Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G168300 Glycine max HOM05D007706 ORTHO05D009593 2.0e-155 552.7 355 100.0
Glyma.03G167200 Glycine max HOM05D007706 ORTHO05D009593 2.5e-126 456.1 263 90.1
VMungo1383G0992 Vigna mungo HOM05D007706 ORTHO05D009593 1.2e-112 410.6 368 81.0
Phvul.001G164700 Phaseolus vulgaris HOM05D007706 ORTHO05D009593 2.0e-107 393.3 369 71.3
Lj1g0013336 Lotus japonicus HOM05D007706 ORTHO05D009593 4.2e-81 305.8 281 60.1
Ca_08742_v3 Cicer arietinum L. HOM05D007706 ORTHO05D009593 1.3e-77 294.3 275 60.7
arahy.Tifrunner.gnm1.ann1.NJ5037 Arachis hypogaea HOM05D007706 ORTHO05D009593 1.3e-74 284.3 374 65.5
Ca_08762_v3 Cicer arietinum L. HOM05D003225 ORTHO05D009593 3.8e-74 282.7 339 67.6
TPR.G20053 Trifolium pratense HOM05D007706 ORTHO05D009593 4.7e-72 275.8 276 61.6
arahy.Tifrunner.gnm1.ann1.S77KHM Arachis hypogaea HOM05D007706 ORTHO05D009593 1.8e-71 273.9 373 66.2
Ca_30216_v3 Cicer arietinum L. HOM05D003225 ORTHO05D003818 5.2e-71 272.3 330 67.0
Psat3g053960 Pisum sativum HOM05D007706 ORTHO05D009593 2.8e-69 266.5 273 63.4
Psat3g051920 Pisum sativum HOM05D007706 ORTHO05D009593 4.1e-68 262.7 274 57.3
TPR.G30860 Trifolium pratense HOM05D003225 ORTHO05D003818 2.5e-65 253.4 281 55.9
Medtr7g098450 Medicago truncatula HOM05D007706 ORTHO05D009593 4.7e-64 249.2 274 57.3
Lalb_Chr20g0113631 Lupinus albus HOM05D007706 ORTHO05D009593 2.0e-59 233.8 281 52.7
Medtr7g099260 Medicago truncatula HOM05D007706 ORTHO05D009593 1.0e-58 231.5 276 54.7
Duzib138G1124 Durio zibethinus HOM05D007706 ORTHO05D009593 2.6e-46 190.3 299 43.5
CiPaw.04G190500 Carya illinoinensis HOM05D007706 ORTHO05D009593 1.1e-44 184.9 288 42.4
Cfa002482 Carpinus fangiana HOM05D007706 ORTHO05D009593 1.4e-44 184.5 285 43.5
Thecc.01G250700 Theobroma cacao HOM05D007706 ORTHO05D009593 1.9e-44 184.1 305 40.3
Haze_24704 Corylus avellana HOM05D007706 ORTHO05D009593 4.1e-44 183.0 291 43.6
QL09p041349 Quercus lobata HOM05D007706 ORTHO05D009593 2.5e-41 173.7 284 43.3
Sabra02G0195300 Salix brachista HOM05D007706 ORTHO05D009593 3.3e-41 173.3 289 41.9
Potri.002G256900 Populus trichocarpa HOM05D007706 ORTHO05D009593 1.2e-40 171.4 290 43.4
Duzib133G1528 Durio zibethinus HOM05D007706 ORTHO05D009593 1.1e-39 168.3 292 39.4
Gohir.D07G210400 Gossypium hirsutum HOM05D007706 ORTHO05D009593 4.9e-37 159.5 307 40.7
PGR031G0475 Punica granatum HOM05D007706 ORTHO05D009593 1.4e-36 157.9 274 43.8
Gorai.001G237800 Gossypium raimondii HOM05D007706 ORTHO05D009593 2.1e-35 154.1 305 40.3
Gohir.A07G204400 Gossypium hirsutum HOM05D007706 ORTHO05D009593 2.7e-35 153.7 301 40.2
PGSC0003DMG400008584 Solanum tuberosum HOM05D007706 ORTHO05D009593 2.3e-34 150.6 281 39.9
