Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.U000501 Glycine max HOM05D005074 ORTHO05D006853 2.9e-91 338.6 173 100.0
Glyma.01G117800 Glycine max HOM05D005074 ORTHO05D006853 1.7e-80 302.8 171 89.5
Phvul.010G073200 Phaseolus vulgaris HOM05D005074 ORTHO05D006853 9.9e-68 260.4 171 79.5
VMungo0331G1905 Vigna mungo HOM05D005074 ORTHO05D006853 9.9e-68 260.4 171 79.5
Lj5g0028092 Lotus japonicus HOM05D005074 ORTHO05D006853 2.5e-63 245.7 171 74.9
Ca_13410_v3 Cicer arietinum L. HOM05D005074 ORTHO05D006853 3.8e-59 231.9 171 70.8
Ca_13419_v3 Cicer arietinum L. HOM05D005074 ORTHO05D006853 3.8e-59 231.9 171 70.8
Lalb_Chr07g0191391 Lupinus albus HOM05D005074 ORTHO05D006853 1.4e-58 229.9 171 70.8
TPR.G34365 Trifolium pratense HOM05D005074 ORTHO05D006853 1.9e-58 229.6 171 70.2
Medtr1g024820 Medicago truncatula HOM05D005074 ORTHO05D006853 7.1e-58 227.6 171 69.0
Psat6g003720 Pisum sativum HOM05D005074 ORTHO05D006853 1.8e-56 223.0 169 68.6
arahy.Tifrunner.gnm1.ann1.N71AR0 Arachis hypogaea HOM05D005074 ORTHO05D006853 5.0e-51 204.9 171 67.3
Haze_21033 Corylus avellana HOM05D005074 ORTHO05D006853 5.9e-44 181.4 173 61.8
TWI74G0571 Tripterygium wilfordii HOM05D005074 ORTHO05D006853 5.9e-44 181.4 173 61.3
Cfa017171 Carpinus fangiana HOM05D005074 ORTHO05D006853 1.7e-43 179.9 173 61.3
QL08p015889 Quercus lobata HOM05D005074 ORTHO05D006853 2.5e-42 176.0 172 58.7
Manes.09G106200 Manihot esculenta HOM05D005074 ORTHO05D006853 5.5e-42 174.9 172 57.0
Prupe.6G280900 Prunus persica HOM05D005074 ORTHO05D006853 9.4e-42 174.1 172 57.6
Potri.016G120200 Populus trichocarpa HOM05D005074 ORTHO05D006853 3.6e-41 172.2 172 56.4
GSVIVG01003941001 Vitis vinifera HOM05D005074 ORTHO05D006853 6.1e-41 171.4 153 62.1
Ciclev10011130m.g Citrus clementina HOM05D005074 ORTHO05D006853 1.0e-40 170.6 172 53.5
CiPaw.10G158300 Carya illinoinensis HOM05D005074 ORTHO05D006853 2.3e-40 169.5 173 60.1
Sabra16G0116100 Salix brachista HOM05D005074 ORTHO05D006853 3.9e-40 168.7 172 55.8
Atru.chr8.2282 Acer truncatum HOM05D005074 ORTHO05D006853 6.7e-40 167.9 172 55.8
CSS0046053 Camellia sinensis var. sinensis HOM05D005074 ORTHO05D006853 8.8e-40 167.5 172 56.4
CSS0047541 Camellia sinensis var. sinensis HOM05D005074 ORTHO05D006853 2.5e-39 166.0 172 55.8
MD04G1160300 Malus domestica HOM05D005074 ORTHO05D006853 5.7e-39 164.9 175 54.9
FvH4_6g11090 Fragaria vesca HOM05D005074 ORTHO05D006853 1.3e-38 163.7 172 56.4
RcHm_v2.0_Chr3g0462521 Rosa chinensis HOM05D005074 ORTHO05D006853 1.7e-38 163.3 171 53.8
FAN14G3962 Fragaria x ananassa HOM05D005074 ORTHO05D006853 2.8e-38 162.5 172 55.8
MELO3C009144.2 Cucumis melo HOM05D005074 ORTHO05D006853 6.3e-38 161.4 173 56.1
