Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.20G073500 Glycine max HOM05D004511 ORTHO05D005348 2.1e-266 921.8 449 100.0
Glyma.10G130700 Glycine max HOM05D004511 ORTHO05D005348 7.9e-234 813.5 448 87.7
Phvul.007G232900 Phaseolus vulgaris HOM05D004511 ORTHO05D005348 4.3e-224 781.2 449 84.9
Lj6g0021678 Lotus japonicus HOM05D004511 ORTHO05D005348 3.9e-217 758.1 449 82.9
Medtr1g045670 Medicago truncatula HOM05D004511 ORTHO05D005348 2.9e-204 715.3 451 78.3
arahy.Tifrunner.gnm1.ann1.QET6JI Arachis hypogaea HOM05D004511 ORTHO05D005348 4.7e-202 708.0 448 77.0
arahy.Tifrunner.gnm1.ann1.Z900IQ Arachis hypogaea HOM05D004511 ORTHO05D005348 8.0e-202 707.2 448 77.0
Psat6g108520 Pisum sativum HOM05D004511 ORTHO05D005348 1.0e-201 706.8 451 77.6
CiPaw.01G177000 Carya illinoinensis HOM05D004511 ORTHO05D005348 2.2e-196 689.1 452 75.0
Lalb_Chr02g0150721 Lupinus albus HOM05D004511 ORTHO05D005348 2.5e-195 685.6 445 76.2
QL06p021350 Quercus lobata HOM05D004511 ORTHO05D005348 5.5e-195 684.5 448 75.0
Prupe.1G050200 Prunus persica HOM05D004511 ORTHO05D005348 5.2e-193 677.9 448 74.6
MD13G1223200 Malus domestica HOM05D004511 ORTHO05D005348 2.0e-192 676.0 448 73.9
Thecc.04G266800 Theobroma cacao HOM05D004511 ORTHO05D005348 1.3e-191 673.3 448 73.7
CANSAT78G2334 Cannabis sativa HOM05D004511 ORTHO05D005348 8.3e-191 670.6 451 73.2
FvH4_4g05000 Fragaria vesca HOM05D004511 ORTHO05D005348 7.0e-190 667.5 448 73.4
FAN12G0867 Fragaria x ananassa HOM05D004511 ORTHO05D005348 5.9e-189 664.5 448 73.2
Dinv29796 Davidia involucrata HOM05D004511 ORTHO05D005348 2.3e-188 662.5 445 73.0
RcHm_v2.0_Chr4g0395811 Rosa chinensis HOM05D004511 ORTHO05D005348 3.3e-187 658.7 457 72.0
Duzib151G0197 Durio zibethinus HOM05D004511 ORTHO05D005348 3.6e-186 655.2 448 71.9
ClCG05G003940 Citrullus lanatus HOM05D004511 ORTHO05D005348 8.0e-186 654.1 449 72.6
TAR365G1143 Trochodendron aralioides HOM05D004511 ORTHO05D005348 2.3e-185 652.5 448 71.9
Potri.010G065000 Populus trichocarpa HOM05D004511 ORTHO05D005348 2.0e-184 649.4 452 71.2
Ciclev10004190m.g Citrus clementina HOM05D004511 ORTHO05D005348 2.6e-184 649.0 448 70.5
Gorai.006G254800 Gossypium raimondii HOM05D004511 ORTHO05D005348 1.7e-183 646.4 448 71.9
THA.LOC104821629 Tarenaya hassleriana HOM05D004511 ORTHO05D005348 2.2e-183 646.0 448 69.9
GSVIVG01027931001 Vitis vinifera HOM05D004511 ORTHO05D005348 3.7e-183 645.2 448 71.2
TWI73G0808 Tripterygium wilfordii HOM05D004511 ORTHO05D005348 4.9e-183 644.8 448 71.2
Sed0014740 Sechium edule HOM05D004511 ORTHO05D005348 8.3e-183 644.0 449 70.8
Gohir.D09G232000 Gossypium hirsutum HOM05D004511 ORTHO05D005348 1.4e-182 643.3 448 71.7
PGR004G0717 Punica granatum HOM05D004511 ORTHO05D005348 4.1e-182 641.7 448 70.8
Gohir.A09G230900 Gossypium hirsutum HOM05D004511 ORTHO05D005348 7.0e-182 641.0 448 71.4
CsaV3_3G011610 Cucumis sativus L. HOM05D004511 ORTHO05D005348 5.9e-181 637.9 448 70.5
Sp3g22130 Schrenkiella parvula HOM05D004511 ORTHO05D005348 7.8e-181 637.5 448 68.8
