Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_011640 Vanilla planifolia HOM05D006099 ORTHO05D007317 3.0e-63 245.0 119 100.0
Zm00001eb274410 Zea mays HOM05D006099 ORTHO05D007317 2.1e-24 115.9 82 62.2
PSO170G3285 Papaver somniferum HOM05D006099 ORTHO05D007317 4.3e-22 108.2 76 67.1
PSO063G7181 Papaver somniferum HOM05D006099 ORTHO05D007317 7.4e-22 107.5 76 65.8
Cfa013234 Carpinus fangiana HOM05D006099 ORTHO05D007317 1.3e-21 106.7 76 63.2
Lalb_Chr24g0402361 Lupinus albus HOM05D006099 ORTHO05D007317 2.2e-21 105.9 80 56.2
Phvul.001G057000 Phaseolus vulgaris HOM05D006099 ORTHO05D007317 2.2e-21 105.9 79 59.5
RcHm_v2.0_Chr6g0312441 Rosa chinensis HOM05D006099 ORTHO05D007317 2.2e-21 105.9 76 59.2
VMungo0647G0711 Vigna mungo HOM05D006099 ORTHO05D007317 4.8e-21 104.8 83 55.4
Gohir.D05G068900 Gossypium hirsutum HOM05D006099 ORTHO05D007317 8.2e-21 104.0 78 61.5
Gorai.009G069800 Gossypium raimondii HOM05D006099 ORTHO05D007317 8.2e-21 104.0 78 61.5
arahy.Tifrunner.gnm1.ann1.AEW87R Arachis hypogaea HOM05D006099 ORTHO05D007317 1.4e-20 103.2 76 59.2
Potri.018G001000 Populus trichocarpa HOM05D006099 ORTHO05D007317 1.4e-20 103.2 76 59.2
Thecc.09G001300 Theobroma cacao HOM05D006099 ORTHO05D007317 2.4e-20 102.4 76 61.8
TPR.G30957 Trifolium pratense HOM05D006099 ORTHO05D007317 6.9e-20 100.9 78 55.1
Eucgr.C02144 Eucalyptus grandis HOM05D006099 ORTHO05D007317 9.0e-20 100.5 76 57.9
Lj5g0025000 Lotus japonicus HOM05D006099 ORTHO05D007317 9.0e-20 100.5 80 53.8
Ciclev10009104m.g Citrus clementina HOM05D006099 ORTHO05D007317 1.2e-19 100.1 78 56.4
Duzib168G0660 Durio zibethinus HOM05D006099 ORTHO05D007317 1.2e-19 100.1 76 57.9
Gohir.A05G066400 Gossypium hirsutum HOM05D006099 ORTHO05D007317 1.2e-19 100.1 78 57.7
CiPaw.07G216100 Carya illinoinensis HOM05D006099 ORTHO05D007317 1.5e-19 99.8 76 60.5
Ca_27927_v3 Cicer arietinum L. HOM05D006099 ORTHO05D007317 1.5e-19 99.8 78 55.1
Medtr1g010130 Medicago truncatula HOM05D006099 ORTHO05D007317 2.0e-19 99.4 76 56.6
Nn4g25135 Nelumbo nucifera HOM05D006099 ORTHO05D007317 2.0e-19 99.4 76 57.9
QL12p030693 Quercus lobata HOM05D006099 ORTHO05D007317 2.0e-19 99.4 76 56.6
CANSAT25G1623 Cannabis sativa HOM05D006099 ORTHO05D007317 2.6e-19 99.0 76 59.2
Lj7A751T33 Lonicera japonica HOM05D006099 ORTHO05D007317 2.6e-19 99.0 76 56.6
Thhalv10025966m.g Eutrema salsugineum HOM05D006099 ORTHO05D007317 4.5e-19 98.2 85 56.5
ATR0626G128 Amborella trichopoda HOM05D006099 ORTHO05D007317 5.9e-19 97.8 67 62.7
CSS0009505 Camellia sinensis var. sinensis HOM05D006099 ORTHO05D007317 5.9e-19 97.8 85 48.2
C03p88160 Brassica napus HOM05D006099 ORTHO05D007317 7.7e-19 97.4 86 53.5
BolC3t21124H Brassica oleracea HOM05D006099 ORTHO05D007317 7.7e-19 97.4 86 53.5
AL7G20920 Arabidopsis lyrata HOM05D006099 ORTHO05D007317 1.7e-18 96.3 75 56.0
FvH4_2g30570 Fragaria vesca HOM05D006099 ORTHO05D007317 1.7e-18 96.3 76 52.6
