Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0053631 Helianthus annuus HOM05D003500 ORTHO05D003919 3.3e-119 431.8 231 100.0
HanXRQChr17g0541731 Helianthus annuus HOM05D003500 ORTHO05D003919 5.3e-109 397.9 240 89.6
ECA233G0641 Erigeron canadensis HOM05D003500 ORTHO05D003919 2.0e-68 263.1 263 60.8
Lsat_1_v5_gn_6_63900 Lactuca sativa HOM05D003500 ORTHO05D003919 4.9e-46 188.7 212 52.4
Lsat_1_v5_gn_1_49081 Lactuca sativa HOM05D003500 ORTHO05D003919 1.2e-28 131.0 267 37.5
HanXRQChr01g0029371 Helianthus annuus HOM05D003500 ORTHO05D003919 3.3e-26 122.9 278 38.1
ECA248G2427 Erigeron canadensis HOM05D002222 ORTHO05D002354 2.9e-22 109.8 190 36.8
Dinv30238 Davidia involucrata HOM05D003500 ORTHO05D003919 1.9e-21 107.1 232 34.9
Dinv14210 Davidia involucrata HOM05D003500 ORTHO05D003919 1.2e-20 104.4 293 34.5
DCAR_003060 Daucus carota HOM05D003500 ORTHO05D003919 1.6e-20 104.0 265 34.7
CSS0048332 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 1.3e-19 100.9 292 32.2
Eucgr.C02880 Eucalyptus grandis HOM05D003500 ORTHO05D003919 1.9e-18 97.1 287 29.6
PGR044G1892 Punica granatum HOM05D003500 ORTHO05D003919 1.9e-18 97.1 288 33.0
QL12p026085 Quercus lobata HOM05D003500 ORTHO05D003919 1.9e-18 97.1 284 30.6
Lj8A606T22 Lonicera japonica HOM05D003500 ORTHO05D003919 7.4e-18 95.1 282 33.0
CANSAT35G1218 Cannabis sativa HOM05D003500 ORTHO05D003919 9.6e-18 94.7 294 29.9
Actinidia14650 Actinidia chinensis HOM05D003500 ORTHO05D003919 4.8e-17 92.4 295 32.9
CiPaw.07G208500 Carya illinoinensis HOM05D003500 ORTHO05D003919 4.8e-17 92.4 305 29.5
Rhsim07G0154900 Rhododendron simsii HOM05D003500 ORTHO05D003919 4.8e-17 92.4 283 32.2
Sabra18G0036300 Salix brachista HOM05D003500 ORTHO05D003919 2.4e-16 90.1 258 30.6
Actinidia15719 Actinidia chinensis HOM05D003500 ORTHO05D003919 2.0e-15 87.0 283 31.4
Hma1.2p1_0140F.1_g063720 Hydrangea macrophylla HOM05D003500 ORTHO05D003919 4.5e-15 85.9 298 29.5
Prupe.1G454700 Prunus persica HOM05D003500 ORTHO05D003919 4.5e-15 85.9 275 29.8
Gorai.001G029300 Gossypium raimondii HOM05D003500 ORTHO05D003919 2.9e-14 83.2 232 31.9
Cfa013328 Carpinus fangiana HOM05D003500 ORTHO05D003919 6.5e-14 82.0 292 28.4
TAR624G1157 Trochodendron aralioides HOM05D003500 ORTHO05D003919 6.5e-14 82.0 297 30.0
Manes.16G069800 Manihot esculenta HOM05D003500 ORTHO05D003919 1.1e-13 81.3 203 32.0
SGA_v2.0_scaffold169G38640 Striga asiatica HOM05D003500 ORTHO05D003919 1.1e-13 81.3 268 30.6
Potri.018G035800 Populus trichocarpa HOM05D003500 ORTHO05D003919 1.4e-13 80.9 257 30.0
Migut.E01507 Erythranthe guttata HOM05D003500 ORTHO05D003919 1.9e-13 80.5 267 32.6
Haze_21819 Corylus avellana HOM05D003500 ORTHO05D003919 5.5e-13 79.0 202 30.2
Oeu014656.1 Olea europaea HOM05D003500 ORTHO05D003919 5.5e-13 79.0 159 38.4
Thecc.09G037900 Theobroma cacao HOM05D003500 ORTHO05D003919 7.1e-13 78.6 130 36.9
PGR102G2146 Punica granatum HOM05D003500 ORTHO05D003919 1.2e-12 77.8 260 30.8
Atru.chr7.2303 Acer truncatum HOM05D003500 ORTHO05D003919 2.7e-12 76.6 202 31.7
Sc09g0008940 Simmondsia chinensis HOM05D003500 ORTHO05D003919 6.0e-12 75.5 264 28.8
