Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 0.0e+00 1259.2 631 100.0
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 0.0e+00 1249.6 631 99.4
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 0.0e+00 1246.5 631 98.9
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 0.0e+00 1159.8 631 91.3
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 0.0e+00 1146.7 631 90.0
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 0.0e+00 1145.6 631 90.5
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 0.0e+00 1098.6 631 86.7
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 1.9e-305 1052.0 631 81.5
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 6.2e-301 1036.9 628 80.4
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 8.3e-298 1026.5 675 75.9
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 2.3e-295 1018.5 631 78.4
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 3.0e-295 1018.1 627 79.3
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 5.6e-294 1013.8 629 78.9
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 7.6e-291 1003.4 627 78.9
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 5.4e-289 997.3 634 77.0
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 1.3e-287 992.6 631 76.9
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 1.1e-284 983.0 636 75.5
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 4.0e-284 981.1 634 76.5
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 1.5e-283 979.2 632 75.0
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 4.4e-283 977.6 631 76.1
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 4.9e-282 974.2 610 78.4
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 7.1e-281 970.3 632 75.8
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 9.3e-281 969.9 608 77.0
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 6.0e-280 967.2 630 74.8
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 7.8e-280 966.8 632 75.6
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 4.3e-278 961.1 631 74.3
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 9.6e-278 959.9 632 74.8
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 8.1e-277 956.8 629 73.6
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 1.1e-276 956.4 633 74.6
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.8e-276 955.7 632 75.3
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 5.3e-276 954.1 629 74.1
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 1.5e-275 952.6 638 73.2
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 7.6e-275 950.3 631 73.9
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 2.2e-274 948.7 627 74.0
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 3.8e-274 948.0 631 73.2
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 3.8e-274 948.0 627 73.4
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 2.4e-273 945.3 573 79.2
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 5.4e-273 944.1 631 73.1
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 7.1e-273 943.7 631 72.4
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 2.1e-272 942.2 631 73.4
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 2.7e-272 941.8 627 72.6
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 3.5e-272 941.4 631 73.1
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 4.6e-272 941.0 631 73.1
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 2.3e-271 938.7 627 72.1
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 3.3e-270 934.9 631 73.1
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 4.3e-270 934.5 643 71.7
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 6.9e-268 927.2 632 72.6
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 5.8e-267 924.1 627 70.5
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 7.6e-267 923.7 657 70.3
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 9.9e-267 923.3 627 70.5
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 4.9e-266 921.0 630 71.1
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 1.2e-264 916.4 637 71.4
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 3.9e-263 911.4 627 71.6
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 5.1e-263 911.0 632 70.7
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 6.7e-263 910.6 607 72.8
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 1.5e-262 909.4 608 72.7
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 3.7e-261 904.8 666 69.5
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 6.2e-261 904.0 622 70.7
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 2.0e-259 899.0 631 70.0
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 1.0e-258 896.7 596 74.2
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 1.7e-258 896.0 591 73.4
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 2.5e-257 892.1 626 69.3
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 9.3e-257 890.2 627 71.3
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 2.7e-256 888.6 622 71.5
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 3.5e-256 888.3 629 69.2
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 1.1e-254 883.2 627 68.4
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 2.8e-253 878.6 627 68.3
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 2.4e-252 875.5 628 70.9
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 6.9e-252 874.0 628 68.9
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 9.0e-252 873.6 632 68.0
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 5.0e-250 867.8 628 68.8
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 1.4e-249 866.3 586 72.4
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 8.8e-247 857.1 572 72.4
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 1.9e-246 855.9 622 69.5
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 9.1e-244 847.0 633 66.5
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 2.6e-243 845.5 638 67.1
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 1.9e-241 839.3 631 66.1
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 5.5e-241 837.8 631 66.2
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 5.5e-241 837.8 627 66.2
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 5.5e-241 837.8 623 68.7
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 7.2e-241 837.4 589 68.9
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 4.7e-240 834.7 633 66.5
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 4.7e-240 834.7 633 66.5
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 1.8e-239 832.8 630 66.2
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 5.1e-239 831.2 629 65.2
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 1.1e-238 830.1 631 66.9
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 4.4e-230 801.6 562 70.1
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 2.8e-229 798.9 632 62.8
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 1.5e-217 760.0 627 60.8
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 8.8e-215 750.7 602 61.1
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 7.8e-203 711.1 476 73.5
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 1.6e-200 703.4 455 76.5
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 9.2e-188 661.0 493 65.5
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 1.1e-185 654.1 632 52.8
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 2.5e-185 652.9 447 72.3
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 3.3e-185 652.5 398 80.2
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 3.3e-177 625.9 638 50.6
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 4.0e-175 619.0 416 71.6
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 2.5e-153 546.6 418 67.0
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 2.8e-152 543.1 597 46.7
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 2.4e-151 540.0 400 66.8
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 1.1e-148 531.2 630 46.0
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 1.3e-138 497.7 607 47.3
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 1.0e-130 471.5 417 62.8
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 2.2e-109 400.6 274 74.5
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 3.8e-109 399.8 761 33.6
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 4.3e-52 210.3 182 56.0
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 2.4e-47 194.5 174 55.7
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 3.5e-46 190.7 214 46.7
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 3.1e-42 177.6 163 58.3
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.5e-41 175.3 153 56.9
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 4.9e-32 143.7 82 84.1
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 4.3e-28 130.6 90 73.3
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 5.8e-25 120.2 221 37.6
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 8.2e-19 99.8 82 65.9
COL.COLO4_22600 Corchorus olitorius HOM05D002762 ORTHO05D155964 2.8e-11 74.7 51 76.5
TWI09G1537 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 4.8e-11 73.9 40 85.0
MD13G1179000 Malus domestica HOM05D002762 ORTHO05D030920 1.5e-09 68.9 39 79.5
Glyma.07G254400 Glycine max HOM05D002762 ORTHO05D004643 5.9e-09 67.0 47 66.0


User provided reference genes

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