MD08G1132300 Malus domestica HOM05D006099 ORTHO05D007317 1.7e-18 96.3 76 56.6
Rhsim07G0173500 Rhododendron simsii HOM05D006099 ORTHO05D007317 1.7e-18 96.3 79 50.6
AT4G31150 Arabidopsis thaliana HOM05D006099 ORTHO05D007317 2.2e-18 95.9 73 60.3
CsaV3_2G031500 Cucumis sativus L. HOM05D006099 ORTHO05D007317 2.9e-18 95.5 69 63.8
Sed0006978 Sechium edule HOM05D006099 ORTHO05D007317 2.9e-18 95.5 69 62.3
Actinidia03572 Actinidia chinensis HOM05D006099 ORTHO05D007317 5.0e-18 94.7 76 51.3
A08p18780 Brassica napus HOM05D006099 ORTHO05D007317 5.0e-18 94.7 75 56.0
BraA08t33839Z Brassica rapa HOM05D006099 ORTHO05D007317 5.0e-18 94.7 75 56.0
CARHR239060 Cardamine hirsuta HOM05D006099 ORTHO05D007317 5.0e-18 94.7 75 54.7
CDE06G2693 Ceratophyllum demersum HOM05D006099 ORTHO05D007317 6.5e-18 94.4 66 60.6
RcHm_v2.0_Chr6g0312501 Rosa chinensis HOM05D006099 ORTHO05D007317 6.5e-18 94.4 76 53.9
GSVIVG01035588001 Vitis vinifera HOM05D006099 ORTHO05D007317 6.5e-18 94.4 76 56.6
Carub.0007s0938 Capsella rubella HOM05D006099 ORTHO05D007317 8.5e-18 94.0 75 56.0
MBI16_g00820_MAGBIO Magnolia biondii HOM05D006099 ORTHO05D007317 8.5e-18 94.0 65 58.5
Cc00_g12770 Coffea canephora HOM05D006099 ORTHO05D007317 1.1e-17 93.6 76 55.3
Sp7g29030 Schrenkiella parvula HOM05D006099 ORTHO05D007317 1.1e-17 93.6 93 50.5
Haze_21663 Corylus avellana HOM05D006099 ORTHO05D007317 1.9e-17 92.8 65 63.1
Dinv37480 Davidia involucrata HOM05D006099 ORTHO05D007317 1.9e-17 92.8 74 59.5
Manes.15G141100 Manihot esculenta HOM05D006099 ORTHO05D007317 1.9e-17 92.8 76 52.6
ClCG08G012820 Citrullus lanatus HOM05D006099 ORTHO05D007317 2.5e-17 92.4 69 62.3
Aa31LG2G19160 Aethionema arabicum HOM05D006099 ORTHO05D007317 3.2e-17 92.0 75 54.7
Mapoly0013s0098 Marchantia polymorpha HOM05D006099 ORTHO05D007317 3.2e-17 92.0 76 56.6
PGR142G3206 Punica granatum HOM05D006099 ORTHO05D007317 5.5e-17 91.3 78 48.7
THA.LOC104803891 Tarenaya hassleriana HOM05D006099 ORTHO05D007317 5.5e-17 91.3 75 53.3
ECA240G1547 Erigeron canadensis HOM05D006099 ORTHO05D007317 7.2e-17 90.9 76 59.2
Solyc12g096280.2 Solanum lycopersicum HOM05D006099 ORTHO05D007317 7.2e-17 90.9 62 66.1
SGA_v2.0_scaffold27G11694 Striga asiatica HOM05D006099 ORTHO05D007317 7.2e-17 90.9 73 60.3
Sopen12g032140 Solanum pennellii HOM05D006099 ORTHO05D007317 1.6e-16 89.7 62 66.1
Sabra18G0005300 Salix brachista HOM05D002037 ORTHO05D002762 2.7e-16 89.0 84 53.6
Sc23g0004430 Simmondsia chinensis HOM05D006099 ORTHO05D007317 2.7e-16 89.0 70 60.0
CAN.G947.18 Capsicum annuum HOM05D006099 ORTHO05D007317 3.6e-16 88.6 71 60.6
Glyma.14G131200 Glycine max HOM05D006099 ORTHO05D007317 3.6e-16 88.6 66 56.1
arahy.Tifrunner.gnm1.ann1.ZJIP4K Arachis hypogaea HOM05D006099 ORTHO05D007317 4.6e-16 88.2 66 56.1
HanXRQChr13g0419831 Helianthus annuus HOM05D006099 ORTHO05D007317 4.6e-16 88.2 76 52.6
