Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_020359 Vanilla planifolia HOM05D004029 ORTHO05D004613 2.6e-109 398.7 196 100.0
Aqoxy7G04099 Aquilegia oxysepala HOM05D004029 ORTHO05D004613 1.3e-95 353.2 194 86.6
Eucgr.F03341 Eucalyptus grandis HOM05D004029 ORTHO05D004613 3.7e-95 351.7 194 82.5
CANSAT11G2434 Cannabis sativa HOM05D004029 ORTHO05D004613 6.3e-95 350.9 194 84.0
Thecc.07G074600 Theobroma cacao HOM05D004029 ORTHO05D004613 1.1e-94 350.1 194 83.0
COL.COLO4_03559 Corchorus olitorius HOM05D004029 ORTHO05D004613 1.4e-94 349.7 194 83.0
Duzib268G1628 Durio zibethinus HOM05D004029 ORTHO05D004613 1.8e-94 349.4 194 82.5
TWI38G0763 Tripterygium wilfordii HOM05D004029 ORTHO05D004613 4.1e-94 348.2 194 82.5
Nn1g03970 Nelumbo nucifera HOM05D004029 ORTHO05D004613 7.0e-94 347.4 194 84.5
PGR031G0420 Punica granatum HOM05D004029 ORTHO05D004613 1.2e-93 346.7 194 82.5
Ciclev10007273m.g Citrus clementina HOM05D004029 ORTHO05D004613 2.0e-93 345.9 194 80.9
TAR627G0431 Trochodendron aralioides HOM05D004029 ORTHO05D004613 2.0e-93 345.9 194 83.0
Zm00001eb137170 Zea mays HOM05D004029 ORTHO05D004613 3.5e-93 345.1 194 82.5
ATR0064G128 Amborella trichopoda HOM05D004029 ORTHO05D004613 7.7e-93 344.0 194 83.0
GSVIVG01014409001 Vitis vinifera HOM05D004029 ORTHO05D004613 7.7e-93 344.0 194 83.0
Os12g0554400 Oryza sativa ssp. japonica HOM05D004029 ORTHO05D004613 1.0e-92 343.6 194 82.0
Sabra11G0109200 Salix brachista HOM05D004029 ORTHO05D004613 2.3e-92 342.4 194 79.9
MD03G1222200 Malus domestica HOM05D004029 ORTHO05D004613 2.9e-92 342.0 194 82.0
CSS0001233 Camellia sinensis var. sinensis HOM05D004029 ORTHO05D004613 3.8e-92 341.7 194 82.0
CSS0038840 Camellia sinensis var. sinensis HOM05D004029 ORTHO05D004613 3.8e-92 341.7 194 82.0
Duzib213G0443 Durio zibethinus HOM05D004029 ORTHO05D004613 6.5e-92 340.9 194 79.9
Manes.03G114700 Manihot esculenta HOM05D004029 ORTHO05D004613 8.6e-92 340.5 194 81.4
Gohir.A01G067000 Gossypium hirsutum HOM05D004029 ORTHO05D004613 1.5e-91 339.7 194 79.4
Gohir.D01G054200 Gossypium hirsutum HOM05D004029 ORTHO05D004613 1.5e-91 339.7 194 79.4
Gorai.002G074000 Gossypium raimondii HOM05D004029 ORTHO05D004613 1.5e-91 339.7 194 79.4
MD11G1239600 Malus domestica HOM05D004029 ORTHO05D004613 1.5e-91 339.7 194 81.4
Sed0019496 Sechium edule HOM05D004029 ORTHO05D004613 2.5e-91 339.0 194 82.0
CsaV3_3G044490 Cucumis sativus L. HOM05D004029 ORTHO05D004613 4.2e-91 338.2 194 82.0
Thhalv10012467m.g Eutrema salsugineum HOM05D004029 ORTHO05D004613 4.2e-91 338.2 194 82.0
DCAR_013079 Daucus carota HOM05D004029 ORTHO05D004613 5.5e-91 337.8 194 79.9
THA.LOC104811852 Tarenaya hassleriana HOM05D004029 ORTHO05D004613 5.5e-91 337.8 194 80.4
