Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0273121 Helianthus annuus HOM05D004830 ORTHO05D005310 3.9e-105 384.8 194 100.0
Lsat_1_v5_gn_4_80120 Lactuca sativa HOM05D004830 ORTHO05D005310 1.5e-67 260.0 147 87.1
ECA232G3637 Erigeron canadensis HOM05D004830 ORTHO05D005310 1.5e-59 233.4 147 78.9
CSS0034026 Camellia sinensis var. sinensis HOM05D004830 ORTHO05D005310 3.0e-57 225.7 173 67.6
Rhsim12G0174200 Rhododendron simsii HOM05D004830 ORTHO05D005310 1.3e-55 220.3 197 61.4
Oeu056012.1 Olea europaea HOM05D004830 ORTHO05D005310 1.2e-53 213.8 175 62.9
Actinidia08868 Actinidia chinensis HOM05D004830 ORTHO05D005310 2.7e-53 212.6 175 63.4
TAR622G0015 Trochodendron aralioides HOM05D004830 ORTHO05D005310 7.7e-53 211.1 175 62.9
MSTRG.11282 Avicennia marina HOM05D004830 ORTHO05D005310 3.8e-52 208.8 183 59.6
Atru.chr9.1044 Acer truncatum HOM05D004830 ORTHO05D005310 6.6e-52 208.0 176 62.5
CiPaw.11G008200 Carya illinoinensis HOM05D004830 ORTHO05D005310 6.6e-52 208.0 175 62.3
Manes.14G051600 Manihot esculenta HOM05D004830 ORTHO05D005310 6.6e-52 208.0 199 56.8
Cc00_g11930 Coffea canephora HOM05D004830 ORTHO05D005310 1.5e-51 206.8 156 66.7
Cfa018828 Carpinus fangiana HOM05D004830 ORTHO05D005310 2.5e-51 206.1 175 61.7
QL10p003269 Quercus lobata HOM05D004830 ORTHO05D005310 7.3e-51 204.5 177 59.9
Ciclev10022323m.g Citrus clementina HOM05D004830 ORTHO05D005310 1.2e-50 203.8 176 61.4
Aqoxy7G00964 Aquilegia oxysepala HOM05D004830 ORTHO05D005310 4.7e-50 201.8 199 54.8
Cpa.g.sc13.124 Carica papaya HOM05D004830 ORTHO05D005310 6.1e-50 201.4 185 57.8
COL.COLO4_28101 Corchorus olitorius HOM05D004830 ORTHO05D005310 6.1e-50 201.4 177 60.5
Migut.I00505 Erythranthe guttata HOM05D004830 ORTHO05D005310 6.1e-50 201.4 173 59.5
GSVIVG01008536001 Vitis vinifera HOM05D004830 ORTHO05D005310 6.1e-50 201.4 177 59.9
Prupe.5G151800 Prunus persica HOM05D004830 ORTHO05D005310 1.0e-49 200.7 177 58.8
Aqoxy5G03391 Aquilegia oxysepala HOM05D004830 ORTHO05D005310 2.3e-49 199.5 189 56.1
Duzib084G0035 Durio zibethinus HOM05D004830 ORTHO05D005310 5.2e-49 198.4 175 59.4
Lj5A97T92 Lonicera japonica HOM05D004830 ORTHO05D005310 5.2e-49 198.4 175 60.6
RcHm_v2.0_Chr7g0190301 Rosa chinensis HOM05D004830 ORTHO05D005310 6.8e-49 198.0 175 59.4
vmacro16674 Vaccinium macrocarpon HOM05D004830 ORTHO05D005310 8.9e-49 197.6 159 61.0
QL10p003237 Quercus lobata HOM05D004830 ORTHO05D005310 1.2e-48 197.2 177 57.6
Thecc.03G128400 Theobroma cacao HOM05D004830 ORTHO05D005310 1.5e-48 196.8 175 59.4
MD06G1142500 Malus domestica HOM05D004830 ORTHO05D005310 2.6e-48 196.1 175 58.3
QL10p003210 Quercus lobata HOM05D004830 ORTHO05D005310 4.4e-48 195.3 177 58.2