QL12p030880 Quercus lobata HOM05D006099 ORTHO05D007317 4.6e-16 88.2 65 56.9
Ah.11g044160 Amaranthus hybridus HOM05D006099 ORTHO05D007317 1.0e-15 87.0 70 55.7
HanXRQChr13g0419861 Helianthus annuus HOM05D006099 ORTHO05D007317 1.0e-15 87.0 76 52.6
AagrBONN_evm.TU.Sc2ySwM_228.1579 Anthoceros agrestis HOM05D006099 ORTHO05D007317 1.4e-15 86.7 68 55.9
FAN15G2948 Fragaria x ananassa HOM05D006099 ORTHO05D007317 1.4e-15 86.7 65 53.8
Nitab4.5_0001159g0110 Nicotiana tabacum HOM05D006099 ORTHO05D007317 3.0e-15 85.5 65 56.9
FAN27G0146 Fragaria x ananassa HOM05D006099 ORTHO05D007317 3.9e-15 85.1 65 50.8
FAN20G1258 Fragaria x ananassa HOM05D006099 ORTHO05D007317 5.1e-15 84.7 65 52.3
FAN20G1767 Fragaria x ananassa HOM05D006099 ORTHO05D007317 5.1e-15 84.7 65 52.3
FAN24G0140 Fragaria x ananassa HOM05D006099 ORTHO05D007317 8.8e-15 84.0 65 50.8
unitig_32.g10951 Utricularia gibba HOM05D006099 ORTHO05D007317 1.1e-14 83.6 88 50.0
DCAR_000694 Daucus carota HOM05D006099 ORTHO05D007317 2.5e-14 82.4 75 56.0
PGSC0003DMG400029284 Solanum tuberosum HOM05D006099 ORTHO05D007317 2.5e-14 82.4 64 54.7
MELO3C011207.2 Cucumis melo HOM05D006099 ORTHO05D007317 7.4e-14 80.9 56 62.5
Manes.15G141200 Manihot esculenta HOM05D006099 ORTHO05D007317 7.4e-14 80.9 72 47.2
Pp3c6_10670 Physcomitrium patens HOM05D006099 ORTHO05D007317 9.7e-14 80.5 65 52.3
SMO351G0465 Selaginella moellendorffii HOM05D006099 ORTHO05D007317 1.3e-13 80.1 68 51.5
AUR62020668 Chenopodium quinoa HOM05D006099 ORTHO05D007317 2.2e-13 79.3 58 62.1
Hma1.2p1_1615F.1_g293710 Hydrangea macrophylla HOM05D006099 ORTHO05D007317 2.2e-13 79.3 65 53.8
Peaxi162Scf00876g00025 Petunia axillaris HOM05D006099 ORTHO05D007317 2.2e-13 79.3 62 54.8
Atru.chr7.2710 Acer truncatum HOM05D006099 ORTHO05D007317 4.8e-13 78.2 69 53.6
Oeu035175.2 Olea europaea HOM05D006099 ORTHO05D007317 8.2e-13 77.4 62 56.5
Migut.A00464 Erythranthe guttata HOM05D006099 ORTHO05D007317 1.4e-12 76.6 54 59.3
CBR_g34340 Chara braunii HOM05D006099 ORTHO05D007317 2.4e-12 75.9 69 50.7
Lsat_1_v5_gn_3_111601 Lactuca sativa HOM05D006099 ORTHO05D007317 5.9e-11 71.2 65 50.8
EL10Ac2g03669 Beta vulgaris HOM05D006099 ORTHO05D007317 7.7e-11 70.9 59 54.2
AUR62028064 Chenopodium quinoa HOM05D006099 ORTHO05D007317 1.0e-10 70.5 77 46.8
Cre07.g346100 Chlamydomonas reinhardtii HOM05D006099 ORTHO05D007317 5.0e-10 68.2 73 46.6
BcaB03g12683 Brassica carinata HOM05D006099 ORTHO05D007317 1.1e-09 67.0 57 52.6
Nitab4.5_0001327g0030 Nicotiana tabacum HOM05D006099 ORTHO05D007317 3.2e-09 65.5 64 48.4
SalBow4G2099 Salvia bowleyana HOM05D006099 ORTHO05D007317 4.2e-09 65.1 85 43.5
Hund03250 Selenicereus undatus HOM05D006099 ORTHO05D007317 3.3e-06 55.5 43 53.5
SHI14999 Sapria himalayana HOM05D005377 ORTHO05D003034 5.7e-06 54.7 43 51.2


User provided reference genes

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