Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0247681 Helianthus annuus HOM05D006976 ORTHO05D008761 1.8e-23 111.7 55 100.0
HanXRQChr01g0020351 Helianthus annuus HOM05D006976 ORTHO05D008761 1.0e-21 105.9 52 96.2
HanXRQChr10g0283561 Helianthus annuus HOM05D006976 ORTHO05D008761 1.0e-21 105.9 52 96.2
HanXRQChr10g0284251 Helianthus annuus HOM05D006976 ORTHO05D008761 1.0e-21 105.9 52 96.2
HanXRQChr10g0289271 Helianthus annuus HOM05D006976 ORTHO05D008761 1.0e-21 105.9 52 96.2
HanXRQChr10g0318191 Helianthus annuus HOM05D006976 ORTHO05D008761 1.0e-21 105.9 52 96.2
HanXRQChr11g0326831 Helianthus annuus HOM05D006976 ORTHO05D008761 1.0e-21 105.9 52 96.2
HanXRQChr15g0497531 Helianthus annuus HOM05D006976 ORTHO05D008761 1.0e-21 105.9 52 96.2
HanXRQChr16g0528991 Helianthus annuus HOM05D006976 ORTHO05D008761 1.0e-21 105.9 52 96.2
HanXRQCPg0580041 Helianthus annuus HOM05D006976 ORTHO05D008761 1.0e-21 105.9 52 96.2
HanXRQChr17g0548241 Helianthus annuus HOM05D006976 ORTHO05D008761 3.8e-21 104.0 50 98.0
PGR111G0047 Punica granatum HOM05D006976 ORTHO05D008761 1.9e-20 101.7 52 90.4
Eucgr.E01114 Eucalyptus grandis HOM05D006976 ORTHO05D008761 2.5e-20 101.3 52 88.5
EL10Ac4g09265 Beta vulgaris HOM05D006976 ORTHO05D008761 3.2e-20 100.9 52 90.4
FvH4_3g27991 Fragaria vesca HOM05D006976 ORTHO05D008761 7.1e-20 99.8 52 90.4
Prupe.7G029500 Prunus persica HOM05D006976 ORTHO05D008761 7.1e-20 99.8 52 90.4
RcHm_v2.0_CPg0502081 Rosa chinensis HOM05D006976 ORTHO05D008761 7.1e-20 99.8 52 90.4
Migut.D01165 Erythranthe guttata HOM05D006976 ORTHO05D008761 1.2e-19 99.0 52 90.4
Sed0001172 Sechium edule HOM05D006976 ORTHO05D008761 1.2e-19 99.0 52 90.4
EL10As15g24128 Beta vulgaris HOM05D000806 ORTHO05D002324 1.6e-19 98.6 50 90.0
SalBow1G3572 Salvia bowleyana HOM05D006976 ORTHO05D008761 1.6e-19 98.6 52 90.4
CAN.G129.10 Capsicum annuum HOM05D006976 ORTHO05D008761 2.1e-19 98.2 52 86.5
Eucgr.E02607 Eucalyptus grandis HOM05D006976 ORTHO05D008761 2.1e-19 98.2 49 89.8
Nn010s41441 Nelumbo nucifera HOM05D006976 ORTHO05D008761 2.7e-19 97.8 52 86.5
Nn2g14969 Nelumbo nucifera HOM05D006976 ORTHO05D008761 2.7e-19 97.8 52 86.5
arahy.Tifrunner.gnm1.ann1.L37WZG Arachis hypogaea HOM05D006976 ORTHO05D008761 7.9e-19 96.3 52 86.5
PSO548G0011 Papaver somniferum HOM05D006976 ORTHO05D008761 7.9e-19 96.3 52 88.5
QL93p0999_0001 Quercus lobata HOM05D006976 ORTHO05D008761 7.9e-19 96.3 52 90.4
AL2G20664 Arabidopsis lyrata HOM05D006976 ORTHO05D008761 1.0e-18 95.9 52 82.7
ATCG00530 Arabidopsis thaliana HOM05D006976 ORTHO05D008761 1.0e-18 95.9 52 82.7
BcaC03g16543 Brassica carinata HOM05D006976 ORTHO05D008761 1.0e-18 95.9 52 82.7
A06p23180 Brassica napus HOM05D006976 ORTHO05D008761 1.0e-18 95.9 52 82.7
C02p43530 Brassica napus HOM05D006976 ORTHO05D008761 1.0e-18 95.9 52 82.7
C09p40240 Brassica napus HOM05D006976 ORTHO05D008761 1.0e-18 95.9 52 82.7
BolC9t56930H Brassica oleracea HOM05D006976 ORTHO05D008761 1.0e-18 95.9 52 82.7
BolSC29t60590H Brassica oleracea HOM05D006976 ORTHO05D008761 1.0e-18 95.9 52 82.7
BolSC35t60749H Brassica oleracea HOM05D006976 ORTHO05D008761 1.0e-18 95.9 52 82.7
BolSC46t61034H Brassica oleracea HOM05D006976 ORTHO05D008761 1.0e-18 95.9 52 82.7