CsaV3_3G033540 Cucumis sativus L. HOM05D005074 ORTHO05D006853 8.2e-38 161.0 171 55.6
Actinidia29087 Actinidia chinensis HOM05D005074 ORTHO05D006853 1.8e-37 159.8 172 55.2
TAR633G0154 Trochodendron aralioides HOM05D005074 ORTHO05D006853 3.1e-37 159.1 172 52.9
ClCG10G022350 Citrullus lanatus HOM05D005074 ORTHO05D006853 4.1e-37 158.7 173 53.8
FAN02G3586 Fragaria x ananassa HOM05D005074 ORTHO05D006853 5.3e-37 158.3 174 55.2
Dinv13134 Davidia involucrata HOM05D005074 ORTHO05D006853 6.9e-37 157.9 171 57.3
Thecc.05G011500 Theobroma cacao HOM05D005074 ORTHO05D006853 1.2e-36 157.1 171 52.6
CANSAT35G1267 Cannabis sativa HOM05D005074 ORTHO05D006853 1.5e-36 156.8 171 52.0
FAN05G5223 Fragaria x ananassa HOM05D005074 ORTHO05D006853 2.0e-36 156.4 172 54.7
Sed0022379 Sechium edule HOM05D005074 ORTHO05D006853 3.4e-36 155.6 173 52.6
Cc06_g01060 Coffea canephora HOM05D005074 ORTHO05D006853 7.7e-36 154.5 174 52.9
EL10Ac5g12524 Beta vulgaris HOM05D005074 ORTHO05D006853 1.0e-35 154.1 179 50.3
Hma1.2p1_0501F.1_g167650 Hydrangea macrophylla HOM05D005074 ORTHO05D006853 1.3e-35 153.7 175 54.3
FAN09G0802 Fragaria x ananassa HOM05D005074 ORTHO05D006853 1.7e-35 153.3 171 52.0
Duzib128G0037 Durio zibethinus HOM05D005074 ORTHO05D006853 2.2e-35 152.9 156 54.5
MBI03_g18944_MAGBIO Magnolia biondii HOM05D005074 ORTHO05D006853 5.0e-35 151.8 172 50.0
COL.COLO4_14500 Corchorus olitorius HOM05D005074 ORTHO05D006853 8.5e-35 151.0 137 56.9
vmacro20302 Vaccinium macrocarpon HOM05D005074 ORTHO05D006853 1.1e-34 150.6 172 53.5
PSO384G2802 Papaver somniferum HOM05D005074 ORTHO05D006853 1.4e-34 150.2 172 48.8
Hund10968 Selenicereus undatus HOM05D005074 ORTHO05D006853 1.4e-34 150.2 177 52.0
Hma1.2p1_0501F.1_g167660 Hydrangea macrophylla HOM05D005074 ORTHO05D006853 1.9e-34 149.8 130 64.6
Nn2g10923 Nelumbo nucifera HOM05D005074 ORTHO05D006853 2.5e-34 149.4 175 50.3
AUR62030501 Chenopodium quinoa HOM05D005074 ORTHO05D006853 5.5e-34 148.3 176 48.9
AUR62030792 Chenopodium quinoa HOM05D005074 ORTHO05D006853 5.5e-34 148.3 176 49.4
PSO339G4313 Papaver somniferum HOM05D005074 ORTHO05D006853 1.6e-33 146.7 173 49.1
PGR031G0257 Punica granatum HOM05D005074 ORTHO05D006853 2.1e-33 146.4 171 52.6
Aqoxy4G02460 Aquilegia oxysepala HOM05D005074 ORTHO05D006853 2.7e-33 146.0 173 49.7
Rhsim05G0219800 Rhododendron simsii HOM05D005074 ORTHO05D006853 7.9e-33 144.4 180 50.6
Gohir.A04G093700 Gossypium hirsutum HOM05D005074 ORTHO05D006853 1.4e-32 143.7 171 50.3
Gorai.012G116900 Gossypium raimondii HOM05D005074 ORTHO05D006853 1.8e-32 143.3 147 55.1
