Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 1.7e-190 669.5 407 100.0
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 1.7e-174 616.3 407 91.9
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 1.3e-171 606.7 407 93.1
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 4.6e-156 555.1 408 77.5
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 2.5e-154 549.3 412 76.2
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 1.9e-149 533.1 407 75.2
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 3.2e-149 532.3 407 81.1
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 5.4e-149 531.6 405 70.4
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 1.2e-148 530.4 407 70.3
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 2.1e-148 529.6 402 77.9
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 2.7e-148 529.3 407 70.0
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 7.8e-148 527.7 409 80.0
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 1.3e-147 526.9 407 73.5
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 2.3e-147 526.2 407 71.0
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 1.1e-146 523.9 407 69.3
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 8.1e-145 517.7 407 76.7
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 7.6e-143 511.1 406 70.4
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 9.9e-143 510.8 409 72.4
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 4.9e-142 508.4 411 74.7
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 3.2e-141 505.8 396 78.5
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 1.2e-140 503.8 408 76.5
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 1.2e-140 503.8 409 76.5
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 4.6e-140 501.9 409 75.6
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 6.0e-140 501.5 409 75.8
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 1.9e-138 496.5 408 75.5
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 2.5e-138 496.1 403 75.9
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 3.3e-138 495.7 402 78.1
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 3.3e-138 495.7 414 76.3
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 1.3e-137 493.8 422 65.4
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 2.1e-137 493.0 407 74.9
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 2.8e-137 492.7 410 76.1
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 2.8e-137 492.7 423 74.5
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 6.2e-137 491.5 420 75.0
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 8.1e-137 491.1 425 63.1
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 1.1e-136 490.7 423 70.7
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 1.4e-136 490.3 417 75.3
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 1.8e-136 490.0 410 75.9
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 2.4e-136 489.6 406 73.2
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 5.3e-136 488.4 419 76.1
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 9.0e-136 487.6 420 72.9
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 1.5e-135 486.9 397 73.6
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 2.6e-135 486.1 415 75.4
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 5.8e-135 485.0 388 77.6
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 7.6e-135 484.6 414 63.3
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 9.9e-135 484.2 417 79.4
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 9.9e-135 484.2 410 69.0
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 8.4e-134 481.1 426 69.5
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 8.4e-134 481.1 419 74.7
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 4.6e-132 475.3 400 71.2
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 6.0e-132 474.9 432 63.0
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 3.0e-131 472.6 385 77.4
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 1.9e-130 469.9 401 65.8
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 4.3e-130 468.8 407 72.0
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 7.4e-130 468.0 447 58.6
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 3.7e-129 465.7 431 68.9
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 4.8e-129 465.3 414 71.7
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 4.0e-128 462.2 417 73.1
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 6.9e-128 461.5 407 70.8
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 2.0e-127 459.9 410 71.7
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 4.5e-127 458.8 420 70.7
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 1.7e-126 456.8 399 60.7
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 6.5e-126 454.9 399 60.2
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 6.5e-126 454.9 390 73.3
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 1.1e-125 454.1 414 71.0
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 1.1e-125 454.1 414 71.0
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 1.1e-125 454.1 423 69.0
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 1.9e-125 453.4 408 72.3
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 7.1e-125 451.4 403 72.7
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.2e-124 450.7 412 66.0
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 1.6e-124 450.3 416 70.0
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 1.6e-124 450.3 416 70.0
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 2.1e-124 449.9 411 74.9
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.7e-124 449.5 413 66.6
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 3.5e-124 449.1 423 68.3
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 4.6e-124 448.7 412 72.1
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 1.0e-123 447.6 380 71.1
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 2.3e-123 446.4 350 80.9
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 2.3e-123 446.4 408 71.3
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 3.0e-123 446.0 415 70.6
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 1.1e-122 444.1 411 73.0
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 1.5e-122 443.7 409 73.6
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 1.9e-122 443.4 406 76.4
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 4.3e-122 442.2 399 60.9
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 5.7e-122 441.8 417 65.0
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 9.7e-122 441.0 409 73.8
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 9.7e-122 441.0 409 73.8
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 2.8e-121 439.5 397 64.7
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.7e-121 439.1 415 65.3
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 8.2e-121 438.0 413 72.9
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 5.3e-120 435.3 413 73.4
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 6.9e-120 434.9 417 73.9
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 2.0e-119 433.3 381 72.7
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 4.6e-116 422.2 393 62.8
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 6.1e-116 421.8 368 68.8
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 2.3e-115 419.9 356 63.2
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 3.9e-115 419.1 343 67.9
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 1.1e-114 417.5 343 73.5
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 1.3e-113 414.1 372 62.4
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 8.2e-113 411.4 374 61.5
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 2.4e-112 409.8 404 64.4
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 3.1e-112 409.5 313 73.5
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 1.0e-110 404.4 380 65.0
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 6.5e-110 401.7 388 60.6
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 1.9e-109 400.2 298 80.9
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 4.2e-109 399.1 416 60.1
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 1.6e-108 397.1 387 58.9
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 5.1e-107 392.1 373 68.4
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 8.8e-107 391.3 373 68.1
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 4.4e-106 389.0 346 69.7
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 1.3e-105 387.5 415 60.2
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.3e-105 387.5 415 62.4
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 5.3e-104 382.1 342 58.8
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.5e-103 379.4 388 64.7
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 7.7e-103 378.3 356 64.3
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 6.3e-97 358.6 413 52.1
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 1.2e-95 354.4 360 63.6
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 4.4e-90 335.9 375 55.2
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 3.7e-89 332.8 438 48.4
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 7.0e-88 328.6 356 53.1
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 2.0e-87 327.0 386 50.5
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 6.5e-86 322.0 170 88.2
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 8.0e-84 315.1 180 80.6
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 6.8e-83 312.0 349 48.1
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 9.1e-80 301.6 374 51.9
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 1.0e-78 298.1 329 49.8
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 3.3e-77 293.1 332 46.4
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 1.4e-72 277.7 310 48.1
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 6.8e-67 258.8 142 87.3
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 2.2e-65 253.8 293 67.9
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 2.9e-65 253.4 289 68.5
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 5.6e-61 239.2 297 58.6
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 2.3e-59 233.8 124 91.1
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 2.4e-56 223.8 283 51.6
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 1.9e-53 214.2 123 82.9
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.0e-46 191.8 255 61.2
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 1.7e-46 191.0 113 73.5
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 4.0e-43 179.9 335 36.1
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 4.4e-42 176.4 101 83.2
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 1.3e-41 174.9 169 61.5
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 1.1e-27 128.6 159 49.1
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 5.3e-27 126.3 106 67.0
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 9.9e-26 122.1 270 31.5
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 3.2e-16 90.5 113 46.0
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 4.3e-13 80.1 73 49.3


User provided reference genes

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