Aqoxy5G00136 Aquilegia oxysepala HOM05D004511 ORTHO05D005348 5.6e-179 631.3 448 67.9
COL.COLO4_15984 Corchorus olitorius HOM05D004511 ORTHO05D005348 5.6e-179 631.3 494 65.8
Thhalv10002376m.g Eutrema salsugineum HOM05D004511 ORTHO05D005348 9.5e-179 630.6 450 68.4
A07p07990 Brassica napus HOM05D004511 ORTHO05D005348 1.6e-178 629.8 456 68.0
BraA07t28586Z Brassica rapa HOM05D004511 ORTHO05D005348 1.6e-178 629.8 456 68.0
CARHR100420 Cardamine hirsuta HOM05D004511 ORTHO05D005348 1.6e-178 629.8 449 69.0
BcaC06g35683 Brassica carinata HOM05D004511 ORTHO05D005348 2.1e-178 629.4 449 68.8
C07p12050 Brassica napus HOM05D004511 ORTHO05D005348 2.1e-178 629.4 449 68.8
BolC7t41673H Brassica oleracea HOM05D004511 ORTHO05D005348 6.1e-178 627.9 449 68.6
BcaB06g26614 Brassica carinata HOM05D004511 ORTHO05D005348 8.0e-178 627.5 450 68.7
Carub.0003s2466 Capsella rubella HOM05D004511 ORTHO05D005348 4.0e-177 625.2 449 68.4
Migut.G00563 Erythranthe guttata HOM05D004511 ORTHO05D005348 5.2e-177 624.8 457 65.9
Sc11g0002730 Simmondsia chinensis HOM05D004511 ORTHO05D005348 6.8e-177 624.4 445 69.0
AT3G24320 Arabidopsis thaliana HOM05D004511 ORTHO05D005348 7.5e-176 620.9 449 67.7
MSTRG.9851 Avicennia marina HOM05D004511 ORTHO05D005348 7.5e-176 620.9 449 67.9
SGA_v2.0_scaffold67G22677 Striga asiatica HOM05D004511 ORTHO05D005348 1.3e-175 620.2 448 67.2
ECA248G2418 Erigeron canadensis HOM05D004511 ORTHO05D005348 2.9e-175 619.0 445 66.5
Nn1g02989 Nelumbo nucifera HOM05D004511 ORTHO05D005348 1.1e-174 617.1 451 67.4
Aa31LG8G11050 Aethionema arabicum HOM05D004511 ORTHO05D005348 2.4e-174 615.9 448 67.0
Ah.01g020260 Amaranthus hybridus HOM05D004511 ORTHO05D005348 9.2e-174 614.0 452 66.8
Actinidia27093 Actinidia chinensis HOM05D004511 ORTHO05D005348 7.8e-173 610.9 445 68.3
Cc03_g06420 Coffea canephora HOM05D004511 ORTHO05D005348 3.0e-172 609.0 419 70.9
Nitab4.5_0001041g0180 Nicotiana tabacum HOM05D004511 ORTHO05D005348 3.0e-172 609.0 449 67.0
Nitab4.5_0005154g0040 Nicotiana tabacum HOM05D004511 ORTHO05D005348 3.3e-171 605.5 450 66.2
PSO210G5810 Papaver somniferum HOM05D004511 ORTHO05D005348 2.3e-169 599.4 448 65.0
AUR62011461 Chenopodium quinoa HOM05D004511 ORTHO05D005348 2.0e-168 596.3 452 66.2
MELO3C006369.2 Cucumis melo HOM05D004511 ORTHO05D005348 3.4e-168 595.5 365 77.0
HanXRQChr01g0023051 Helianthus annuus HOM05D004511 ORTHO05D005348 5.8e-168 594.7 449 64.6
PSO170G1037 Papaver somniferum HOM05D004511 ORTHO05D005348 9.8e-168 594.0 442 64.7
Solyc09g090870.3 Solanum lycopersicum HOM05D004511 ORTHO05D005348 9.8e-168 594.0 452 65.3
Sopen09g033830 Solanum pennellii HOM05D004511 ORTHO05D005348 6.4e-167 591.3 452 65.0
Zm00001eb426210 Zea mays HOM05D004511 ORTHO05D005348 6.4e-167 591.3 396 69.9
EL10Ac9g21855 Beta vulgaris HOM05D004511 ORTHO05D005348 8.3e-167 590.9 490 61.6
DCAR_027355 Daucus carota HOM05D004511 ORTHO05D005348 7.0e-166 587.8 358 77.9
Os04g0507000 Oryza sativa ssp. japonica HOM05D004511 ORTHO05D005348 7.8e-165 584.3 449 64.1