Potri.011G123900 Populus trichocarpa HOM05D004029 ORTHO05D004613 7.2e-91 337.4 194 78.9
EL10Ac4g08092 Beta vulgaris HOM05D004029 ORTHO05D004613 9.5e-91 337.0 194 78.4
Prupe.4G187500 Prunus persica HOM05D004029 ORTHO05D004613 9.5e-91 337.0 194 81.4
CAN.G162.91 Capsicum annuum HOM05D004029 ORTHO05D004613 1.6e-90 336.3 194 79.9
CARHR267710 Cardamine hirsuta HOM05D004029 ORTHO05D004613 1.6e-90 336.3 194 80.9
Phvul.005G085200 Phaseolus vulgaris HOM05D004029 ORTHO05D004613 1.6e-90 336.3 194 80.4
Sp6g16420 Schrenkiella parvula HOM05D004029 ORTHO05D004613 2.8e-90 335.5 194 81.4
AUR62015624 Chenopodium quinoa HOM05D004029 ORTHO05D004613 3.6e-90 335.1 194 78.9
BcaC03g14313 Brassica carinata HOM05D004029 ORTHO05D004613 4.7e-90 334.7 194 79.9
A02p10290 Brassica napus HOM05D004029 ORTHO05D004613 4.7e-90 334.7 194 79.9
C02p17030 Brassica napus HOM05D004029 ORTHO05D004613 4.7e-90 334.7 194 79.9
BolC2t07800H Brassica oleracea HOM05D004029 ORTHO05D004613 4.7e-90 334.7 194 79.9
BraA02t06097Z Brassica rapa HOM05D004029 ORTHO05D004613 4.7e-90 334.7 194 80.4
Cfa020529 Carpinus fangiana HOM05D004029 ORTHO05D004613 6.1e-90 334.3 194 79.9
CiPaw.11G174500 Carya illinoinensis HOM05D004029 ORTHO05D004613 6.1e-90 334.3 194 80.9
PSO541G4143 Papaver somniferum HOM05D004029 ORTHO05D004613 6.1e-90 334.3 194 80.9
Lj3g0020332 Lotus japonicus HOM05D004029 ORTHO05D004613 8.0e-90 334.0 194 80.9
Lalb_Chr25g0286611 Lupinus albus HOM05D004029 ORTHO05D004613 8.0e-90 334.0 194 79.4
AUR62029337 Chenopodium quinoa HOM05D004029 ORTHO05D004613 1.0e-89 333.6 194 78.4
BcaB05g22133 Brassica carinata HOM05D004029 ORTHO05D004613 1.4e-89 333.2 194 79.9
Hund02202 Selenicereus undatus HOM05D004029 ORTHO05D004613 1.4e-89 333.2 194 79.4
AT5G54440 Arabidopsis thaliana HOM05D004029 ORTHO05D004613 1.8e-89 332.8 194 80.4
Carub.0008s1474 Capsella rubella HOM05D004029 ORTHO05D004613 1.8e-89 332.8 194 80.4
Glyma.13G280700 Glycine max HOM05D004029 ORTHO05D004613 1.8e-89 332.8 194 78.9
Lj1C850G7 Lonicera japonica HOM05D004029 ORTHO05D004613 1.8e-89 332.8 194 80.4
Glyma.12G220900 Glycine max HOM05D004029 ORTHO05D004613 2.3e-89 332.4 194 78.9
Sc03g0009690 Simmondsia chinensis HOM05D004029 ORTHO05D004613 2.3e-89 332.4 194 77.3
Ah.06g183680 Amaranthus hybridus HOM05D004029 ORTHO05D004613 5.2e-89 331.3 194 76.8
PSO675G2841 Papaver somniferum HOM05D004029 ORTHO05D004613 6.8e-89 330.9 194 80.4
Solyc07g063440.3 Solanum lycopersicum HOM05D004029 ORTHO05D004613 6.8e-89 330.9 194 78.4
Sopen07g031610 Solanum pennellii HOM05D004029 ORTHO05D004613 6.8e-89 330.9 194 78.4
Peaxi162Scf01111g00112 Petunia axillaris HOM05D004029 ORTHO05D004613 8.9e-89 330.5 194 78.4
