Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_012316 Vanilla planifolia HOM05D006172 ORTHO05D005515 5.6e-92 340.9 169 100.0
HPP92_012400 Vanilla planifolia HOM05D006172 ORTHO05D005515 1.0e-48 197.2 202 57.9
TAR626G1786 Trochodendron aralioides HOM05D006172 ORTHO05D005515 4.4e-36 155.2 204 48.0
Nn1g07129 Nelumbo nucifera HOM05D006172 ORTHO05D005515 2.8e-35 152.5 99 75.8
GSVIVG01012726001 Vitis vinifera HOM05D006172 ORTHO05D005515 2.8e-35 152.5 206 46.1
PSO675G8381 Papaver somniferum HOM05D006172 ORTHO05D005515 4.9e-35 151.8 104 72.1
MELO3C007389.2 Cucumis melo HOM05D006172 ORTHO05D005515 1.4e-34 150.2 206 46.1
ClCG01G022000 Citrullus lanatus HOM05D006172 ORTHO05D005515 1.8e-34 149.8 207 46.4
ATR0794G123 Amborella trichopoda HOM05D006172 ORTHO05D005515 4.1e-34 148.7 203 45.8
Aqoxy1G02151 Aquilegia oxysepala HOM05D006172 ORTHO05D005515 1.2e-33 147.1 104 72.1
Sed0002789 Sechium edule HOM05D006172 ORTHO05D005515 2.7e-33 146.0 208 46.2
Haze_06799 Corylus avellana HOM05D006172 ORTHO05D005515 3.5e-33 145.6 205 46.3
Sc05g0009930 Simmondsia chinensis HOM05D006172 ORTHO05D005515 3.5e-33 145.6 201 45.8
arahy.Tifrunner.gnm1.ann1.3R4FRS Arachis hypogaea HOM05D006172 ORTHO05D005515 7.8e-33 144.4 97 76.3
arahy.Tifrunner.gnm1.ann1.GS5NL2 Arachis hypogaea HOM05D006172 ORTHO05D005515 1.0e-32 144.1 97 76.3
Lj1A1230T62 Lonicera japonica HOM05D006172 ORTHO05D005515 2.9e-32 142.5 96 77.1
Peaxi162Scf00627g00035 Petunia axillaris HOM05D006172 ORTHO05D005515 2.9e-32 142.5 110 66.4
Psat4g006680 Pisum sativum HOM05D006172 ORTHO05D005515 2.9e-32 142.5 207 44.9
CSS0050420 Camellia sinensis var. sinensis HOM05D006172 ORTHO05D005515 5.0e-32 141.7 202 45.0
QL05p073195 Quercus lobata HOM05D006172 ORTHO05D005515 5.0e-32 141.7 212 46.2
Eucgr.E04055 Eucalyptus grandis HOM05D006172 ORTHO05D005515 1.1e-31 140.6 210 45.2
Sc05g0009220 Simmondsia chinensis HOM05D006172 ORTHO05D005515 1.1e-31 140.6 201 45.3
Ca_21083_v3 Cicer arietinum L. HOM05D006172 ORTHO05D005515 1.5e-31 140.2 135 56.3
Ah.09g234910 Amaranthus hybridus HOM05D006172 ORTHO05D005515 1.9e-31 139.8 201 45.8
CSS0038964 Camellia sinensis var. sinensis HOM05D006172 ORTHO05D005515 1.9e-31 139.8 202 44.6
MD10G1321300 Malus domestica HOM05D006172 ORTHO05D005515 1.9e-31 139.8 210 43.3
Medtr4g132120 Medicago truncatula HOM05D006172 ORTHO05D005515 3.3e-31 139.0 207 43.5
TWI38G1682 Tripterygium wilfordii HOM05D006172 ORTHO05D005515 3.3e-31 139.0 102 68.6
Cpa.g.sc152.15 Carica papaya HOM05D006172 ORTHO05D005515 5.6e-31 138.3 102 68.6
Sopen05g034060 Solanum pennellii HOM05D006172 ORTHO05D005515 5.6e-31 138.3 110 64.5
Gohir.D05G173300 Gossypium hirsutum HOM05D006172 ORTHO05D005515 7.3e-31 137.9 208 41.3
Gorai.009G178500 Gossypium raimondii HOM05D006172 ORTHO05D005515 7.3e-31 137.9 208 41.3
CAN.G694.35 Capsicum annuum HOM05D006172 ORTHO05D005515 9.5e-31 137.5 207 43.0