Sopen09g025790 Solanum pennellii HOM05D007706 ORTHO05D009593 2.5e-33 147.1 281 38.4
CSS0048547 Camellia sinensis var. sinensis HOM05D007706 ORTHO05D009593 3.3e-33 146.7 297 39.4
Dinv16399 Davidia involucrata HOM05D007706 ORTHO05D009593 3.3e-33 146.7 294 40.1
Solyc09g064630.3 Solanum lycopersicum HOM05D007706 ORTHO05D009593 3.3e-33 146.7 281 38.4
Ciclev10020687m.g Citrus clementina HOM05D007706 ORTHO05D009593 5.6e-33 146.0 280 42.1
CiPaw.03G270700 Carya illinoinensis HOM05D007706 ORTHO05D009593 1.2e-32 144.8 281 38.8
TWI12G0795 Tripterygium wilfordii HOM05D007706 ORTHO05D009593 1.6e-32 144.4 278 39.9
Cc01_g17810 Coffea canephora HOM05D007706 ORTHO05D009593 2.8e-32 143.7 280 39.3
ECA236G0985 Erigeron canadensis HOM05D007706 ORTHO05D009593 2.8e-32 143.7 287 40.4
Manes.12G037850 Manihot esculenta HOM05D007706 ORTHO05D009593 1.1e-31 141.7 296 38.2
Nn3g19784 Nelumbo nucifera HOM05D007706 ORTHO05D009593 1.4e-31 141.4 282 38.7
MD05G1189100 Malus domestica HOM05D007706 ORTHO05D009593 5.2e-31 139.4 287 39.4
Rhsim13G0040100 Rhododendron simsii HOM05D007706 ORTHO05D009593 5.2e-31 139.4 304 40.1
Ah.15g092610 Amaranthus hybridus HOM05D007706 ORTHO05D009593 8.9e-31 138.7 274 40.1
Prupe.8G215700 Prunus persica HOM05D007706 ORTHO05D009593 8.9e-31 138.7 287 39.4
HanXRQChr04g0108691 Helianthus annuus HOM05D007706 ORTHO05D009593 2.6e-30 137.1 285 43.5
FAN27G2030 Fragaria x ananassa HOM05D007706 ORTHO05D009593 1.7e-29 134.4 279 39.8
RcHm_v2.0_Chr6g0286691 Rosa chinensis HOM05D007706 ORTHO05D009593 2.9e-29 133.7 280 40.4
Lj2C1142T11 Lonicera japonica HOM05D007706 ORTHO05D009593 8.4e-29 132.1 286 40.2
Hma1.2p1_1930F.1_g307940 Hydrangea macrophylla HOM05D007706 ORTHO05D009593 3.2e-28 130.2 299 37.1
Migut.D00475 Erythranthe guttata HOM05D007706 ORTHO05D009593 5.4e-28 129.4 284 39.1
Lsat_1_v5_gn_8_92000 Lactuca sativa HOM05D007706 ORTHO05D009593 5.4e-28 129.4 271 42.1
Eucgr.A01320 Eucalyptus grandis HOM05D007706 ORTHO05D009593 9.3e-28 128.6 295 39.7
SalBow4G1824 Salvia bowleyana HOM05D007706 ORTHO05D009593 2.1e-27 127.5 273 38.1
Aqoxy5G00146 Aquilegia oxysepala HOM05D007706 ORTHO05D009593 4.6e-27 126.3 288 38.2
Peaxi162Scf00043g02924 Petunia axillaris HOM05D007706 ORTHO05D009593 4.6e-27 126.3 253 36.8
vmacro02710 Vaccinium macrocarpon HOM05D007706 ORTHO05D009593 7.8e-27 125.6 288 38.9
EL10Ac7g17683 Beta vulgaris HOM05D007706 ORTHO05D009593 1.7e-26 124.4 287 37.3
Dinv34676 Davidia involucrata HOM05D007706 ORTHO05D009593 2.3e-26 124.0 293 37.9
Nn1g02965 Nelumbo nucifera HOM05D007706 ORTHO05D009593 3.0e-26 123.6 309 37.2