Nitab4.5_0000195g0210 Nicotiana tabacum HOM05D005074 ORTHO05D006853 2.3e-32 142.9 171 50.3
Gohir.D04G133000 Gossypium hirsutum HOM05D005074 ORTHO05D006853 3.0e-32 142.5 171 49.7
CAN.G41.5 Capsicum annuum HOM05D005074 ORTHO05D006853 3.9e-32 142.1 125 60.0
Medtr1g024155 Medicago truncatula HOM05D005074 ORTHO05D006853 3.9e-32 142.1 133 60.9
unitig_27.g24848 Utricularia gibba HOM05D005074 ORTHO05D006853 5.1e-32 141.7 102 69.6
Lj2C71T3 Lonicera japonica HOM05D005074 ORTHO05D006853 6.7e-32 141.4 172 52.3
Ah.02g115540 Amaranthus hybridus HOM05D005074 ORTHO05D006853 8.8e-32 141.0 177 46.3
Nitab4.5_0012964g0020 Nicotiana tabacum HOM05D005074 ORTHO05D006853 1.5e-31 140.2 171 49.7
Solyc09g005100.4 Solanum lycopersicum HOM05D005074 ORTHO05D006853 1.5e-31 140.2 171 49.7
Sopen09g001080 Solanum pennellii HOM05D005074 ORTHO05D006853 1.5e-31 140.2 171 49.7
DCAR_006624 Daucus carota HOM05D005074 ORTHO05D006853 2.0e-31 139.8 99 67.7
Peaxi162Scf01132g00134 Petunia axillaris HOM05D005074 ORTHO05D006853 2.0e-31 139.8 105 66.7
HanXRQChr12g0383191 Helianthus annuus HOM05D005074 ORTHO05D006853 2.6e-31 139.4 99 71.7
Carub.0006s0050 Capsella rubella HOM05D005074 ORTHO05D006853 3.3e-31 139.0 126 58.7
Migut.J00131 Erythranthe guttata HOM05D005074 ORTHO05D006853 3.3e-31 139.0 120 60.8
CARHR211670 Cardamine hirsuta HOM05D005074 ORTHO05D006853 7.4e-31 137.9 154 52.6
Aa31LG1G22940 Aethionema arabicum HOM05D005074 ORTHO05D006853 9.7e-31 137.5 159 50.3
PGSC0003DMG400006257 Solanum tuberosum HOM05D005074 ORTHO05D006853 9.7e-31 137.5 151 50.3
Eucgr.A00552 Eucalyptus grandis HOM05D005074 ORTHO05D006853 1.3e-30 137.1 171 46.2
CDE08G0259 Ceratophyllum demersum HOM05D005074 ORTHO05D006853 1.7e-30 136.7 171 48.0
Sc22g0002590 Simmondsia chinensis HOM05D005074 ORTHO05D006853 2.2e-30 136.3 159 51.6
THA.LOC104816650 Tarenaya hassleriana HOM05D005074 ORTHO05D006853 4.8e-30 135.2 134 57.5
AL6G10830 Arabidopsis lyrata HOM05D005074 ORTHO05D006853 1.4e-29 133.7 107 66.4
AT5G01310 Arabidopsis thaliana HOM05D005074 ORTHO05D006853 3.1e-29 132.5 130 55.4
Aa31LG1G22950 Aethionema arabicum HOM05D005074 ORTHO05D006853 4.1e-29 132.1 100 66.0
A10p33710 Brassica napus HOM05D005074 ORTHO05D006853 5.3e-29 131.7 97 67.0
C09p74610 Brassica napus HOM05D005074 ORTHO05D006853 5.3e-29 131.7 97 67.0
BolC9t60195H Brassica oleracea HOM05D005074 ORTHO05D006853 5.3e-29 131.7 97 67.0
Sp6g40630 Schrenkiella parvula HOM05D005074 ORTHO05D006853 1.2e-28 130.6 177 46.9
BraA10t45403Z Brassica rapa HOM05D005074 ORTHO05D006853 2.6e-28 129.4 97 66.0
Thhalv10012562m.g Eutrema salsugineum HOM05D005074 ORTHO05D006853 3.5e-28 129.0 107 64.5
Aa31LG1G22960 Aethionema arabicum HOM05D005074 ORTHO05D006853 1.3e-27 127.1 101 61.4