DCAR_028182 Daucus carota HOM05D006172 ORTHO05D005515 9.5e-31 137.5 121 62.0
Duzib192G0085 Durio zibethinus HOM05D006172 ORTHO05D005515 9.5e-31 137.5 201 44.8
PGR042G0524 Punica granatum HOM05D006172 ORTHO05D005515 9.5e-31 137.5 204 45.1
CANSAT56G2229 Cannabis sativa HOM05D006172 ORTHO05D005515 1.2e-30 137.1 110 63.6
Cc09_g01690 Coffea canephora HOM05D006172 ORTHO05D005515 1.2e-30 137.1 213 42.3
Glyma.07G260400 Glycine max HOM05D006172 ORTHO05D005515 1.2e-30 137.1 205 42.9
Solyc05g055610.4 Solanum lycopersicum HOM05D006172 ORTHO05D005515 1.2e-30 137.1 110 63.6
VMungo1215G3219 Vigna mungo HOM05D006172 ORTHO05D005515 1.2e-30 137.1 97 70.1
Actinidia28669 Actinidia chinensis HOM05D006172 ORTHO05D005515 1.6e-30 136.7 201 43.8
Oeu013635.1 Olea europaea HOM05D006172 ORTHO05D005515 1.6e-30 136.7 216 42.6
Oeu013636.1 Olea europaea HOM05D006172 ORTHO05D005515 1.6e-30 136.7 216 42.6
Atru.chr10.2219 Acer truncatum HOM05D006172 ORTHO05D005515 2.1e-30 136.3 193 44.0
Atru.chr10.2224 Acer truncatum HOM05D006172 ORTHO05D005515 2.1e-30 136.3 193 44.0
COL.COLO4_31773 Corchorus olitorius HOM05D006172 ORTHO05D005515 2.1e-30 136.3 93 73.1
Gohir.A05G170200 Gossypium hirsutum HOM05D006172 ORTHO05D005515 2.1e-30 136.3 208 41.8
CAN.G694.33 Capsicum annuum HOM05D006172 ORTHO05D005515 2.8e-30 136.0 207 43.0
Nitab4.5_0006322g0020 Nicotiana tabacum HOM05D006172 ORTHO05D005515 2.8e-30 136.0 111 64.0
ECA236G0092 Erigeron canadensis HOM05D006172 ORTHO05D005515 3.6e-30 135.6 113 66.4
Nitab4.5_0000096g0040 Nicotiana tabacum HOM05D006172 ORTHO05D005515 3.6e-30 135.6 97 72.2
THA.LOC104813121 Tarenaya hassleriana HOM05D006172 ORTHO05D005515 3.6e-30 135.6 115 64.3
HanXRQChr05g0129541 Helianthus annuus HOM05D006172 ORTHO05D005515 4.7e-30 135.2 106 68.9
HanXRQChr05g0129551 Helianthus annuus HOM05D006172 ORTHO05D005515 4.7e-30 135.2 106 68.9
Lj4g0023330 Lotus japonicus HOM05D006172 ORTHO05D005515 6.1e-30 134.8 200 44.5
RcHm_v2.0_Chr5g0003171 Rosa chinensis HOM05D006172 ORTHO05D005515 8.0e-30 134.4 205 43.4
Lsat_1_v5_gn_7_15980 Lactuca sativa HOM05D006172 ORTHO05D005515 1.4e-29 133.7 104 68.3
vmacro03686 Vaccinium macrocarpon HOM05D006172 ORTHO05D005515 1.4e-29 133.7 236 39.8
AUR62021945 Chenopodium quinoa HOM05D006172 ORTHO05D005515 1.8e-29 133.3 99 71.7
Rhsim13G0154200 Rhododendron simsii HOM05D006172 ORTHO05D005515 1.8e-29 133.3 98 73.5
Hund21409 Selenicereus undatus HOM05D006172 ORTHO05D005515 2.3e-29 132.9 196 44.9
FvH4_3g02080 Fragaria vesca HOM05D006172 ORTHO05D005515 3.1e-29 132.5 99 70.7
FAN21G3941 Fragaria x ananassa HOM05D006172 ORTHO05D005515 3.1e-29 132.5 99 70.7
Aa31LG9G9740 Aethionema arabicum HOM05D006172 ORTHO05D005515 6.8e-29 131.3 209 41.6
Ciclev10018338m.g Citrus clementina HOM05D006172 ORTHO05D005515 6.8e-29 131.3 194 42.8
FAN25G0496 Fragaria x ananassa HOM05D006172 ORTHO05D005515 8.9e-29 131.0 210 42.4