Ciclev10009124m.g Citrus clementina HOM05D003500 ORTHO05D003919 1.3e-11 74.3 279 30.1
RcHm_v2.0_Chr6g0305551 Rosa chinensis HOM05D003500 ORTHO05D003919 1.3e-11 74.3 252 31.3
ClCG08G012430 Citrullus lanatus HOM05D003500 ORTHO05D003919 6.7e-11 72.0 288 28.1
Lalb_Chr03g0029341 Lupinus albus HOM05D003500 ORTHO05D003919 6.7e-11 72.0 264 27.7
MSTRG.14007 Avicennia marina HOM05D003500 ORTHO05D003919 8.7e-11 71.6 165 35.2
EL10Ac2g02525 Beta vulgaris HOM05D003500 ORTHO05D003919 1.1e-10 71.2 256 30.9
Gohir.D07G028000 Gossypium hirsutum HOM05D003500 ORTHO05D003919 1.1e-10 71.2 190 32.6
Nitab4.5_0002393g0050 Nicotiana tabacum HOM05D003500 ORTHO05D003919 1.9e-10 70.5 290 27.2
Potri.006G244600 Populus trichocarpa HOM05D003500 ORTHO05D003919 1.9e-10 70.5 162 35.2
TWI32G0121 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 1.9e-10 70.5 285 28.1
CsaV3_2G031120 Cucumis sativus L. HOM05D003500 ORTHO05D003919 3.3e-10 69.7 290 27.2
FAN20G2191 Fragaria x ananassa HOM05D003500 ORTHO05D003919 3.3e-10 69.7 258 29.1
vmacro05351 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 4.3e-10 69.3 223 34.1
Cfa002069 Carpinus fangiana HOM05D003500 ORTHO05D003919 5.7e-10 68.9 242 30.2
Solyc08g068060.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 5.7e-10 68.9 287 27.9
AUR62024822 Chenopodium quinoa HOM05D003500 ORTHO05D003919 7.4e-10 68.6 271 29.2
MD15G1099900 Malus domestica HOM05D003500 ORTHO05D003919 7.4e-10 68.6 295 26.4
Gohir.A07G024400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 1.3e-09 67.8 284 26.8
arahy.Tifrunner.gnm1.ann1.V41S3G Arachis hypogaea HOM05D003500 ORTHO05D003919 1.6e-09 67.4 265 26.8
Sed0000644 Sechium edule HOM05D003500 ORTHO05D003919 1.6e-09 67.4 161 32.9
AUR62032393 Chenopodium quinoa HOM05D003500 ORTHO05D003919 2.2e-09 67.0 271 28.4
Medtr6g007370 Medicago truncatula HOM05D003500 ORTHO05D003919 2.2e-09 67.0 253 28.5
Medtr7g446310 Medicago truncatula HOM05D003500 ORTHO05D003919 2.2e-09 67.0 253 28.5
Sc12g0009290 Simmondsia chinensis HOM05D003500 ORTHO05D003919 2.2e-09 67.0 266 26.3
CAN.G886.10 Capsicum annuum HOM05D003500 ORTHO05D003919 2.8e-09 66.6 292 27.7
PGSC0003DMG400014491 Solanum tuberosum HOM05D003500 ORTHO05D003919 2.8e-09 66.6 291 26.5
A01p05660 Brassica napus HOM05D003500 ORTHO05D003919 4.8e-09 65.9 280 28.6
Sopen08g021950 Solanum pennellii HOM05D003500 ORTHO05D003919 4.8e-09 65.9 291 25.8
TPR.G21779 Trifolium pratense HOM05D003500 ORTHO05D003919 6.3e-09 65.5 257 26.5
TWI18G0570 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 6.3e-09 65.5 256 28.1
Aqoxy7G01735 Aquilegia oxysepala HOM05D003500 ORTHO05D003919 8.2e-09 65.1 135 29.6
FvH4_2g36330 Fragaria vesca HOM05D003500 ORTHO05D003919 1.1e-08 64.7 258 27.5
Ca_26668_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 1.4e-08 64.3 256 28.1
FAN27G2449 Fragaria x ananassa HOM05D003500 ORTHO05D003919 1.4e-08 64.3 257 27.6
RcHm_v2.0_Chr2g0137891 Rosa chinensis HOM05D003500 ORTHO05D003919 1.4e-08 64.3 247 26.7
Potri.003G055200 Populus trichocarpa HOM05D003500 ORTHO05D003919 3.1e-08 63.2 270 27.0
