Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0278271 Helianthus annuus HOM05D006708 ORTHO05D008321 5.6e-98 360.9 179 100.0
HanXRQChr10g0293331 Helianthus annuus HOM05D006708 ORTHO05D008321 6.3e-49 198.0 178 61.8
Lsat_1_v5_gn_1_39980 Lactuca sativa HOM05D006708 ORTHO05D008321 2.8e-41 172.6 178 53.9
Ciclev10005313m.g Citrus clementina HOM05D006708 ORTHO05D008321 8.2e-41 171.0 182 52.7
ECA233G5482 Erigeron canadensis HOM05D006708 ORTHO05D008321 1.2e-39 167.2 178 52.8
Atru.chr4.3165 Acer truncatum HOM05D006708 ORTHO05D008321 6.1e-36 154.8 178 48.9
Dinv29501 Davidia involucrata HOM05D006708 ORTHO05D008321 6.1e-36 154.8 178 48.3
Duzib151G0010 Durio zibethinus HOM05D006708 ORTHO05D008321 7.9e-36 154.5 178 49.4
Actinidia02537 Actinidia chinensis HOM05D006708 ORTHO05D008321 1.4e-35 153.7 178 48.3
Gohir.A02G058800 Gossypium hirsutum HOM05D006708 ORTHO05D008321 1.8e-35 153.3 178 48.3
Sc19g0002530 Simmondsia chinensis HOM05D006708 ORTHO05D008321 1.8e-35 153.3 178 48.9
Gorai.005G073000 Gossypium raimondii HOM05D006708 ORTHO05D008321 3.0e-35 152.5 178 48.3
QL06p014362 Quercus lobata HOM05D006708 ORTHO05D008321 6.7e-35 151.4 178 48.3
SalBow2G2621 Salvia bowleyana HOM05D006708 ORTHO05D008321 1.1e-34 150.6 178 46.6
TAR365G0272 Trochodendron aralioides HOM05D006708 ORTHO05D008321 1.1e-34 150.6 178 47.8
Gohir.D02G064500 Gossypium hirsutum HOM05D006708 ORTHO05D008321 1.5e-34 150.2 178 47.8
CSS0037344 Camellia sinensis var. sinensis HOM05D006708 ORTHO05D008321 2.0e-34 149.8 178 47.2
Thecc.04G313500 Theobroma cacao HOM05D006708 ORTHO05D008321 2.0e-34 149.8 178 48.3
Cpa.g.sc146.18 Carica papaya HOM05D006708 ORTHO05D008321 7.4e-34 147.9 178 47.2
unitig_747.g22054 Utricularia gibba HOM05D006708 ORTHO05D008321 1.7e-33 146.7 179 46.9
Peaxi162Scf00164g00315 Petunia axillaris HOM05D006708 ORTHO05D008321 2.2e-33 146.4 178 44.9
COL.COLO4_34511 Corchorus olitorius HOM05D006708 ORTHO05D008321 2.8e-33 146.0 178 47.8
Nitab4.5_0001769g0170 Nicotiana tabacum HOM05D006708 ORTHO05D008321 2.8e-33 146.0 178 44.9
FAN07G1828 Fragaria x ananassa HOM05D006708 ORTHO05D008321 4.8e-33 145.2 178 44.4
Oeu022711.1 Olea europaea HOM05D006708 ORTHO05D008321 4.8e-33 145.2 178 44.4
Manes.03G212000 Manihot esculenta HOM05D006708 ORTHO05D008321 6.3e-33 144.8 178 46.1
GSVIVG01017693001 Vitis vinifera HOM05D006708 ORTHO05D008321 6.3e-33 144.8 178 47.2
MSTRG.24854 Avicennia marina HOM05D006708 ORTHO05D008321 8.2e-33 144.4 178 44.9
Haze_12609 Corylus avellana HOM05D006708 ORTHO05D008321 8.2e-33 144.4 178 47.2
Haze_12620 Corylus avellana HOM05D006708 ORTHO05D008321 8.2e-33 144.4 178 47.2
arahy.Tifrunner.gnm1.ann1.H7T0W5 Arachis hypogaea HOM05D006708 ORTHO05D008321 1.1e-32 144.1 178 47.2
arahy.Tifrunner.gnm1.ann1.YU479Z Arachis hypogaea HOM05D006708 ORTHO05D008321 1.1e-32 144.1 178 47.2
FvH4_4g21570 Fragaria vesca HOM05D006708 ORTHO05D008321 1.1e-32 144.1 178 44.4
FAN17G2628 Fragaria x ananassa HOM05D006708 ORTHO05D008321 1.1e-32 144.1 178 43.8
Lj6A702T41 Lonicera japonica HOM05D006708 ORTHO05D008321 1.1e-32 144.1 178 45.5