Potri.012G097200 Populus trichocarpa HOM05D004830 ORTHO05D005310 7.5e-48 194.5 176 60.8
ATR0561G210 Amborella trichopoda HOM05D004830 ORTHO05D005310 2.2e-47 193.0 176 59.7
Ca_24504_v3 Cicer arietinum L. HOM05D004830 ORTHO05D005310 1.1e-46 190.7 177 55.4
arahy.Tifrunner.gnm1.ann1.CC2DBD Arachis hypogaea HOM05D004830 ORTHO05D005310 4.1e-46 188.7 177 55.9
Gohir.A03G052400 Gossypium hirsutum HOM05D004830 ORTHO05D005310 1.6e-45 186.8 176 57.4
FAN13G1978 Fragaria x ananassa HOM05D004830 ORTHO05D005310 4.6e-45 185.3 175 57.1
Eucgr.K02732 Eucalyptus grandis HOM05D004830 ORTHO05D005310 5.9e-45 184.9 175 55.4
Lj1g0026153 Lotus japonicus HOM05D004830 ORTHO05D005310 5.9e-45 184.9 175 54.3
MBI13_g01839_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 5.9e-45 184.9 116 75.0
Nitab4.5_0002855g0030 Nicotiana tabacum HOM05D004830 ORTHO05D005310 5.9e-45 184.9 179 57.5
arahy.Tifrunner.gnm1.ann1.228PAQ Arachis hypogaea HOM05D004830 ORTHO05D005310 7.8e-45 184.5 177 55.4
Gorai.003G121000 Gossypium raimondii HOM05D004830 ORTHO05D005310 7.8e-45 184.5 176 57.4
Glyma.06G170600 Glycine max HOM05D004830 ORTHO05D005310 1.7e-44 183.3 182 51.6
Phvul.009G166700 Phaseolus vulgaris HOM05D004830 ORTHO05D005310 1.7e-44 183.3 175 53.7
VMungo1309G0155 Vigna mungo HOM05D004830 ORTHO05D005310 2.3e-44 183.0 175 53.7
Medtr3g089170 Medicago truncatula HOM05D004830 ORTHO05D005310 3.9e-44 182.2 175 53.7
FvH4_5g08220 Fragaria vesca HOM05D004830 ORTHO05D005310 5.0e-44 181.8 175 57.1
FAN18G1516 Fragaria x ananassa HOM05D004830 ORTHO05D005310 8.6e-44 181.0 175 56.6
Glyma.04G195400 Glycine max HOM05D004830 ORTHO05D005310 1.1e-43 180.6 175 52.0
ATR0332G003 Amborella trichopoda HOM05D004830 ORTHO05D005310 1.5e-43 180.3 176 57.4
Nitab4.5_0002062g0020 Nicotiana tabacum HOM05D004830 ORTHO05D005310 2.5e-43 179.5 177 56.5
Peaxi162Scf00536g00113 Petunia axillaris HOM05D004830 ORTHO05D005310 3.3e-43 179.1 188 53.7
FAN08G1417 Fragaria x ananassa HOM05D004830 ORTHO05D005310 4.3e-43 178.7 175 56.6
Lalb_Chr11g0069591 Lupinus albus HOM05D004830 ORTHO05D005310 1.6e-42 176.8 175 51.4
PSO063G3292 Papaver somniferum HOM05D004830 ORTHO05D005310 4.7e-42 175.3 175 54.3
PGR044G2645 Punica granatum HOM05D004830 ORTHO05D005310 6.2e-42 174.9 174 54.6
CDE02G3469 Ceratophyllum demersum HOM05D004830 ORTHO05D005310 1.8e-41 173.3 199 49.2
PSO782G4089 Papaver somniferum HOM05D004830 ORTHO05D005310 8.9e-41 171.0 175 52.6
Os08g0530500 Oryza sativa ssp. japonica HOM05D004830 ORTHO05D005310 1.5e-40 170.2 175 53.7
Haze_07222 Corylus avellana HOM05D004830 ORTHO05D005310 4.4e-40 168.7 147 59.2