FvH4_2g20530 Fragaria vesca HOM05D007706 ORTHO05D009593 1.1e-25 121.7 286 39.2
FAN24G1454 Fragaria x ananassa HOM05D007706 ORTHO05D009593 1.1e-25 121.7 286 39.2
Nitab4.5_0007992g0040 Nicotiana tabacum HOM05D007706 ORTHO05D009593 2.5e-25 120.6 287 37.6
TAR362G1069 Trochodendron aralioides HOM05D007706 ORTHO05D009593 1.3e-24 118.2 292 39.4
MBI07_g23229_MAGBIO Magnolia biondii HOM05D007706 ORTHO05D009593 2.8e-24 117.1 284 39.4
FAN15G0362 Fragaria x ananassa HOM05D007706 ORTHO05D009593 8.1e-24 115.5 282 38.7
Cpa.g.sc87.26 Carica papaya HOM05D007706 ORTHO05D009593 1.4e-23 114.8 297 32.3
Migut.N02230 Erythranthe guttata HOM05D007706 ORTHO05D009593 7.6e-22 109.0 288 39.6
SGA_v2.0_scaffold1G00652 Striga asiatica HOM05D007706 ORTHO05D009593 3.2e-20 103.6 278 37.4
AUR62008796 Chenopodium quinoa HOM05D007706 ORTHO05D009593 1.6e-19 101.3 284 35.6
Lalb_Chr01g0019491 Lupinus albus HOM05D007706 ORTHO05D009593 3.5e-19 100.1 111 55.0
MSTRG.18353 Avicennia marina HOM05D007706 ORTHO05D009593 4.6e-19 99.8 305 33.1
PSO541G4538 Papaver somniferum HOM05D007706 ORTHO05D009593 4.6e-19 99.8 292 30.5
PSO782G3886 Papaver somniferum HOM05D006910 ORTHO05D009593 6.0e-19 99.4 285 33.3
Prupe.1G049000 Prunus persica HOM05D006910 ORTHO05D008937 6.0e-19 99.4 280 36.4
CANSAT01G1705 Cannabis sativa HOM05D007706 ORTHO05D009593 7.9e-19 99.0 281 34.2
Gohir.A10G107300 Gossypium hirsutum HOM05D006910 ORTHO05D008937 3.9e-18 96.7 295 34.6
Potri.008G172200 Populus trichocarpa HOM05D006910 ORTHO05D008937 3.9e-18 96.7 291 32.0
Sopen12g010960 Solanum pennellii HOM05D000004 ORTHO05D009593 5.1e-18 96.3 165 40.0
Duzib151G0386 Durio zibethinus HOM05D006910 ORTHO05D008937 1.9e-17 94.4 287 34.1
CsaV3_6G007370 Cucumis sativus L. HOM05D007706 ORTHO05D009593 2.5e-17 94.0 276 33.0
Gohir.D10G160000 Gossypium hirsutum HOM05D006910 ORTHO05D008937 2.5e-17 94.0 275 33.1
PSO675G7213 Papaver somniferum HOM05D007706 ORTHO05D009593 3.3e-17 93.6 274 33.6
Gorai.011G179800 Gossypium raimondii HOM05D006910 ORTHO05D008937 7.3e-17 92.4 288 34.4
Atru.chr4.1910 Acer truncatum HOM05D006910 ORTHO05D008937 2.8e-16 90.5 289 33.6
GSVIVG01027919001 Vitis vinifera HOM05D006910 ORTHO05D008937 2.8e-16 90.5 295 34.9
Sabra08G0131500 Salix brachista HOM05D006910 ORTHO05D008937 9.0e-15 85.5 300 32.3
Haze_11463 Corylus avellana HOM05D006910 ORTHO05D008937 1.5e-14 84.7 280 31.8
CDE11G0528 Ceratophyllum demersum HOM05D007706 ORTHO05D009593 2.0e-14 84.3 281 30.6
Ciclev10004771m.g Citrus clementina HOM05D006910 ORTHO05D008937 6.4e-13 79.3 283 32.5
MELO3C022390.2 Cucumis melo HOM05D007706 ORTHO05D009593 6.4e-13 79.3 287 33.8
PSO478G1200 Papaver somniferum HOM05D006910 ORTHO05D009593 6.4e-13 79.3 215 33.0
