Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 5.5e-50 200.7 101 100.0
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 2.3e-40 168.7 99 85.9
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 8.7e-40 166.8 99 83.8
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 7.4e-39 163.7 102 84.3
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 7.4e-39 163.7 102 82.4
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 7.4e-39 163.7 102 82.4
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 1.6e-38 162.5 99 81.8
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 2.8e-38 161.8 101 82.2
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 3.7e-38 161.4 101 83.2
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 3.7e-38 161.4 101 79.2
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 8.2e-38 160.2 101 80.2
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 1.1e-37 159.8 104 81.7
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 1.1e-37 159.8 101 81.2
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 9.0e-37 156.8 104 79.8
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 2.0e-36 155.6 107 80.4
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 2.0e-36 155.6 105 81.0
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 2.6e-36 155.2 105 79.0
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 5.9e-36 154.1 103 80.6
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 1.0e-35 153.3 102 75.5
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.0e-35 153.3 105 80.0
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 1.3e-35 152.9 106 78.3
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 1.3e-35 152.9 102 75.5
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 1.3e-35 152.9 103 78.6
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 1.7e-35 152.5 105 80.0
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 2.2e-35 152.1 103 79.6
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 2.9e-35 151.8 104 79.8
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 2.9e-35 151.8 105 81.0
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 2.9e-35 151.8 105 76.2
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 8.4e-35 150.2 96 82.3
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 1.9e-34 149.1 109 72.5
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 1.9e-34 149.1 101 77.2
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 2.5e-34 148.7 101 80.2
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 1.2e-33 146.4 104 77.9
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 1.6e-33 146.0 105 77.1
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 1.6e-33 146.0 102 77.5
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.6e-33 146.0 98 77.6
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.6e-33 146.0 98 77.6
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 2.1e-33 145.6 106 73.6
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 2.1e-33 145.6 102 71.6
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 3.5e-33 144.8 96 77.1
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 4.6e-33 144.4 107 72.0
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 4.6e-33 144.4 96 79.2
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 3.0e-32 141.7 102 77.5
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 3.0e-32 141.7 102 77.5
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 3.9e-32 141.4 102 77.5
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 3.9e-32 141.4 113 71.7
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 6.7e-32 140.6 96 72.9
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 1.1e-31 139.8 107 74.8
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 1.5e-31 139.4 104 74.0
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 3.3e-31 138.3 110 72.7
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 5.7e-31 137.5 102 71.6
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 9.7e-31 136.7 103 69.9
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 9.7e-31 136.7 103 70.9
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 1.3e-30 136.3 102 75.5
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 2.2e-30 135.6 97 76.3
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 2.8e-30 135.2 103 73.8
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 6.3e-30 134.0 112 66.1
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 6.3e-30 134.0 112 66.1
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 6.3e-30 134.0 106 73.6
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 8.2e-30 133.7 98 71.4
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 2.4e-29 132.1 112 68.8
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 2.4e-29 132.1 92 77.2
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 3.1e-29 131.7 97 76.3
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 9.0e-29 130.2 97 75.3
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 1.5e-28 129.4 106 70.8
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 2.0e-28 129.0 100 71.0
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 3.4e-28 128.3 113 65.5
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 3.4e-28 128.3 96 76.0
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 7.7e-28 127.1 103 71.8
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 7.7e-28 127.1 103 71.8
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 1.0e-27 126.7 109 66.1
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 1.3e-27 126.3 111 66.7
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 1.3e-27 126.3 106 69.8
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 1.3e-27 126.3 114 63.2
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 2.2e-27 125.6 112 65.2
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 5.0e-27 124.4 111 64.9
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 5.0e-27 124.4 85 76.5
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 6.5e-27 124.0 105 64.8
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 8.5e-27 123.6 108 63.9
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 8.5e-27 123.6 106 67.9
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 1.9e-26 122.5 109 67.9
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 2.5e-26 122.1 107 63.6
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 7.2e-26 120.6 113 65.5
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 7.2e-26 120.6 113 65.5
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 7.2e-26 120.6 104 63.5
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 9.4e-26 120.2 114 64.9
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 9.4e-26 120.2 111 64.9
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 1.2e-25 119.8 115 64.3
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 1.2e-25 119.8 101 58.4
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 2.7e-25 118.6 90 76.7
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 6.1e-25 117.5 84 73.8
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 1.4e-24 116.3 87 74.7
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 1.4e-24 116.3 116 57.8
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 5.1e-24 114.4 104 65.4
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 2.5e-23 112.1 104 65.4
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 2.5e-23 112.1 107 62.6
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 4.3e-23 111.3 107 64.5
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 4.3e-23 111.3 107 64.5
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 1.3e-22 109.8 112 61.6
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 3.7e-22 108.2 114 60.5
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 3.7e-22 108.2 108 60.2
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 1.1e-21 106.7 113 54.0
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 1.4e-21 106.3 90 70.0
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 3.1e-21 105.1 117 58.1
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 6.9e-21 104.0 109 56.9
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 1.2e-20 103.2 92 60.9
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 1.2e-20 103.2 100 55.0
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 2.6e-20 102.1 113 56.6
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 2.2e-19 99.0 88 68.2
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 3.2e-18 95.1 64 81.2
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 3.6e-17 91.7 58 79.3
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 1.4e-13 79.7 69 72.5
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 2.4e-13 79.0 82 61.0
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 2.4e-13 79.0 116 47.4
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 2.6e-12 75.5 87 58.6
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 1.0e-11 73.6 104 47.1
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 2.9e-11 72.0 57 73.7
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 1.0e-08 63.5 102 41.2
SMO308G0024 Selaginella moellendorffii HOM05D006768 ORTHO05D008436 1.4e-08 63.2 103 43.7
Nn1g08704 Nelumbo nucifera HOM05D006768 ORTHO05D008436 2.6e-07 58.9 51 72.5
DCAR_014111 Daucus carota HOM05D006768 ORTHO05D008436 9.7e-07 57.0 56 67.9


User provided reference genes

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