unitig_8.g3032 Utricularia gibba HOM05D004830 ORTHO05D005310 4.9e-39 165.2 157 52.2
MBI11_g07465_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 1.6e-37 160.2 116 68.1
SEGI_37187 Sequoiadendron giganteum HOM05D004830 ORTHO05D005310 9.2e-30 134.4 117 54.7
ATR0307G071 Amborella trichopoda HOM05D004830 ORTHO05D005310 2.8e-26 122.9 117 53.8
TAR633G1142 Trochodendron aralioides HOM05D004830 ORTHO05D005310 2.6e-24 116.3 115 50.4
Gohir.D06G037550 Gossypium hirsutum HOM05D004830 ORTHO05D005310 2.2e-23 113.2 87 65.5
Nn7g37285 Nelumbo nucifera HOM05D004830 ORTHO05D005310 6.4e-23 111.7 175 37.7
Nn3g16476 Nelumbo nucifera HOM05D004830 ORTHO05D005310 2.4e-22 109.8 158 43.7
Duzib106G0998 Durio zibethinus HOM05D004830 ORTHO05D005310 1.2e-21 107.5 114 49.1
TWI34G0970 Tripterygium wilfordii HOM05D004830 ORTHO05D005310 1.2e-21 107.5 114 47.4
GSVIVG01029897001 Vitis vinifera HOM05D004830 ORTHO05D005310 1.2e-21 107.5 134 42.5
Aqoxy2G00040 Aquilegia oxysepala HOM05D004830 ORTHO05D005310 4.6e-21 105.5 151 41.7
COL.COLO4_33470 Corchorus olitorius HOM05D004830 ORTHO05D005310 6.0e-21 105.1 114 45.6
Dinv23140 Davidia involucrata HOM05D004830 ORTHO05D005310 7.8e-21 104.8 106 55.7
Thecc.05G236700 Theobroma cacao HOM05D004830 ORTHO05D005310 7.8e-21 104.8 114 47.4
Dinv14555 Davidia involucrata HOM05D004830 ORTHO05D005310 1.3e-20 104.0 111 44.1
RcHm_v2.0_Chr3g0495501 Rosa chinensis HOM05D004830 ORTHO05D005310 1.3e-20 104.0 120 43.3
Gohir.A11G224212 Gossypium hirsutum HOM05D004830 ORTHO05D005310 1.7e-20 103.6 118 44.9
PSO591G0293 Papaver somniferum HOM05D004830 ORTHO05D005310 1.7e-20 103.6 111 48.6
MBI19_g09302_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 3.0e-20 102.8 102 46.1
MBI19_g15087_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 3.0e-20 102.8 102 46.1
Manes.08G155600 Manihot esculenta HOM05D004830 ORTHO05D005310 3.0e-20 102.8 114 44.7
arahy.Tifrunner.gnm1.ann1.TSAG7F Arachis hypogaea HOM05D004830 ORTHO05D005310 3.9e-20 102.4 164 35.4
PSO832G0423 Papaver somniferum HOM05D004830 ORTHO05D005310 6.6e-20 101.7 111 47.7
Cpa.g.sc73.42 Carica papaya HOM05D004830 ORTHO05D005310 3.3e-19 99.4 114 43.0
Haze_20367 Corylus avellana HOM05D004830 ORTHO05D005310 3.3e-19 99.4 127 40.2
Lalb_Chr22g0358351 Lupinus albus HOM05D004830 ORTHO05D005310 3.3e-19 99.4 99 47.5
Gohir.D11G237500 Gossypium hirsutum HOM05D004830 ORTHO05D005310 7.3e-19 98.2 102 47.1
Gorai.007G250900 Gossypium raimondii HOM05D004830 ORTHO05D005310 7.3e-19 98.2 102 47.1
Atru.chr2.1607 Acer truncatum HOM05D004830 ORTHO05D005310 1.2e-18 97.4 160 36.9
Ciclev10032343m.g Citrus clementina HOM05D004830 ORTHO05D005310 1.2e-18 97.4 117 41.9