Thecc.06G088400 Theobroma cacao HOM05D003500 ORTHO05D003919 3.1e-08 63.2 129 31.0
MELO3C011162.2 Cucumis melo HOM05D003500 ORTHO05D003919 5.3e-08 62.4 288 25.7
BcaC01g01007 Brassica carinata HOM05D003500 ORTHO05D003919 6.9e-08 62.0 259 28.6
Duzib168G0612 Durio zibethinus HOM05D003500 ORTHO05D003919 9.0e-08 61.6 287 24.4
Hund25650 Selenicereus undatus HOM05D003500 ORTHO05D003919 9.0e-08 61.6 261 27.2
PSO063G0209 Papaver somniferum HOM05D003500 ORTHO05D003919 1.2e-07 61.2 170 30.6
GSVIVG01035753001 Vitis vinifera HOM05D003500 ORTHO05D003919 1.2e-07 61.2 292 26.0
Ca_20390_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 1.5e-07 60.8 233 28.8
PSO782G3147 Papaver somniferum HOM05D003500 ORTHO05D003919 1.5e-07 60.8 167 30.5
BcaC09g52062 Brassica carinata HOM05D003500 ORTHO05D003919 2.6e-07 60.1 285 26.3
C03p87180 Brassica napus HOM05D003500 ORTHO05D003919 2.6e-07 60.1 271 27.7
BolC3t21020H Brassica oleracea HOM05D003500 ORTHO05D003919 2.6e-07 60.1 271 27.7
Cc08_g08590 Coffea canephora HOM05D003500 ORTHO05D003919 2.6e-07 60.1 271 28.8
Aa31LG2G16940 Aethionema arabicum HOM05D003500 ORTHO05D003919 3.4e-07 59.7 280 26.4
Sabra06G0191500 Salix brachista HOM05D003500 ORTHO05D003919 3.4e-07 59.7 70 45.7
arahy.Tifrunner.gnm1.ann1.HR3BJH Arachis hypogaea HOM05D003500 ORTHO05D003919 4.5e-07 59.3 259 26.6
BcaB03g12755 Brassica carinata HOM05D003500 ORTHO05D003919 4.5e-07 59.3 276 26.8
CARHR240660 Cardamine hirsuta HOM05D003500 ORTHO05D003919 4.5e-07 59.3 270 26.7
Psat7g063400 Pisum sativum HOM05D003500 ORTHO05D003919 5.9e-07 58.9 271 26.6
BraA01t00536Z Brassica rapa HOM05D003500 ORTHO05D003919 7.7e-07 58.5 271 28.4
TPR.G31013 Trifolium pratense HOM05D003500 ORTHO05D003919 7.7e-07 58.5 259 28.2
Migut.D01030 Erythranthe guttata HOM05D003500 ORTHO05D003919 1.0e-06 58.2 255 27.1
Migut.I00867 Erythranthe guttata HOM05D003500 ORTHO05D003919 1.0e-06 58.2 236 26.3
AL7G19060 Arabidopsis lyrata HOM05D003500 ORTHO05D003919 1.3e-06 57.8 272 26.1
Ah.10g025530 Amaranthus hybridus HOM05D003500 ORTHO05D003919 2.2e-06 57.0 262 27.9
Duzib187G1538 Durio zibethinus HOM05D003500 ORTHO05D003919 2.2e-06 57.0 190 24.2
HPP92_005532 Vanilla planifolia HOM05D003500 ORTHO05D003919 2.2e-06 57.0 190 30.5
TAR636G0685 Trochodendron aralioides HOM05D003500 ORTHO05D003919 2.9e-06 56.6 263 27.8
BraA08t33760Z Brassica rapa HOM05D003500 ORTHO05D003919 5.0e-06 55.8 278 27.3
Gorai.002G059400 Gossypium raimondii HOM05D003500 ORTHO05D003919 6.5e-06 55.5 225 27.1
THA.LOC104818564 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 6.5e-06 55.5 283 25.4
BolC1t00621H Brassica oleracea HOM05D003500 ORTHO05D003919 8.5e-06 55.1 262 28.2
COL.COLO4_30382 Corchorus olitorius HOM05D003500 ORTHO05D003919 8.5e-06 55.1 248 25.4
Eucgr.F03015 Eucalyptus grandis HOM05D003500 ORTHO05D003919 8.5e-06 55.1 235 27.2
Thhalv10025931m.g Eutrema salsugineum HOM05D003500 ORTHO05D003919 8.5e-06 55.1 282 26.6
MD17G1194800 Malus domestica HOM05D003500 ORTHO05D003919 8.5e-06 55.1 264 26.5


User provided reference genes

Program Settings