HanXRQChr06g0182821 Helianthus annuus HOM05D004511 ORTHO05D005348 6.6e-164 581.3 434 65.0
AUR62016594 Chenopodium quinoa HOM05D004511 ORTHO05D005348 9.9e-160 567.4 452 63.7
AL3G39770 Arabidopsis lyrata HOM05D004511 ORTHO05D005348 1.3e-159 567.0 459 62.5
ATR0787G210 Amborella trichopoda HOM05D004511 ORTHO05D005348 1.4e-158 563.5 448 60.3
HPP92_015182 Vanilla planifolia HOM05D004511 ORTHO05D005348 7.8e-157 557.8 386 69.7
unitig_747.g21671 Utricularia gibba HOM05D004511 ORTHO05D005348 1.6e-154 550.1 394 67.0
Atru.chr4.1900 Acer truncatum HOM05D004511 ORTHO05D005348 1.4e-153 547.0 317 80.8
Eucgr.H02905 Eucalyptus grandis HOM05D004511 ORTHO05D005348 2.4e-153 546.2 333 78.4
Peaxi162Scf00531g00610 Petunia axillaris HOM05D004511 ORTHO05D005348 5.2e-153 545.0 396 67.4
SEGI_11740 Sequoiadendron giganteum HOM05D004511 ORTHO05D005348 2.5e-147 526.2 389 64.5
Oeu061869.1 Olea europaea HOM05D004511 ORTHO05D005348 7.3e-147 524.6 317 77.0
Ca_11884_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 9.6e-147 524.2 356 73.9
Lsat_1_v5_gn_2_41221 Lactuca sativa HOM05D004511 ORTHO05D005348 1.8e-145 520.0 327 74.6
TPR.G23996 Trifolium pratense HOM05D004511 ORTHO05D005348 2.0e-144 516.5 409 64.1
Rhsim04G0171100 Rhododendron simsii HOM05D004511 ORTHO05D005348 2.9e-143 512.7 510 55.5
Mapoly0067s0046 Marchantia polymorpha HOM05D004511 ORTHO05D005348 1.1e-134 484.2 369 59.1
Ca_07387_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 4.0e-129 465.7 381 64.8
FAN17G0167 Fragaria x ananassa HOM05D004511 ORTHO05D005348 7.6e-128 461.5 448 56.5
Lj6A637T63 Lonicera japonica HOM05D004511 ORTHO05D005348 3.2e-118 429.5 270 76.3
Pp3c8_22090 Physcomitrium patens HOM05D004511 ORTHO05D005348 4.6e-117 425.6 396 52.0
SMO364G0324 Selaginella moellendorffii HOM05D004511 ORTHO05D005348 1.3e-116 424.1 347 58.5
Pp3c23_17640 Physcomitrium patens HOM05D004511 ORTHO05D005348 1.0e-111 407.9 367 52.0
vmacro08562 Vaccinium macrocarpon HOM05D004511 ORTHO05D005348 8.5e-111 404.8 245 77.6
Ca_26419_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 8.2e-106 388.3 353 59.2
AL2G22890 Arabidopsis lyrata HOM05D004511 ORTHO05D005348 6.9e-105 385.2 291 65.6
VMungo0720G1651 Vigna mungo HOM05D004511 ORTHO05D005348 3.2e-102 376.3 225 82.2
CSS0015875 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 2.1e-101 373.6 231 75.8
Hund00489 Selenicereus undatus HOM05D004511 ORTHO05D005348 9.4e-94 348.2 241 68.5
CAN.G524.10 Capsicum annuum HOM05D004511 ORTHO05D005348 4.7e-93 345.9 223 73.5
CSS0022858 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 4.4e-91 339.3 208 76.0
Manes.03G157900 Manihot esculenta HOM05D004511 ORTHO05D005348 3.8e-87 326.2 199 78.9
SHI00812 Sapria himalayana HOM05D004511 ORTHO05D005348 3.0e-84 316.6 246 64.2
CDE08G1197 Ceratophyllum demersum HOM05D004511 ORTHO05D005348 6.3e-82 308.9 238 63.4
Hund00476 Selenicereus undatus HOM05D004511 ORTHO05D005348 2.2e-79 300.4 199 71.4
