Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0257941 Helianthus annuus HOM05D006344 ORTHO05D007744 4.3e-110 401.7 268 100.0
HanXRQChr17g0562521 Helianthus annuus HOM05D006344 ORTHO05D007744 2.8e-53 213.0 109 94.5
Lsat_1_v5_gn_4_39300 Lactuca sativa HOM05D006344 ORTHO05D007744 4.2e-41 172.6 109 77.1
ECA234G3853 Erigeron canadensis HOM05D006344 ORTHO05D007744 6.1e-40 168.7 109 78.0
DCAR_025059 Daucus carota HOM05D006344 ORTHO05D007744 8.2e-37 158.3 108 71.3
Dinv44052 Davidia involucrata HOM05D006344 ORTHO05D007744 1.8e-36 157.1 108 69.4
Potri.002G138600 Populus trichocarpa HOM05D006344 ORTHO05D007744 3.5e-35 152.9 108 68.5
CSS0047635 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 5.9e-35 152.1 108 69.4
CSS0005629 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 6.5e-34 148.7 108 68.5
Cfa011061 Carpinus fangiana HOM05D006344 ORTHO05D007744 8.8e-31 138.3 108 64.8
Sc26g0001660 Simmondsia chinensis HOM05D006344 ORTHO05D007744 1.2e-30 137.9 108 64.8
TAR375G1150 Trochodendron aralioides HOM05D006344 ORTHO05D007744 2.0e-30 137.1 131 55.0
Actinidia18353 Actinidia chinensis HOM05D006344 ORTHO05D007744 3.4e-30 136.3 108 64.8
QL04p029920 Quercus lobata HOM05D006344 ORTHO05D007744 3.4e-30 136.3 108 61.1
Hund17097 Selenicereus undatus HOM05D006344 ORTHO05D007744 9.7e-30 134.8 108 60.2
Haze_02860 Corylus avellana HOM05D006344 ORTHO05D007744 1.3e-29 134.4 108 63.0
Lalb_Chr12g0210531 Lupinus albus HOM05D006344 ORTHO05D007744 2.2e-29 133.7 108 57.4
Solyc10g037900.1 Solanum lycopersicum HOM05D006344 ORTHO05D007744 2.2e-29 133.7 110 59.1
arahy.Tifrunner.gnm1.ann1.7K9T15 Arachis hypogaea HOM05D006344 ORTHO05D007744 4.8e-29 132.5 108 59.3
Ciclev10019814m.g Citrus clementina HOM05D006344 ORTHO05D007744 4.8e-29 132.5 110 60.9
arahy.Tifrunner.gnm1.ann1.6KIV37 Arachis hypogaea HOM05D006344 ORTHO05D007744 6.3e-29 132.1 108 59.3
EL10Ac1g00751 Beta vulgaris HOM05D006344 ORTHO05D007744 8.3e-29 131.7 109 62.4
Eucgr.D01222 Eucalyptus grandis HOM05D006344 ORTHO05D007744 8.3e-29 131.7 109 65.1
Nitab4.5_0000228g0070 Nicotiana tabacum HOM05D006344 ORTHO05D007744 8.3e-29 131.7 108 59.3
Prupe.2G133500 Prunus persica HOM05D006344 ORTHO05D007744 8.3e-29 131.7 108 62.0
Peaxi162Scf00103g00912 Petunia axillaris HOM05D006344 ORTHO05D007744 1.1e-28 131.3 108 56.5
Cc02_g25170 Coffea canephora HOM05D006344 ORTHO05D007744 1.4e-28 131.0 108 62.0
Duzib133G0621 Durio zibethinus HOM05D006344 ORTHO05D007744 1.8e-28 130.6 108 61.1
Sopen10g011810 Solanum pennellii HOM05D006344 ORTHO05D007744 2.4e-28 130.2 108 60.2
Duzib138G0679 Durio zibethinus HOM05D006344 ORTHO05D007744 3.1e-28 129.8 108 59.3
Glyma.06G240000 Glycine max HOM05D006344 ORTHO05D007744 3.1e-28 129.8 108 60.2
SalBow8G3479 Salvia bowleyana HOM05D006344 ORTHO05D007744 4.1e-28 129.4 108 60.2
Nitab4.5_0009461g0020 Nicotiana tabacum HOM05D006344 ORTHO05D007744 5.3e-28 129.0 108 57.4
FAN10G0415 Fragaria x ananassa HOM05D006344 ORTHO05D007744 7.0e-28 128.6 144 50.0
FAN10G1159 Fragaria x ananassa HOM05D006344 ORTHO05D007744 7.0e-28 128.6 144 50.0
MD07G1109900 Malus domestica HOM05D006344 ORTHO05D007744 7.0e-28 128.6 108 62.0