arahy.Tifrunner.gnm1.ann1.3J4V9H Arachis hypogaea HOM05D004029 ORTHO05D004613 1.2e-88 330.1 194 79.4
HanXRQChr10g0289491 Helianthus annuus HOM05D004029 ORTHO05D004613 2.6e-88 328.9 194 78.4
Psat5g246120 Pisum sativum HOM05D004029 ORTHO05D004613 4.4e-88 328.2 194 79.4
QL08p019114 Quercus lobata HOM05D004029 ORTHO05D004613 4.4e-88 328.2 194 79.9
FvH4_3g20750 Fragaria vesca HOM05D004029 ORTHO05D004613 9.8e-88 327.0 194 78.9
FAN11G1114 Fragaria x ananassa HOM05D004029 ORTHO05D004613 9.8e-88 327.0 194 78.9
FAN16G1973 Fragaria x ananassa HOM05D004029 ORTHO05D004613 9.8e-88 327.0 194 78.9
FAN21G1497 Fragaria x ananassa HOM05D004029 ORTHO05D004613 9.8e-88 327.0 194 78.9
FAN25G1694 Fragaria x ananassa HOM05D004029 ORTHO05D004613 9.8e-88 327.0 194 78.9
Medtr2g080050 Medicago truncatula HOM05D004029 ORTHO05D004613 9.8e-88 327.0 194 78.4
Actinidia05171 Actinidia chinensis HOM05D004029 ORTHO05D004613 1.3e-87 326.6 194 77.8
Ca_01815_v3 Cicer arietinum L. HOM05D004029 ORTHO05D004613 1.7e-87 326.2 194 78.4
Ca_30535_v3 Cicer arietinum L. HOM05D004029 ORTHO05D004613 1.7e-87 326.2 194 78.4
C09p44730 Brassica napus HOM05D004029 ORTHO05D004613 3.7e-87 325.1 194 78.4
Lsat_1_v5_gn_9_95861 Lactuca sativa HOM05D004029 ORTHO05D004613 3.7e-87 325.1 194 77.3
RcHm_v2.0_Chr5g0034971 Rosa chinensis HOM05D004029 ORTHO05D004613 3.7e-87 325.1 194 78.4
Aa31LG3G10350 Aethionema arabicum HOM05D004029 ORTHO05D004613 4.9e-87 324.7 194 78.9
BcaB08g35795 Brassica carinata HOM05D004029 ORTHO05D004613 4.9e-87 324.7 194 78.4
Gorai.007G319300 Gossypium raimondii HOM05D004029 ORTHO05D004613 6.3e-87 324.3 194 74.2
MSTRG.12924 Avicennia marina HOM05D004029 ORTHO05D004613 1.8e-86 322.8 194 76.8
BcaC04g20340 Brassica carinata HOM05D004029 ORTHO05D004613 2.4e-86 322.4 194 77.8
BolC9t57346H Brassica oleracea HOM05D004029 ORTHO05D004613 2.4e-86 322.4 194 77.8
BraA10t43261Z Brassica rapa HOM05D004029 ORTHO05D004613 5.4e-86 321.2 195 77.9
SGA_v2.0_scaffold77G25216 Striga asiatica HOM05D004029 ORTHO05D004613 7.0e-86 320.9 194 76.8
A10p11660 Brassica napus HOM05D004029 ORTHO05D004613 1.6e-85 319.7 195 77.4
Migut.H01912 Erythranthe guttata HOM05D004029 ORTHO05D004613 2.0e-85 319.3 194 76.3
arahy.Tifrunner.gnm1.ann1.IWX37I Arachis hypogaea HOM05D004029 ORTHO05D004613 3.5e-85 318.5 209 73.7
ECA240G1154 Erigeron canadensis HOM05D004029 ORTHO05D004613 1.0e-84 317.0 194 78.4
Gohir.1Z049674 Gossypium hirsutum HOM05D004029 ORTHO05D004613 3.3e-83 312.0 193 74.6
Psat3g119680 Pisum sativum HOM05D004029 ORTHO05D004613 3.3e-83 312.0 194 76.8
Lalb_Chr01g0016971 Lupinus albus HOM05D004029 ORTHO05D004613 4.3e-83 311.6 194 74.2
vmacro11822 Vaccinium macrocarpon HOM05D004029 ORTHO05D004613 6.8e-81 304.3 173 80.3