Potri.008G206200 Populus trichocarpa HOM05D006708 ORTHO05D008321 1.1e-32 144.1 178 47.8
CAN.G305.34 Capsicum annuum HOM05D006708 ORTHO05D008321 1.8e-32 143.3 178 43.8
Cfa014219 Carpinus fangiana HOM05D006708 ORTHO05D008321 1.8e-32 143.3 178 47.2
PGR031G3511 Punica granatum HOM05D006708 ORTHO05D008321 1.8e-32 143.3 178 44.9
Sed0006346 Sechium edule HOM05D006708 ORTHO05D008321 1.8e-32 143.3 178 44.9
Glyma.17G041000 Glycine max HOM05D006708 ORTHO05D008321 2.4e-32 142.9 178 45.5
Solyc05g053190.3 Solanum lycopersicum HOM05D006708 ORTHO05D008321 4.1e-32 142.1 178 44.4
Sopen05g031700 Solanum pennellii HOM05D006708 ORTHO05D008321 4.1e-32 142.1 178 44.4
PGSC0003DMG400027203 Solanum tuberosum HOM05D006708 ORTHO05D008321 4.1e-32 142.1 178 44.4
CsaV3_6G000260 Cucumis sativus L. HOM05D006708 ORTHO05D008321 5.3e-32 141.7 178 44.9
DCAR_023411 Daucus carota HOM05D006708 ORTHO05D008321 5.3e-32 141.7 178 44.4
MD13G1140300 Malus domestica HOM05D006708 ORTHO05D008321 5.3e-32 141.7 178 43.3
Eucgr.B03960 Eucalyptus grandis HOM05D006708 ORTHO05D008321 7.0e-32 141.4 178 47.2
Nitab4.5_0000745g0080 Nicotiana tabacum HOM05D006708 ORTHO05D008321 7.0e-32 141.4 178 43.8
MELO3C021228.2 Cucumis melo HOM05D006708 ORTHO05D008321 9.1e-32 141.0 178 44.9
FAN12G1816 Fragaria x ananassa HOM05D006708 ORTHO05D008321 1.2e-31 140.6 178 43.8
Ca_21374_v3 Cicer arietinum L. HOM05D006708 ORTHO05D008321 1.5e-31 140.2 178 44.4
Phvul.003G122200 Phaseolus vulgaris HOM05D006708 ORTHO05D008321 1.5e-31 140.2 178 45.5
Hund22645 Selenicereus undatus HOM05D006708 ORTHO05D008321 2.0e-31 139.8 178 44.9
Lalb_Chr18g0047341 Lupinus albus HOM05D006708 ORTHO05D008321 3.5e-31 139.0 178 43.8
Rhsim12G0000100 Rhododendron simsii HOM05D006708 ORTHO05D007921 3.5e-31 139.0 184 45.7
Sabra08G0153200 Salix brachista HOM05D006708 ORTHO05D008321 3.5e-31 139.0 179 45.8
TPR.G12542 Trifolium pratense HOM05D006708 ORTHO05D008321 3.5e-31 139.0 178 44.4
TWI53G0094 Tripterygium wilfordii HOM05D006708 ORTHO05D008321 3.5e-31 139.0 178 44.4
VMungo1215G1693 Vigna mungo HOM05D006708 ORTHO05D008321 3.5e-31 139.0 178 45.5
AUR62029962 Chenopodium quinoa HOM05D006708 ORTHO05D008321 4.5e-31 138.7 178 44.4
CANSAT64G0974 Cannabis sativa HOM05D006708 ORTHO05D008321 5.9e-31 138.3 178 42.7
Nn3g21927 Nelumbo nucifera HOM05D006708 ORTHO05D008321 5.9e-31 138.3 178 43.8
Cc03_g00080 Coffea canephora HOM05D006708 ORTHO05D008321 7.7e-31 137.9 178 44.9
RcHm_v2.0_Chr4g0427681 Rosa chinensis HOM05D006708 ORTHO05D008321 1.7e-30 136.7 178 41.6
C03p42560 Brassica napus HOM05D006708 ORTHO05D008321 2.9e-30 136.0 178 43.8
BolC3t16526H Brassica oleracea HOM05D006708 ORTHO05D008321 2.9e-30 136.0 178 43.8
Medtr4g123970 Medicago truncatula HOM05D006708 ORTHO05D008321 2.9e-30 136.0 178 42.7
EL10Ac3g06239 Beta vulgaris HOM05D006708 ORTHO05D008321 5.0e-30 135.2 178 43.3
Migut.A01089 Erythranthe guttata HOM05D006708 ORTHO05D008321 1.1e-29 134.0 177 41.8
Lj4g0015836 Lotus japonicus HOM05D006708 ORTHO05D008321 1.1e-29 134.0 178 42.7
Psat4g021160 Pisum sativum HOM05D006708 ORTHO05D008321 1.1e-29 134.0 178 42.1
A03p34980 Brassica napus HOM05D006708 ORTHO05D008321 1.5e-29 133.7 178 43.8