Aqoxy3G02683 Aquilegia oxysepala HOM05D006344 ORTHO05D007744 9.1e-28 128.3 108 56.5
Cpa.g.sc22.25 Carica papaya HOM05D006344 ORTHO05D007744 9.1e-28 128.3 109 57.8
Sabra02G0107400 Salix brachista HOM05D006344 ORTHO05D007744 1.2e-27 127.9 147 50.3
PGSC0003DMG400026373 Solanum tuberosum HOM05D006344 ORTHO05D007744 1.2e-27 127.9 110 60.0
Gorai.008G109500 Gossypium raimondii HOM05D006344 ORTHO05D007744 1.6e-27 127.5 109 58.7
RcHm_v2.0_Chr1g0348081 Rosa chinensis HOM05D006344 ORTHO05D007744 1.6e-27 127.5 108 61.1
FAN01G1631 Fragaria x ananassa HOM05D006344 ORTHO05D007744 2.0e-27 127.1 108 59.3
Gohir.D12G100600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 2.0e-27 127.1 109 58.7
AUR62023399 Chenopodium quinoa HOM05D006344 ORTHO05D007744 4.5e-27 125.9 107 57.0
Glyma.12G152700 Glycine max HOM05D006344 ORTHO05D007744 4.5e-27 125.9 108 59.3
Gohir.A12G097600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 5.9e-27 125.6 109 58.7
AUR62013752 Chenopodium quinoa HOM05D006344 ORTHO05D007744 1.0e-26 124.8 107 57.9
Medtr8g007155 Medicago truncatula HOM05D006344 ORTHO05D007744 1.0e-26 124.8 108 56.5
THA.LOC104802498 Tarenaya hassleriana HOM05D006344 ORTHO05D007744 1.0e-26 124.8 108 58.3
TPR.G32142 Trifolium pratense HOM05D006344 ORTHO05D007744 1.0e-26 124.8 108 57.4
FvH4_7g10380 Fragaria vesca HOM05D006344 ORTHO05D007744 1.3e-26 124.4 108 58.3
FAN06G2435 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.3e-26 124.4 108 58.3
FAN06G3766 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.3e-26 124.4 108 58.3
Sed0012570 Sechium edule HOM05D006344 ORTHO05D007744 1.3e-26 124.4 127 51.2
GSVIVG01018294001 Vitis vinifera HOM05D006344 ORTHO05D007744 1.3e-26 124.4 108 57.4
CANSAT25G2006 Cannabis sativa HOM05D006344 ORTHO05D007744 2.2e-26 123.6 110 59.1
Ca_14805_v3 Cicer arietinum L. HOM05D006344 ORTHO05D007744 2.2e-26 123.6 108 55.6
MELO3C005945.2 Cucumis melo HOM05D006344 ORTHO05D007744 2.2e-26 123.6 108 56.5
COL.COLO4_10415 Corchorus olitorius HOM05D006344 ORTHO05D007744 5.0e-26 122.5 110 60.0
COL.COLO4_12394 Corchorus olitorius HOM05D006344 ORTHO05D007744 5.0e-26 122.5 108 61.1
VMungo0331G0733 Vigna mungo HOM05D006344 ORTHO05D007744 5.0e-26 122.5 108 57.4
Lj3g0017960 Lotus japonicus HOM05D006344 ORTHO05D007744 6.5e-26 122.1 109 57.8
Oeu011251.1 Olea europaea HOM05D006344 ORTHO05D007744 6.5e-26 122.1 144 47.2
vmacro13505 Vaccinium macrocarpon HOM05D006344 ORTHO05D007744 6.5e-26 122.1 108 56.5
MSTRG.20684 Avicennia marina HOM05D006344 ORTHO05D007744 8.5e-26 121.7 108 57.4
Manes.05G055800 Manihot esculenta HOM05D006344 ORTHO05D007744 1.1e-25 121.3 109 59.6
CsaV3_3G007240 Cucumis sativus L. HOM05D006344 ORTHO05D007744 1.9e-25 120.6 112 54.5
Thecc.01G396400 Theobroma cacao HOM05D006344 ORTHO05D007744 3.2e-25 119.8 103 57.3
CDE06G1994 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 5.5e-25 119.0 108 53.7
Psat4g223640 Pisum sativum HOM05D006344 ORTHO05D007744 7.2e-25 118.6 108 56.5
Migut.B01523 Erythranthe guttata HOM05D006344 ORTHO05D007744 9.4e-25 118.2 109 56.0
Thhalv10001417m.g Eutrema salsugineum HOM05D006344 ORTHO05D007744 9.4e-25 118.2 108 56.5
CAN.G768.2 Capsicum annuum HOM05D006344 ORTHO05D007744 1.2e-24 117.9 110 57.3