MSTRG.18991 Avicennia marina HOM05D005074 ORTHO05D006853 2.2e-27 126.3 174 46.0
Zm00001eb013510 Zea mays HOM05D005074 ORTHO05D006853 3.8e-27 125.6 95 62.1
SGA_v2.0_scaffold85G26714 Striga asiatica HOM05D005074 ORTHO05D006853 6.5e-27 124.8 101 62.4
FAN09G0145 Fragaria x ananassa HOM05D005074 ORTHO05D006853 1.1e-26 124.0 153 52.3
SalBow5G0276 Salvia bowleyana HOM05D005074 ORTHO05D006853 2.5e-26 122.9 174 45.4
SHI12858 Sapria himalayana HOM05D005074 ORTHO05D006853 2.5e-26 122.9 172 44.2
FAN09G1779 Fragaria x ananassa HOM05D005074 ORTHO05D006853 5.5e-26 121.7 153 51.6
SalBow5G3519 Salvia bowleyana HOM05D005074 ORTHO05D006853 5.5e-26 121.7 174 45.4
ATR0716G066 Amborella trichopoda HOM05D005074 ORTHO05D006853 3.6e-25 119.0 99 61.6
Aa31LG8G1910 Aethionema arabicum HOM05D005074 ORTHO05D006853 8.0e-25 117.9 101 58.4
HPP92_025102 Vanilla planifolia HOM05D005074 ORTHO05D006853 8.8e-24 114.4 150 42.7
FAN09G4669 Fragaria x ananassa HOM05D005074 ORTHO05D006853 8.2e-22 107.8 143 46.2
SMO119G0484 Selaginella moellendorffii HOM05D005074 ORTHO05D006853 2.0e-20 103.2 126 46.8
AagrBONN_evm.TU.Sc2ySwM_362.194 Anthoceros agrestis HOM05D005074 ORTHO05D006853 2.9e-19 99.4 121 47.1
Lsat_1_v5_gn_8_100780 Lactuca sativa HOM05D005074 ORTHO05D006853 2.9e-19 99.4 144 47.2
Mapoly0120s0055 Marchantia polymorpha HOM05D005074 ORTHO05D006853 2.9e-19 99.4 118 47.5
BcaC06g31973 Brassica carinata HOM05D005074 ORTHO05D006853 2.5e-18 96.3 136 41.9
Pp3c11_18160 Physcomitrium patens HOM05D005074 ORTHO05D006853 3.2e-18 95.9 97 51.5
ECA236G3605 Erigeron canadensis HOM05D005074 ORTHO05D006853 2.1e-17 93.2 110 53.6
Rhsim05G0219600 Rhododendron simsii HOM05D005074 ORTHO05D006853 2.1e-17 93.2 104 51.0
RcHm_v2.0_Chr3g0462501 Rosa chinensis HOM05D005074 ORTHO05D006853 3.4e-15 85.9 86 55.8
MD12G1172800 Malus domestica HOM05D005074 ORTHO05D006853 5.9e-12 75.1 126 41.3
Oeu033574.2 Olea europaea HOM05D005074 ORTHO05D006853 1.6e-09 67.0 156 38.5
Actinidia11567 Actinidia chinensis HOM05D005074 ORTHO05D006853 4.0e-08 62.4 81 50.6
Psat0s659g0040 Pisum sativum HOM05D005021 ORTHO05D023083 1.2e-07 60.8 47 66.0
CBR_g45475 Chara braunii HOM05D005074 ORTHO05D006853 4.4e-07 58.9 170 27.1
Psat0s5010g0040 Pisum sativum HOM05D005021 ORTHO05D004273 9.8e-07 57.8 97 41.2
Psat2g014320 Pisum sativum HOM05D005021 ORTHO05D023083 1.3e-06 57.4 47 63.8
Psat0s2371g0040 Pisum sativum HOM05D000434 ORTHO05D006824 2.2e-06 56.6 38 71.1
Psat1g136920 Pisum sativum HOM05D005021 ORTHO05D023083 3.7e-06 55.8 47 61.7


User provided reference genes

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