Rhsim06G0193700 Rhododendron simsii HOM05D004029 ORTHO05D004613 8.9e-81 303.9 176 79.0
Rhsim06G0194500 Rhododendron simsii HOM05D004029 ORTHO05D004613 8.9e-81 303.9 176 79.0
Nitab4.5_0000815g0060 Nicotiana tabacum HOM05D004029 ORTHO05D004613 3.4e-80 302.0 174 80.5
Lsat_1_v5_gn_7_105721 Lactuca sativa HOM05D004029 ORTHO05D004613 1.3e-79 300.1 188 73.9
Atru.chr2.2810 Acer truncatum HOM05D004029 ORTHO05D004613 1.7e-79 299.7 172 80.8
Nitab4.5_0001204g0130 Nicotiana tabacum HOM05D004029 ORTHO05D004613 1.7e-79 299.7 174 79.3
Haze_09504 Corylus avellana HOM05D004029 ORTHO05D004613 2.9e-79 298.9 173 79.8
ClCG11G018320 Citrullus lanatus HOM05D004029 ORTHO05D004613 1.6e-77 293.1 190 74.2
HanXRQChr13g0386411 Helianthus annuus HOM05D004029 ORTHO05D004613 1.5e-72 276.6 194 68.0
Dinv08326 Davidia involucrata HOM05D004029 ORTHO05D004613 3.4e-72 275.4 159 82.4
Mapoly0031s0138 Marchantia polymorpha HOM05D004029 ORTHO05D004613 1.5e-67 260.0 194 61.9
SHI21494 Sapria himalayana HOM05D004029 ORTHO05D004613 1.9e-67 259.6 176 67.6
unitig_0.g2259 Utricularia gibba HOM05D004029 ORTHO05D004613 9.5e-67 257.3 159 78.6
ECA236G3046 Erigeron canadensis HOM05D004029 ORTHO05D004613 1.5e-59 233.4 174 63.8
Pp3c26_12060 Physcomitrium patens HOM05D004029 ORTHO05D004613 8.4e-55 217.6 185 56.8
Psat4g074000 Pisum sativum HOM05D004029 ORTHO05D004613 1.1e-54 217.2 122 80.3
AagrBONN_evm.TU.Sc2ySwM_344.2130 Anthoceros agrestis HOM05D004029 ORTHO05D004613 4.6e-53 211.8 192 50.0
HPP92_027774 Vanilla planifolia HOM05D004029 ORTHO05D004613 4.0e-49 198.7 98 100.0
Pp3c3_4080 Physcomitrium patens HOM05D004029 ORTHO05D004613 1.2e-45 187.2 174 51.7
VMungo1080G0798 Vigna mungo HOM05D004029 ORTHO05D004613 5.6e-43 178.3 97 81.4
Dinv22372 Davidia involucrata HOM05D004029 ORTHO05D004613 8.7e-36 154.5 111 68.5
Psat7g242400 Pisum sativum HOM05D004029 ORTHO05D004613 2.8e-34 149.4 102 71.6
SEGI_16455 Sequoiadendron giganteum HOM05D004029 ORTHO05D004613 3.5e-29 132.5 87 70.1
Atru.chr2.2808 Acer truncatum HOM05D004029 ORTHO05D004613 7.9e-21 104.8 55 80.0
CBR_g48013 Chara braunii HOM05D004029 ORTHO05D004613 1.0e-20 104.4 107 45.8
SEGI_17451 Sequoiadendron giganteum HOM05D004029 ORTHO05D004613 8.7e-20 101.3 62 72.6
Gohir.D11G296250 Gossypium hirsutum HOM05D004029 ORTHO05D004613 1.5e-16 90.5 55 61.8
Cre01.g003500 Chlamydomonas reinhardtii HOM05D004029 ORTHO05D004613 1.7e-10 70.5 107 37.4
Medtr4g126280 Medicago truncatula HOM05D004029 ORTHO05D004613 6.3e-10 68.6 39 71.8
Oeu008022.1 Olea europaea HOM05D004029 ORTHO05D004613 9.4e-06 54.7 30 70.0


User provided reference genes

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