HOM05D004948 ORTHO05D005824 1.1e-63 247.3 188 68.6
RcHm_v2.0_Chr1g0379991 Rosa chinensis HOM05D004948 ORTHO05D005824 1.9e-63 246.5 171 74.3
AUR62021051 Chenopodium quinoa HOM05D004948 ORTHO05D005824 3.2e-63 245.7 187 64.2
AUR62031482 Chenopodium quinoa HOM05D004948 ORTHO05D005824 4.2e-63 245.4 187 64.2
Sc19g0001090 Simmondsia chinensis HOM05D004948 ORTHO05D005824 9.3e-63 244.2 197 64.5
Aa31sc29G60 Aethionema arabicum HOM05D004948 ORTHO05D005824 1.6e-62 243.4 198 63.6
Aa31LG5G23580 Aethionema arabicum HOM05D004948 ORTHO05D005824 2.7e-62 242.7 198 63.1
Lj1g0018821 Lotus japonicus HOM05D004948 ORTHO05D005824 3.5e-62 242.3 223 60.5
Potri.015G023400 Populus trichocarpa HOM05D004948 ORTHO05D005824 6.0e-62 241.5 222 60.8
Carub.0008s1349 Capsella rubella HOM05D004948 ORTHO05D005824 7.9e-62 241.1 217 59.0
DCAR_010636 Daucus carota HOM05D004948 ORTHO05D005824 7.9e-62 241.1 217 59.4
FAN03G1348 Fragaria x ananassa HOM05D004948 ORTHO05D005824 7.9e-62 241.1 217 60.8
AL8G28010 Arabidopsis lyrata HOM05D004948 ORTHO05D005824 1.0e-61 240.7 214 59.8
ATR1132G055 Amborella trichopoda HOM05D004948 ORTHO05D005824 2.3e-61 239.6 179 65.4
Sp6g15460 Schrenkiella parvula HOM05D004948 ORTHO05D005824 1.9e-60 236.5 212 60.4
Thhalv10014692m.g Eutrema salsugineum HOM05D004948 ORTHO05D005824 7.4e-60 234.6 198 63.1
Duzib084G1367 Durio zibethinus HOM05D004948 ORTHO05D005824 1.6e-59 233.4 217 59.0
Lalb_Chr04g0263671 Lupinus albus HOM05D004948 ORTHO05D005824 1.6e-59 233.4 180 65.0
Glyma.13G040600 Glycine max HOM05D004948 ORTHO05D005824 2.1e-59 233.0 206 63.1
Manes.14G019200 Manihot esculenta HOM05D004948 ORTHO05D005824 2.1e-59 233.0 203 61.1
CARHR266350 Cardamine hirsuta HOM05D004948 ORTHO05D005824 2.8e-59 232.6 208 59.6
AT5G53310 Arabidopsis thaliana HOM05D004948 ORTHO05D005824 6.2e-59 231.5 189 63.0
BcaB05g22031 Brassica carinata HOM05D004948 ORTHO05D005824 6.2e-59 231.5 192 64.6
TWI23G0483 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 1.4e-58 230.3 171 67.3
Aa31LG3G9220 Aethionema arabicum HOM05D004948 ORTHO05D005824 3.1e-58 229.2 204 57.8
BcaC03g14431 Brassica carinata HOM05D004948 ORTHO05D005824 1.5e-57 226.9 208 58.7
C02p18470 Brassica napus HOM05D004948 ORTHO05D005824 1.5e-57 226.9 208 58.7
BolC2t07987H Brassica oleracea HOM05D004948 ORTHO05D005824 1.5e-57 226.9 208 58.7
Hund27721 Selenicereus undatus HOM05D004948 ORTHO05D005824 1.5e-57 226.9 208 60.6
Hund27734 Selenicereus undatus HOM05D004948 ORTHO05D005824 1.5e-57 226.9 208 60.6
A02p11140 Brassica napus HOM05D004948 ORTHO05D005824 9.9e-57 224.2 208 57.7
BraA02t06177Z Brassica rapa HOM05D004948 ORTHO05D005824 9.9e-57 224.2 208 57.7
Actinidia31860 Actinidia chinensis HOM05D004948 ORTHO05D005824 3.2e-55 219.2 215 58.1
Lj1g0003063 Lotus japonicus HOM05D004948 ORTHO05D005824 3.2e-55 219.2 194 62.9
Nitab4.5_0001331g0180 Nicotiana tabacum HOM05D004948 ORTHO05D005824 1.2e-54 217.2 172 68.6
Nitab4.5_0000472g0200 Nicotiana tabacum HOM05D004948 ORTHO05D005824 2.1e-54 216.5 172 68.0
CAN.G204.5 Capsicum annuum HOM05D004948 ORTHO05D005824 3.5e-54 215.7 192 60.4
Lj3A912T42 Lonicera japonica HOM05D004948 ORTHO05D005824 7.9e-54 214.5 168 65.5
Glyma.04G238900 Glycine max HOM05D004948 ORTHO05D005824 2.3e-53 213.0 164 69.5
Gohir.D09G178100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 5.1e-53 211.8 202 56.9
Gorai.006G200200 Gossypium raimondii HOM05D004948 ORTHO05D005824 5.1e-53 211.8 202 56.9
Nn2g13651 Nelumbo nucifera HOM05D004948 ORTHO05D005824 5.1e-53 211.8 182 63.7
Ca_16670_v3 Cicer arietinum L. HOM05D004948 ORTHO05D005824 1.1e-52 210.7 178 62.9
Os01g0621700 Oryza sativa ssp. japonica HOM05D004948 ORTHO05D005824 1.1e-52 210.7 168 60.7
Cc02_g01980 Coffea canephora HOM05D004948 ORTHO05D005824 1.5e-52 210.3 206 56.8