CiPaw.09G053100 Carya illinoinensis HOM05D004830 ORTHO05D005310 1.6e-18 97.1 117 44.4
Psat3g084280 Pisum sativum HOM05D004830 ORTHO05D005310 6.2e-18 95.1 123 39.8
QL07p015956 Quercus lobata HOM05D004830 ORTHO05D005310 1.4e-17 94.0 112 40.2
TPR.G26134 Trifolium pratense HOM05D004830 ORTHO05D005310 3.1e-17 92.8 60 68.3
Prupe.1G058500 Prunus persica HOM05D004830 ORTHO05D005310 5.2e-17 92.0 173 34.7
Migut.J01591 Erythranthe guttata HOM05D004830 ORTHO05D005310 8.9e-17 91.3 108 39.8
FAN28G2201 Fragaria x ananassa HOM05D004830 ORTHO05D005310 1.2e-16 90.9 115 40.9
FAN26G1469 Fragaria x ananassa HOM05D004830 ORTHO05D005310 1.5e-16 90.5 115 40.9
FvH4_1g29410 Fragaria vesca HOM05D004830 ORTHO05D005310 2.0e-16 90.1 115 40.9
FAN19G2808 Fragaria x ananassa HOM05D004830 ORTHO05D005310 2.0e-16 90.1 115 40.9
MSTRG.6264 Avicennia marina HOM05D004830 ORTHO05D005310 2.6e-16 89.7 108 42.6
Potri.013G068900 Populus trichocarpa HOM05D004830 ORTHO05D005310 3.4e-16 89.4 96 44.8
PGR042G2697 Punica granatum HOM05D004830 ORTHO05D005310 5.8e-16 88.6 122 39.3
Sabra13G0059800 Salix brachista HOM05D004830 ORTHO05D005310 5.8e-16 88.6 96 44.8
Ca_03431_v3 Cicer arietinum L. HOM05D004830 ORTHO05D005310 2.9e-15 86.3 113 39.8
Prupe.7G025800 Prunus persica HOM05D004830 ORTHO05D005310 2.9e-15 86.3 122 37.7
Lj1g0023159 Lotus japonicus HOM05D004830 ORTHO05D005310 4.9e-15 85.5 158 33.5
Glyma.19G121200 Glycine max HOM05D004830 ORTHO05D005310 1.1e-14 84.3 101 39.6
Eucgr.A02163 Eucalyptus grandis HOM05D004830 ORTHO05D005310 1.9e-14 83.6 97 41.2
TPR.G23653 Trifolium pratense HOM05D004830 ORTHO05D005310 2.4e-14 83.2 115 36.5
MD14G1012800 Malus domestica HOM05D004830 ORTHO05D005310 5.4e-14 82.0 102 40.2
Zm00001eb036570 Zea mays HOM05D004830 ORTHO05D005310 5.4e-14 82.0 155 36.1
RhsimUnG0023100 Rhododendron simsii HOM05D004830 ORTHO05D005310 6.0e-13 78.6 136 33.8
Gohir.D08G162001 Gossypium hirsutum HOM05D004830 ORTHO05D005310 7.8e-13 78.2 52 67.3
TPR.G26160 Trifolium pratense HOM05D004830 ORTHO05D005310 6.6e-12 75.1 119 42.9
Medtr7g087480 Medicago truncatula HOM05D004830 ORTHO05D005310 1.1e-11 74.3 99 39.4
Phvul.001G101700 Phaseolus vulgaris HOM05D004830 ORTHO05D005310 1.5e-11 73.9 111 37.8
VMungo1383G2348 Vigna mungo HOM05D004830 ORTHO05D005310 9.6e-11 71.2 105 38.1
Gohir.D03G114700 Gossypium hirsutum HOM05D004830 ORTHO05D005310 2.1e-10 70.1 100 44.0
AagrBONN_evm.TU.Sc2ySwM_344.609 Anthoceros agrestis HOM05D004830 ORTHO05D005310 1.3e-07 60.8 112 33.0
Cfa019887 Carpinus fangiana HOM05D004830 ORTHO05D005310 1.4e-06 57.4 127 28.3


User provided reference genes

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