BraA03t12678Z Brassica rapa HOM05D006708 ORTHO05D008321 1.5e-29 133.7 178 43.8
Sp3g05900 Schrenkiella parvula HOM05D006708 ORTHO05D008321 1.5e-29 133.7 178 43.3
MD16G1135500 Malus domestica HOM05D006708 ORTHO05D008321 1.9e-29 133.3 173 42.8
PSO210G5816 Papaver somniferum HOM05D006708 ORTHO05D008321 7.2e-29 131.3 178 43.8
PSO761G0290 Papaver somniferum HOM05D006708 ORTHO05D008321 7.2e-29 131.3 178 43.8
THA.LOC104802685 Tarenaya hassleriana HOM05D006708 ORTHO05D008321 9.4e-29 131.0 178 43.3
Aqoxy2G02504 Aquilegia oxysepala HOM05D006708 ORTHO05D008321 1.2e-28 130.6 178 41.6
AUR62002543 Chenopodium quinoa HOM05D006708 ORTHO05D008321 2.7e-28 129.4 194 41.8
unitig_1.g29359 Utricularia gibba HOM05D006708 ORTHO05D008321 2.7e-28 129.4 178 41.6
ATR0796G062 Amborella trichopoda HOM05D006708 ORTHO05D008321 6.1e-28 128.3 178 41.6
Thhalv10022298m.g Eutrema salsugineum HOM05D006708 ORTHO05D008321 6.1e-28 128.3 178 42.7
Carub.0003s0647 Capsella rubella HOM05D006708 ORTHO05D008321 3.9e-27 125.6 179 41.9
CSS0015576 Camellia sinensis var. sinensis HOM05D006708 ORTHO05D008321 2.6e-26 122.9 178 41.0
Zm00001eb245280 Zea mays HOM05D006708 ORTHO05D008321 2.6e-26 122.9 178 41.6
Aa31LG5G17510 Aethionema arabicum HOM05D006708 ORTHO05D008321 3.3e-26 122.5 189 40.7
AT3G06950 Arabidopsis thaliana HOM05D006708 ORTHO05D008321 9.7e-26 120.9 179 41.9
CARHR081550 Cardamine hirsuta HOM05D006708 ORTHO05D008321 9.7e-26 120.9 179 41.3
AL3G18120 Arabidopsis lyrata HOM05D006708 ORTHO05D008321 2.8e-25 119.4 179 41.3
HPP92_001944 Vanilla planifolia HOM05D006708 ORTHO05D008321 7.0e-24 114.8 178 37.6
CSS0031150 Camellia sinensis var. sinensis HOM05D006708 ORTHO05D008321 1.2e-23 114.0 158 43.0
ClCG06G004170 Citrullus lanatus HOM05D006708 ORTHO05D008321 1.6e-23 113.6 178 39.9
Prupe.1G104700 Prunus persica HOM05D006708 ORTHO05D008321 2.3e-19 99.8 63 68.3
Hma1.2p1_0013F.1_g007850 Hydrangea macrophylla HOM05D006708 ORTHO05D008321 4.0e-19 99.0 63 66.7
CSS0021077 Camellia sinensis var. sinensis HOM05D006708 ORTHO05D008321 5.2e-19 98.6 144 43.1
SGA_v2.0_scaffold109G31012 Striga asiatica HOM05D006708 ORTHO05D008321 5.7e-18 95.1 62 66.1
Rhsim05G0000200 Rhododendron simsii HOM05D006708 ORTHO05D008321 8.3e-17 91.3 176 35.8
AagrBONN_evm.TU.Sc2ySwM_228.1603 Anthoceros agrestis HOM05D006708 ORTHO05D008321 7.0e-16 88.2 178 32.6
Pp3c21_5420 Physcomitrium patens HOM05D006708 ORTHO05D008321 2.7e-15 86.3 178 32.6
Glyma.13G119200 Glycine max HOM05D006708 ORTHO05D008321 7.7e-15 84.7 57 64.9
SMO361G0559 Selaginella moellendorffii HOM05D006708 ORTHO05D008321 8.5e-14 81.3 180 29.4
Mapoly0209s0002 Marchantia polymorpha HOM05D006708 ORTHO05D008321 2.0e-10 70.1 176 31.2
MCO13G233 Micromonas commoda HOM05D006708 ORTHO05D008321 2.6e-10 69.7 76 46.1
SEGI_02195 Sequoiadendron giganteum HOM05D006708 ORTHO05D008321 8.3e-09 64.7 135 31.9
CiPaw.01G128700 Carya illinoinensis HOM05D006708 ORTHO05D008321 1.1e-08 64.3 40 67.5
CBR_g55386 Chara braunii HOM05D006708 ORTHO05D008321 9.1e-08 61.2 175 28.6


User provided reference genes

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