Sabra12G0022300 Salix brachista HOM05D004948 ORTHO05D005824 1.9e-52 209.9 196 59.2
DCAR_008996 Daucus carota HOM05D002473 ORTHO05D005824 4.3e-52 208.8 158 65.2
Gohir.A09G183400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 5.6e-52 208.4 202 55.9
CDE04G0161 Ceratophyllum demersum HOM05D004948 ORTHO05D005824 2.1e-51 206.5 176 56.8
arahy.Tifrunner.gnm1.ann1.MD6354 Arachis hypogaea HOM05D004948 ORTHO05D005824 2.8e-51 206.1 170 62.4
Glyma.06G124800 Glycine max HOM05D004948 ORTHO05D005824 6.2e-51 204.9 184 62.5
Phvul.009G135700 Phaseolus vulgaris HOM05D004948 ORTHO05D005824 1.1e-50 204.1 198 58.6
TPR.G33862 Trifolium pratense HOM05D004948 ORTHO05D005824 2.4e-50 203.0 159 64.2
Psat0s97g0080 Pisum sativum HOM05D004948 ORTHO05D005824 1.2e-49 200.7 181 60.8
unitig_747.g21853 Utricularia gibba HOM05D004948 ORTHO05D005824 2.6e-49 199.5 199 57.3
HPP92_024433 Vanilla planifolia HOM05D004948 ORTHO05D005824 2.6e-49 199.5 155 61.9
Zm00001eb432120 Zea mays HOM05D004948 ORTHO05D005824 4.5e-49 198.7 146 67.8
DCAR_014528 Daucus carota HOM05D000121 ORTHO05D005824 1.0e-48 197.6 157 63.1
Lalb_Chr08g0240671 Lupinus albus HOM05D004948 ORTHO05D005824 1.0e-48 197.6 157 66.2
VMungo1309G3087 Vigna mungo HOM05D004948 ORTHO05D005824 1.0e-48 197.6 198 54.5
Ah.07g206090 Amaranthus hybridus HOM05D004948 ORTHO05D005824 4.9e-48 195.3 151 66.2
arahy.Tifrunner.gnm1.ann1.NIM4HJ Arachis hypogaea HOM05D004948 ORTHO05D005824 4.9e-48 195.3 160 61.9
Mapoly0143s0028 Marchantia polymorpha HOM05D004948 ORTHO05D005824 8.4e-48 194.5 191 53.4
Medtr3g090670 Medicago truncatula HOM05D004948 ORTHO05D005824 5.5e-47 191.8 147 69.4
TWI39G0355 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 7.9e-46 188.0 158 63.3
arahy.Tifrunner.gnm1.ann1.AMC2P5 Arachis hypogaea HOM05D004948 ORTHO05D005824 6.7e-45 184.9 175 56.6
Actinidia08617 Actinidia chinensis HOM05D004948 ORTHO05D005824 1.9e-44 183.3 144 68.8
Nitab4.5_0002176g0030 Nicotiana tabacum HOM05D004948 ORTHO05D005824 1.6e-43 180.3 125 75.2
Pp3c8_900 Physcomitrium patens HOM05D004948 ORTHO05D005824 4.8e-43 178.7 187 51.3
CSS0002011 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.5e-41 173.7 118 75.4
AagrBONN_evm.TU.Sc2ySwM_362.1882 Anthoceros agrestis HOM05D004948 ORTHO05D005824 2.9e-40 169.5 194 46.9
SMO361G0401 Selaginella moellendorffii HOM05D004948 ORTHO05D005824 5.0e-40 168.7 203 47.3
SHI54648 Sapria himalayana HOM05D004948 ORTHO05D005824 8.5e-40 167.9 164 57.3
SHI54754 Sapria himalayana HOM05D004948 ORTHO05D005824 8.5e-40 167.9 164 57.3
SEGI_09652 Sequoiadendron giganteum HOM05D004948 ORTHO05D005824 1.1e-39 167.5 137 65.0
CSS0025713 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.2e-35 153.3 105 75.2
CBR_g39340 Chara braunii HOM05D004948 ORTHO05D005824 2.2e-35 153.3 165 49.1
CSS0008262 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 6.3e-35 151.8 105 74.3
BolC9t57186H Brassica oleracea HOM05D004948 ORTHO05D005824 3.4e-33 146.0 214 44.4
BcaC04g20470 Brassica carinata HOM05D004948 ORTHO05D005824 1.3e-32 144.1 196 45.9
Lj1P1012T60 Lonicera japonica HOM05D004948 ORTHO05D005824 1.7e-32 143.7 108 68.5
C09p43150 Brassica napus HOM05D004948 ORTHO05D005824 1.1e-31 141.0 209 44.0
BcaB08g35692 Brassica carinata HOM05D004948 ORTHO05D005824 8.5e-24 114.8 87 65.5
Lalb_Chr23g0271431 Lupinus albus HOM05D004948 ORTHO05D005824 8.8e-21 104.8 157 43.3
MCO05G504 Micromonas commoda HOM05D004948 ORTHO05D005824 7.0e-18 95.1 198 31.8
CSS0011379 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 5.0e-08 62.4 57 54.4
CSS0007759 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 6.5e-08 62.0 75 46.7
CSS0022164 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.1e-07 61.2 71 49.3


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