Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.012G102000 Gossypium raimondii HOM05D001070 ORTHO05D010233 1.2e-32 142.5 67 100.0
Gorai.010G119900 Gossypium raimondii HOM05D001070 ORTHO05D010233 9.9e-24 112.8 63 87.3
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 1.3e-20 102.4 60 81.7
Gorai.006G095000 Gossypium raimondii HOM05D001070 ORTHO05D010233 2.3e-20 101.7 66 74.2
QL93p0141_0004 Quercus lobata HOM05D001070 ORTHO05D010233 3.3e-19 97.8 62 75.8
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 9.6e-19 96.3 62 74.2
ClCG11G009260 Citrullus lanatus HOM05D001070 ORTHO05D010233 1.4e-17 92.4 62 71.0
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 2.6e-16 88.2 59 69.5
C09p25520 Brassica napus HOM05D001070 ORTHO05D010233 7.6e-16 86.7 59 67.8
BcaC04g20701 Brassica carinata HOM05D001070 ORTHO05D002096 4.9e-15 84.0 59 66.1
Sed0027483 Sechium edule HOM05D001070 ORTHO05D010233 5.5e-14 80.5 61 65.6
GSVIVG01029582001 Vitis vinifera HOM05D001070 ORTHO05D010233 2.1e-13 78.6 53 73.6
arahy.Tifrunner.gnm1.ann1.9IC8RT Arachis hypogaea HOM05D000533 ORTHO05D002807 3.5e-13 77.8 62 56.5
Migut.D01246 Erythranthe guttata HOM05D001070 ORTHO05D010233 4.6e-13 77.4 60 71.7
Gohir.D12G091540 Gossypium hirsutum HOM05D001070 ORTHO05D010233 1.0e-12 76.3 49 81.6
Gorai.008G099100 Gossypium raimondii HOM05D001070 ORTHO05D010233 1.3e-12 75.9 49 79.6
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 1.8e-12 75.5 60 60.0
PSO210G2726 Papaver somniferum HOM05D001070 ORTHO05D010233 1.5e-11 72.4 60 56.7
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 1.5e-11 72.4 60 56.7
PSO357G0427 Papaver somniferum HOM05D001070 ORTHO05D010233 2.5e-11 71.6 60 56.7
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 9.6e-11 69.7 44 70.5
BraSC59t46531Z Brassica rapa HOM05D001070 ORTHO05D010233 9.6e-11 69.7 44 70.5
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 9.6e-11 69.7 44 75.0
Nitab4.5_0004841g0070 Nicotiana tabacum HOM05D001070 ORTHO05D022991 2.1e-10 68.6 57 64.9
BolSC47t61061H Brassica oleracea HOM05D001070 ORTHO05D010233 2.8e-10 68.2 44 68.2
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 4.8e-10 67.4 58 62.1
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 4.8e-10 67.4 58 62.1
Solyc00g500191.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 4.8e-10 67.4 58 62.1
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 4.8e-10 67.4 58 62.1
ScUNg0000260 Simmondsia chinensis HOM05D001070 ORTHO05D002096 1.4e-09 65.9 44 75.0
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 4.0e-09 64.3 52 59.6
Eucgr.I00434 Eucalyptus grandis HOM05D001070 ORTHO05D010233 9.0e-09 63.2 60 56.7
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 1.2e-08 62.8 44 72.7
C02p28780 Brassica napus HOM05D001070 ORTHO05D010233 2.6e-08 61.6 40 75.0
PSO210G1984 Papaver somniferum HOM05D001070 ORTHO05D002096 3.4e-08 61.2 54 55.6
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 4.5e-08 60.8 58 48.3
Nitab4.5_0004137g0040 Nicotiana tabacum HOM05D001070 ORTHO05D010233 5.8e-08 60.5 58 58.6
Duzib256G0005 Durio zibethinus HOM05D001070 ORTHO05D002096 1.3e-07 59.3 49 55.1
MBI08_g41351_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D010233 1.3e-07 59.3 33 75.8
Lsat_1_v5_gn_0_20081 Lactuca sativa HOM05D001070 ORTHO05D010233 6.5e-07 57.0 63 46.0
HanXRQChr15g0465401 Helianthus annuus HOM05D001070 ORTHO05D002096 1.1e-06 56.2 41 58.5
Peaxi162Scf01305g00038 Petunia axillaris HOM05D001070 ORTHO05D005132 9.3e-06 53.1 41 63.4


User provided reference genes

Program Settings