Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0059211 Helianthus annuus HOM05D001447 ORTHO05D005923 2.6e-71 271.9 138 100.0
HanXRQChr14g0441711 Helianthus annuus HOM05D001447 ORTHO05D005923 5.4e-24 114.8 271 37.6
HanXRQChr04g0117031 Helianthus annuus HOM05D001447 ORTHO05D005923 2.9e-17 92.4 71 77.5
TAR622G0649 Trochodendron aralioides HOM05D000050 ORTHO05D000654 5.4e-16 88.2 147 43.5
Lsat_1_v5_gn_2_28360 Lactuca sativa HOM05D001447 ORTHO05D005923 2.3e-11 72.8 70 61.4
LjContig00136g0008106 Lotus japonicus HOM05D001447 ORTHO05D005923 1.7e-09 66.6 70 55.7
QL01p018054 Quercus lobata HOM05D001447 ORTHO05D005923 1.7e-09 66.6 79 53.2
CSS0020855 Camellia sinensis var. sinensis HOM05D001447 ORTHO05D005923 3.7e-09 65.5 97 41.2
Cfa009826 Carpinus fangiana HOM05D001447 ORTHO05D008204 8.3e-09 64.3 70 55.7
CiPaw.13G153600 Carya illinoinensis HOM05D001447 ORTHO05D005923 1.4e-08 63.5 70 55.7
Haze_23187 Corylus avellana HOM05D001447 ORTHO05D005923 1.4e-08 63.5 70 54.3
ClCG02G023020 Citrullus lanatus HOM05D001447 ORTHO05D008204 1.9e-08 63.2 73 53.4
Nn2g15058 Nelumbo nucifera HOM05D001447 ORTHO05D005923 1.9e-08 63.2 71 52.1
Thecc.09G241000 Theobroma cacao HOM05D001447 ORTHO05D005923 1.9e-08 63.2 69 53.6
Oeu038401.1 Olea europaea HOM05D001447 ORTHO05D005923 2.4e-08 62.8 71 54.9
ECA234G3051 Erigeron canadensis HOM05D001447 ORTHO05D005923 3.2e-08 62.4 70 52.9
TAR369G0010 Trochodendron aralioides HOM05D001447 ORTHO05D005923 4.1e-08 62.0 71 53.5
Gohir.A09G111500 Gossypium hirsutum HOM05D001447 ORTHO05D005923 5.4e-08 61.6 69 52.2
Gohir.D09G108100 Gossypium hirsutum HOM05D001447 ORTHO05D005923 5.4e-08 61.6 69 52.2
Gorai.006G125800 Gossypium raimondii HOM05D001447 ORTHO05D005923 5.4e-08 61.6 69 52.2
RcHm_v2.0_Chr5g0051191 Rosa chinensis HOM05D001447 ORTHO05D005923 5.4e-08 61.6 70 50.0
CANSAT54G2333 Cannabis sativa HOM05D001447 ORTHO05D005923 7.1e-08 61.2 71 49.3
MELO3C014572.2 Cucumis melo HOM05D001447 ORTHO05D005923 7.1e-08 61.2 73 52.1
ECA233G1682 Erigeron canadensis HOM05D001447 ORTHO05D005923 7.1e-08 61.2 70 50.0
Lalb_Chr17g0336631 Lupinus albus HOM05D001447 ORTHO05D005923 1.6e-07 60.1 70 54.3
VMungo1383G2912 Vigna mungo HOM05D001447 ORTHO05D005923 1.6e-07 60.1 70 52.9
GSVIVG01031554001 Vitis vinifera HOM05D001447 ORTHO05D005923 1.6e-07 60.1 70 54.3
MD11G1187600 Malus domestica HOM05D001447 ORTHO05D005923 2.1e-07 59.7 111 38.7
Gohir.A05G070400 Gossypium hirsutum HOM05D001447 ORTHO05D005923 2.7e-07 59.3 68 51.5
PGR119G0225 Punica granatum HOM05D001447 ORTHO05D005923 2.7e-07 59.3 62 58.1
CsaV3_6G039120 Cucumis sativus L. HOM05D001447 ORTHO05D008204 3.5e-07 58.9 73 50.7
Atru.chr3.2630 Acer truncatum HOM05D001447 ORTHO05D005923 4.6e-07 58.5 52 61.5
MSTRG.11555 Avicennia marina HOM05D001447 ORTHO05D005923 4.6e-07 58.5 70 48.6
Gohir.D05G073400 Gossypium hirsutum HOM05D001447 ORTHO05D005923 6.0e-07 58.2 68 50.0
Gorai.009G074300 Gossypium raimondii HOM05D001447 ORTHO05D005923 6.0e-07 58.2 68 50.0
Rhsim13G0217200 Rhododendron simsii HOM05D001447 ORTHO05D005923 6.0e-07 58.2 76 50.0
Cc01_g06480 Coffea canephora HOM05D001447 ORTHO05D005923 7.8e-07 57.8 49 55.1
SalBow4G0828 Salvia bowleyana HOM05D001447 ORTHO05D005923 1.0e-06 57.4 71 46.5
Glyma.18G222500 Glycine max HOM05D001447 ORTHO05D005923 1.3e-06 57.0 70 50.0
Phvul.008G074800 Phaseolus vulgaris HOM05D001447 ORTHO05D005923 1.3e-06 57.0 69 50.7
CAN.G625.44 Capsicum annuum HOM05D001447 ORTHO05D005923 1.7e-06 56.6 70 50.0
Manes.06G161200 Manihot esculenta HOM05D001447 ORTHO05D005923 2.3e-06 56.2 70 48.6
Manes.09G003800 Manihot esculenta HOM05D001447 ORTHO05D005923 2.3e-06 56.2 70 48.6
TWI23G0345 Tripterygium wilfordii HOM05D001447 ORTHO05D005923 2.3e-06 56.2 70 50.0
Migut.O00259 Erythranthe guttata HOM05D001447 ORTHO05D005923 3.0e-06 55.8 73 46.6
Actinidia16355 Actinidia chinensis HOM05D001447 ORTHO05D005923 3.9e-06 55.5 70 47.1
Glyma.09G267400 Glycine max HOM05D001447 ORTHO05D005923 5.1e-06 55.1 70 48.6
TWI14G1124 Tripterygium wilfordii HOM05D001447 ORTHO05D005923 5.1e-06 55.1 70 47.1


User provided reference genes

Program Settings