BolSC47t61096H Brassica oleracea HOM05D006976 ORTHO05D008761 1.0e-18 95.9 52 82.7
BraA06t25422Z Brassica rapa HOM05D006976 ORTHO05D008761 1.0e-18 95.9 52 82.7
BraSC25t45865Z Brassica rapa HOM05D006976 ORTHO05D008761 1.0e-18 95.9 52 82.7
CARHR282110 Cardamine hirsuta HOM05D006976 ORTHO05D008761 1.0e-18 95.9 52 82.7
Thhalv10010976m.g Eutrema salsugineum HOM05D006976 ORTHO05D008761 1.0e-18 95.9 52 82.7
Hund28750 Selenicereus undatus HOM05D006976 ORTHO05D008761 1.0e-18 95.9 52 88.5
Eucgr.I00197 Eucalyptus grandis HOM05D006976 ORTHO05D008761 3.0e-18 94.4 53 79.2
Glyma.07G028150 Glycine max HOM05D006976 ORTHO05D008761 3.0e-18 94.4 52 86.5
Potri.013G162300 Populus trichocarpa HOM05D006976 ORTHO05D008761 3.9e-18 94.0 52 84.6
Oeu012774.1 Olea europaea HOM05D006976 ORTHO05D008761 5.1e-18 93.6 52 84.6
Potri.016G094100 Populus trichocarpa HOM05D006976 ORTHO05D008761 5.1e-18 93.6 52 82.7
arahy.Tifrunner.gnm1.ann1.Z0BJS7 Arachis hypogaea HOM05D000806 ORTHO05D002324 6.7e-18 93.2 49 87.8
CAN.G232.11 Capsicum annuum HOM05D006976 ORTHO05D008761 6.7e-18 93.2 52 84.6
Lalb_Chr23g0274511 Lupinus albus HOM05D006976 ORTHO05D008761 6.7e-18 93.2 52 88.5
MD08G1223200 Malus domestica HOM05D006976 ORTHO05D008761 6.7e-18 93.2 52 82.7
Nn265s45957 Nelumbo nucifera HOM05D006976 ORTHO05D008761 6.7e-18 93.2 48 87.5
GSVIVG01037398001 Vitis vinifera HOM05D006976 ORTHO05D008761 6.7e-18 93.2 52 84.6
Hund29806 Selenicereus undatus HOM05D000806 ORTHO05D002324 8.7e-18 92.8 49 89.8
Eucgr.I02539 Eucalyptus grandis HOM05D006976 ORTHO05D008761 1.5e-17 92.0 52 82.7
GSVIVG01029875001 Vitis vinifera HOM05D006976 ORTHO05D008761 1.5e-17 92.0 51 86.3
Phvul.002G278108 Phaseolus vulgaris HOM05D006976 ORTHO05D008761 1.9e-17 91.7 52 82.7
Hund07993 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.9e-17 91.7 50 86.0
Gorai.012G112700 Gossypium raimondii HOM05D000806 ORTHO05D002324 3.3e-17 90.9 53 77.4
Lj2P1239T139 Lonicera japonica HOM05D006976 ORTHO05D008761 5.7e-17 90.1 52 82.7
DCAR_032496 Daucus carota HOM05D006976 ORTHO05D008761 7.4e-17 89.7 52 78.8
Nitab4.5_0002181g0030 Nicotiana tabacum HOM05D006976 ORTHO05D008761 3.7e-16 87.4 47 85.1
Gohir.D04G084920 Gossypium hirsutum HOM05D000806 ORTHO05D002324 4.8e-16 87.0 50 82.0
Gohir.A09G041060 Gossypium hirsutum HOM05D006976 ORTHO05D008761 6.2e-16 86.7 44 88.6
Glyma.14G104700 Glycine max HOM05D006976 ORTHO05D008761 1.1e-15 85.9 52 80.8
Gorai.012G094700 Gossypium raimondii HOM05D000806 ORTHO05D002324 1.1e-15 85.9 50 80.0
SEGI_11203 Sequoiadendron giganteum HOM05D006976 ORTHO05D008761 7.6e-14 79.7 52 67.3
Gorai.002G160100 Gossypium raimondii HOM05D006976 ORTHO05D008761 5.0e-13 77.0 42 83.3
HanXRQChr02g0044891 Helianthus annuus HOM05D006976 ORTHO05D008761 5.5e-12 73.6 35 97.1
Nitab4.5_0007680g0040 Nicotiana tabacum HOM05D006976 ORTHO05D008761 1.3e-10 68.9 35 91.4
HanXRQChr05g0161171 Helianthus annuus HOM05D006976 ORTHO05D008761 3.0e-10 67.8 32 96.9
BraSC25t45849Z Brassica rapa HOM05D006976 ORTHO05D008761 3.1e-07 57.8 32 75.0
Lalb_Chr03g0036051 Lupinus albus HOM05D006976 ORTHO05D008761 5.9e-06 53.5 38 63.2


User provided reference genes

Program Settings