Nitab4.5_0000845g0230 Nicotiana tabacum HOM05D007706 ORTHO05D009593 1.4e-12 78.2 85 52.9
CSS0021483 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 1.9e-12 77.8 293 31.7
MBI10_g26041_MAGBIO Magnolia biondii HOM05D007706 ORTHO05D009593 2.4e-12 77.4 277 31.8
Manes.03G158500 Manihot esculenta HOM05D006910 ORTHO05D008937 2.4e-12 77.4 277 31.8
Os03g0140700 Oryza sativa ssp. japonica HOM05D007706 ORTHO05D009593 2.4e-12 77.4 275 32.7
CDE05G1228 Ceratophyllum demersum HOM05D007706 ORTHO05D009593 3.2e-12 77.0 210 33.3
HPP92_022478 Vanilla planifolia HOM05D007706 ORTHO05D009593 7.1e-12 75.9 286 30.4
SalBow7G0697 Salvia bowleyana HOM05D007706 ORTHO05D009593 1.2e-11 75.1 272 33.1
Dinv29800 Davidia involucrata HOM05D006910 ORTHO05D008937 4.6e-11 73.2 323 29.4
Peaxi162Scf00319g00521 Petunia axillaris HOM05D006910 ORTHO05D008937 6.0e-11 72.8 289 31.8
CSS0004989 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 1.3e-10 71.6 294 31.0
Actinidia37550 Actinidia chinensis HOM05D006910 ORTHO05D008937 8.7e-10 68.9 87 48.3
SEGI_40436 Sequoiadendron giganteum HOM05D052464 ORTHO05D009593 2.5e-09 67.4 291 27.5
ATR0787G077 Amborella trichopoda HOM05D007706 ORTHO05D009593 4.3e-09 66.6 290 31.0
COL.COLO4_10568 Corchorus olitorius HOM05D007706 ORTHO05D009593 1.3e-08 65.1 49 65.3
vmacro15481 Vaccinium macrocarpon HOM05D006910 ORTHO05D008937 1.6e-08 64.7 53 58.5
Actinidia30127 Actinidia chinensis HOM05D007706 ORTHO05D009593 2.1e-08 64.3 74 48.6
AUR62025443 Chenopodium quinoa HOM05D006910 ORTHO05D008937 2.1e-08 64.3 89 44.9
PSO675G2181 Papaver somniferum HOM05D007706 ORTHO05D009593 3.7e-08 63.5 157 33.1
CSS0027831 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 1.4e-07 61.6 41 63.4
Dinv27116 Davidia involucrata HOM05D006910 ORTHO05D008937 1.8e-07 61.2 90 43.3
TAR622G1049 Trochodendron aralioides HOM05D027966 ORTHO05D025782 1.8e-07 61.2 193 31.1
Nn4g24887 Nelumbo nucifera HOM05D027966 ORTHO05D025782 3.1e-07 60.5 273 26.0
MD16G1226800 Malus domestica HOM05D006910 ORTHO05D008937 4.0e-07 60.1 233 33.9
Oeu026810.1 Olea europaea HOM05D007706 ORTHO05D009593 6.9e-07 59.3 88 45.5
Rhsim02G0044100 Rhododendron simsii HOM05D006910 ORTHO05D008937 1.5e-06 58.2 277 31.8
Sed0022884 Sechium edule HOM05D007706 ORTHO05D009593 2.6e-06 57.4 205 33.2
Hma1.2p1_0112F.1_g054780 Hydrangea macrophylla HOM05D006910 ORTHO05D008937 5.8e-06 56.2 43 60.5
DCAR_027350 Daucus carota HOM05D006910 ORTHO05D008937 1.0e-05 55.5 36 63.9
MBI02_g19811_MAGBIO Magnolia biondii HOM05D006910 ORTHO05D025782 1.0e-05 55.5 283 26.1


User provided reference genes

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