BcaB02g08857 Brassica carinata HOM05D006344 ORTHO05D007744 4.7e-24 115.9 108 55.6
Lj9C555G1 Lonicera japonica HOM05D006344 ORTHO05D007744 4.7e-24 115.9 64 81.2
Nn1g00813 Nelumbo nucifera HOM05D006344 ORTHO05D007744 4.7e-24 115.9 109 53.2
Phvul.010G046700 Phaseolus vulgaris HOM05D006344 ORTHO05D007744 4.7e-24 115.9 108 54.6
ATR0665G564 Amborella trichopoda HOM05D006344 ORTHO05D007744 8.0e-24 115.2 108 53.7
Sp4g26830 Schrenkiella parvula HOM05D006344 ORTHO05D007744 8.0e-24 115.2 108 54.6
PSO782G2130 Papaver somniferum HOM05D006344 ORTHO05D007744 1.0e-23 114.8 109 55.0
BraA05t19467Z Brassica rapa HOM05D006344 ORTHO05D007744 2.3e-23 113.6 126 50.8
TWI23G1150 Tripterygium wilfordii HOM05D006344 ORTHO05D007744 3.0e-23 113.2 108 53.7
AL4G43840 Arabidopsis lyrata HOM05D006344 ORTHO05D007744 4.0e-23 112.8 108 53.7
A05p04940 Brassica napus HOM05D006344 ORTHO05D007744 8.8e-23 111.7 108 54.6
BcaC02g12272 Brassica carinata HOM05D006344 ORTHO05D007744 1.2e-22 111.3 108 55.6
BolC4t22205H Brassica oleracea HOM05D006344 ORTHO05D007744 1.2e-22 111.3 108 55.6
C04p05760 Brassica napus HOM05D006344 ORTHO05D007744 3.4e-22 109.8 108 54.6
CARHR139980 Cardamine hirsuta HOM05D006344 ORTHO05D007744 3.4e-22 109.8 108 53.7
Carub.0004s2733 Capsella rubella HOM05D006344 ORTHO05D007744 4.4e-22 109.4 108 52.8
Rhsim07G0037100 Rhododendron simsii HOM05D006344 ORTHO05D007744 9.8e-22 108.2 109 52.3
SGA_v2.0_scaffold52G19234 Striga asiatica HOM05D006344 ORTHO05D007744 2.2e-21 107.1 108 52.8
AT2G44760 Arabidopsis thaliana HOM05D006344 ORTHO05D007744 3.7e-21 106.3 108 52.8
unitig_0.g1343 Utricularia gibba HOM05D006344 ORTHO05D007744 4.8e-21 105.9 121 50.4
FAN03G0097 Fragaria x ananassa HOM05D006344 ORTHO05D007744 3.1e-20 103.2 157 40.8
Aa31LG1G26310 Aethionema arabicum HOM05D006344 ORTHO05D007744 7.0e-20 102.1 143 42.0
Zm00001eb427880 Zea mays HOM05D006344 ORTHO05D007744 5.9e-19 99.0 108 47.2
HPP92_012970 Vanilla planifolia HOM05D006344 ORTHO05D007744 1.3e-18 97.8 106 48.1
Os04g0545200 Oryza sativa ssp. japonica HOM05D006344 ORTHO05D007744 6.6e-18 95.5 108 45.4
Atru.chr5.116 Acer truncatum HOM05D006344 ORTHO05D007744 1.2e-14 84.7 47 83.0
CiPaw.14G019800 Carya illinoinensis HOM05D006344 ORTHO05D007744 4.9e-13 79.3 108 44.4
ClCG05G000130 Citrullus lanatus HOM05D006344 ORTHO05D007744 1.2e-11 74.7 77 51.9
PGR004G1920 Punica granatum HOM05D006344 ORTHO05D007744 2.9e-10 70.1 77 51.9
AagrBONN_evm.TU.Sc2ySwM_117.1538 Anthoceros agrestis HOM05D006344 ORTHO05D007744 1.6e-08 64.3 50 64.0
COL.COLO4_10413 Corchorus olitorius HOM05D006344 ORTHO05D007744 2.1e-08 63.9 77 51.9
Lsat_1_v5_gn_7_20540 Lactuca sativa HOM05D003720 ORTHO05D007744 3.6e-08 63.2 31 90.3
Pp3c5_3810 Physcomitrium patens HOM05D006344 ORTHO05D007744 3.6e-08 63.2 101 43.6
HanXRQChr13g0415831 Helianthus annuus HOM05D000001 ORTHO05D009891 6.8e-07 58.9 26 92.3
SMO340G0133 Selaginella moellendorffii HOM05D002542 ORTHO05D007744 1.5e-06 57.8 52 53.8
SMO356G0573 Selaginella moellendorffii HOM05D002542 ORTHO05D005078 2.0e-06 57.4 52 53.8


User provided reference genes

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