FAN22G0933 Fragaria x ananassa HOM05D004511 ORTHO05D005348 1.8e-76 290.8 240 62.5
Hund00475 Selenicereus undatus HOM05D004511 ORTHO05D005348 8.0e-61 238.8 204 62.7
VMungo0720G0419 Vigna mungo HOM05D004511 ORTHO05D005348 1.7e-55 221.1 181 63.0
Haze_11474 Corylus avellana HOM05D004511 ORTHO05D005348 2.5e-54 217.2 144 70.8
Glyma.10G121578 Glycine max HOM05D004511 ORTHO05D005348 8.9e-52 208.8 115 85.2
Glyma.10G121584 Glycine max HOM05D004511 ORTHO05D005348 2.2e-50 204.1 113 84.1
Glyma.10G121600 Glycine max HOM05D004511 ORTHO05D005348 8.3e-50 202.2 113 84.1
Glyma.10G121560 Glycine max HOM05D004511 ORTHO05D005348 2.7e-48 197.2 130 74.6
PRCOL_00002937 Prasinoderma coloniale HOM05D004511 ORTHO05D005348 1.7e-47 194.5 339 34.8
CBR_g22304 Chara braunii HOM05D000019 ORTHO05D000002 2.5e-46 190.7 204 44.6
SHI00817 Sapria himalayana HOM05D004511 ORTHO05D005348 2.8e-45 187.2 121 73.6
MCO07G727 Micromonas commoda HOM05D004511 ORTHO05D005348 1.9e-41 174.5 420 31.9
SEGI_26830 Sequoiadendron giganteum HOM05D004511 ORTHO05D005348 7.1e-41 172.6 128 61.7
vmacro08561 Vaccinium macrocarpon HOM05D004511 ORTHO05D005348 1.8e-36 157.9 82 87.8
Sopen09g033860 Solanum pennellii HOM05D004511 ORTHO05D005348 1.3e-29 135.2 104 67.3
CSS0045058 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 3.6e-29 133.7 78 80.8
CSS0023992 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 1.1e-28 132.1 78 79.5
Ca_30594_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 7.6e-27 125.9 72 83.3
Atru.chr4.2015 Acer truncatum HOM05D004511 ORTHO05D005348 4.6e-24 116.7 223 36.3
Solyc09g090890.3 Solanum lycopersicum HOM05D004511 ORTHO05D005348 3.9e-23 113.6 98 61.2
Lj6A637T62 Lonicera japonica HOM05D004511 ORTHO05D005348 1.3e-21 108.6 56 87.5
TPR.G7054 Trifolium pratense HOM05D004511 ORTHO05D005348 2.1e-21 107.8 60 81.7
CSS0010114 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 5.8e-19 99.8 122 45.9
CSS0021105 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 9.3e-17 92.4 97 51.5
Ca_21499_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 1.6e-13 81.6 105 45.7
Cpa.g.c32688 Carica papaya HOM05D004511 ORTHO05D005348 9.0e-12 75.9 40 80.0
Lsat_1_v5_gn_1_68561 Lactuca sativa HOM05D004511 ORTHO05D005348 1.2e-11 75.5 86 50.0
CDE08G1007 Ceratophyllum demersum HOM05D004511 ORTHO05D005348 1.5e-11 75.1 40 80.0
Cre06.g250850 Chlamydomonas reinhardtii HOM05D004511 ORTHO05D005348 2.2e-10 71.2 193 32.1
ATR0787G159 Amborella trichopoda HOM05D004511 ORTHO05D005348 3.9e-07 60.5 39 64.1
Mapoly0042s0086 Marchantia polymorpha HOM05D001061 ORTHO05D006808 5.1e-07 60.1 99 37.4
Phvul.001G212500 Phaseolus vulgaris HOM05D001061 ORTHO05D006808 1.1e-06 58.9 164 27.4
VMungo1383G2073 Vigna mungo HOM05D001061 ORTHO05D006808 5.7e-06 56.6 103 34.0
Lalb_Chr18g0049161 Lupinus albus HOM05D001061 ORTHO05D006808 7.4e-06 56.2 99 33.3
CDE02G2952 Ceratophyllum demersum HOM05D001061 ORTHO05D006808 9.6e-06 55.8 99 33.3


User provided reference genes

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