BcaB01g02576 Brassica carinata HOM05D006172 ORTHO05D005515 1.5e-28 130.2 192 46.4
Thhalv10028391m.g Eutrema salsugineum HOM05D006172 ORTHO05D005515 1.5e-28 130.2 94 71.3
Sp6g04230 Schrenkiella parvula HOM05D006172 ORTHO05D005515 1.5e-28 130.2 94 71.3
Lalb_Chr13g0304211 Lupinus albus HOM05D006172 ORTHO05D005515 2.0e-28 129.8 96 68.8
A03p30170 Brassica napus HOM05D006172 ORTHO05D005515 3.4e-28 129.0 94 73.4
BraA03t12201Z Brassica rapa HOM05D006172 ORTHO05D005515 3.4e-28 129.0 94 73.4
EL10Ac8g20057 Beta vulgaris HOM05D006172 ORTHO05D005515 4.4e-28 128.6 132 58.3
C03p36400 Brassica napus HOM05D006172 ORTHO05D005515 4.4e-28 128.6 94 72.3
BolC3t15953H Brassica oleracea HOM05D006172 ORTHO05D005515 4.4e-28 128.6 94 72.3
Carub.0006s3250 Capsella rubella HOM05D006172 ORTHO05D005515 4.4e-28 128.6 98 69.4
AUR62012709 Chenopodium quinoa HOM05D006172 ORTHO05D005515 4.4e-28 128.6 99 70.7
SEGI_01208 Sequoiadendron giganteum HOM05D006172 ORTHO05D005515 7.5e-28 127.9 102 58.8
AT4G04670 Arabidopsis thaliana HOM05D006172 ORTHO05D005515 1.3e-27 127.1 94 69.1
AL6G48130 Arabidopsis lyrata HOM05D006172 ORTHO05D005515 2.2e-27 126.3 94 69.1
SGA_v2.0_scaffold4G01916 Striga asiatica HOM05D006172 ORTHO05D005515 2.2e-27 126.3 98 66.3
SHI02199 Sapria himalayana HOM05D006172 ORTHO05D005515 4.9e-27 125.2 109 62.4
CARHR252880 Cardamine hirsuta HOM05D006172 ORTHO05D005515 1.9e-26 123.2 204 40.2
Migut.M01317 Erythranthe guttata HOM05D006172 ORTHO05D005515 3.2e-26 122.5 105 62.9
SMO139G0125 Selaginella moellendorffii HOM05D006172 ORTHO05D005515 3.5e-25 119.0 122 52.5
Sabra04G0007400 Salix brachista HOM05D006172 ORTHO05D005515 4.6e-25 118.6 152 48.7
Potri.004G015200 Populus trichocarpa HOM05D006172 ORTHO05D005515 7.8e-25 117.9 94 67.0
CDE11G0148 Ceratophyllum demersum HOM05D006172 ORTHO05D005515 7.3e-23 111.3 136 50.0
Pp3c9_15020 Physcomitrium patens HOM05D006172 ORTHO05D005515 9.5e-23 110.9 96 57.3
Mapoly0137s0034 Marchantia polymorpha HOM05D006172 ORTHO05D005515 1.6e-22 110.2 95 55.8
AagrBONN_evm.TU.Sc2ySwM_362.1355 Anthoceros agrestis HOM05D006172 ORTHO05D005515 2.1e-22 109.8 101 51.5
CBR_g49836 Chara braunii HOM05D006172 ORTHO05D004693 2.8e-22 109.4 102 52.0
unitig_37.g12154 Utricularia gibba HOM05D006172 ORTHO05D005515 3.7e-19 99.0 83 62.7
MCO05G475 Micromonas commoda HOM05D006172 ORTHO05D005515 4.7e-14 82.0 105 43.8
Zm00001eb322630 Zea mays HOM05D006172 ORTHO05D005515 4.7e-14 82.0 58 67.2
PRCOL_00000475 Prasinoderma coloniale HOM05D006172 ORTHO05D005515 3.1e-13 79.3 94 43.6
Cre14.g626634 Chlamydomonas reinhardtii HOM05D006172 ORTHO05D005515 1.5e-12 77.0 97 43.3
QL03p014007 Quercus lobata HOM05D001565 ORTHO05D005515 1.1e-07 60.8 56 58.9
Cfa027274 Carpinus fangiana HOM05D006172 ORTHO05D005515 2.8e-06 56.2 121 38.8


User provided reference genes

Program Settings