Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G017500 Glycine max HOM05D006434 ORTHO05D008069 5.8e-112 407.5 199 100.0
Glyma.13G066900 Glycine max HOM05D006434 ORTHO05D008069 1.5e-107 392.9 197 97.0
Phvul.004G023900 Phaseolus vulgaris HOM05D006434 ORTHO05D008069 6.2e-106 387.5 197 95.9
VMungo0464G0451 Vigna mungo HOM05D006434 ORTHO05D008069 4.0e-105 384.8 201 94.0
Lalb_Chr21g0319131 Lupinus albus HOM05D006434 ORTHO05D008069 1.2e-101 373.2 197 91.9
Lj2g0012157 Lotus japonicus HOM05D006434 ORTHO05D008069 3.3e-99 365.2 197 89.8
CANSAT64G2331 Cannabis sativa HOM05D006434 ORTHO05D008069 9.0e-97 357.1 197 85.8
PSO478G2838 Papaver somniferum HOM05D006434 ORTHO05D008069 3.8e-95 351.7 197 84.3
Hma1.2p1_0136F.1_g062090 Hydrangea macrophylla HOM05D006434 ORTHO05D008069 1.1e-94 350.1 197 84.3
Medtr6g009400 Medicago truncatula HOM05D006434 ORTHO05D008069 1.1e-94 350.1 197 85.8
Cfa007492 Carpinus fangiana HOM05D006434 ORTHO05D008069 1.4e-94 349.7 197 84.8
TPR.G32608 Trifolium pratense HOM05D006434 ORTHO05D008069 2.4e-94 349.0 197 85.3
PSO161G0076 Papaver somniferum HOM05D006434 ORTHO05D008069 3.2e-94 348.6 197 83.2
MELO3C021484.2 Cucumis melo HOM05D006434 ORTHO05D008069 5.4e-94 347.8 197 82.7
CsaV3_5G037720 Cucumis sativus L. HOM05D006434 ORTHO05D008069 1.2e-93 346.7 197 81.7
Dinv35002 Davidia involucrata HOM05D006434 ORTHO05D008069 3.5e-93 345.1 197 83.8
Sed0011674 Sechium edule HOM05D006434 ORTHO05D008069 3.5e-93 345.1 197 80.7
Actinidia06053 Actinidia chinensis HOM05D006434 ORTHO05D008069 4.6e-93 344.7 197 83.2
arahy.Tifrunner.gnm1.ann1.ICRE53 Arachis hypogaea HOM05D006434 ORTHO05D008069 4.6e-93 344.7 197 86.3
arahy.Tifrunner.gnm1.ann1.X2C98S Arachis hypogaea HOM05D006434 ORTHO05D008069 4.6e-93 344.7 197 86.3
Oeu022866.3 Olea europaea HOM05D006434 ORTHO05D008069 7.9e-93 344.0 197 82.7
RcHm_v2.0_Chr2g0169691 Rosa chinensis HOM05D006434 ORTHO05D008069 7.9e-93 344.0 197 84.3
FvH4_6g49670 Fragaria vesca HOM05D006434 ORTHO05D008069 1.0e-92 343.6 197 84.3
FAN02G4063 Fragaria x ananassa HOM05D006434 ORTHO05D008069 1.0e-92 343.6 197 84.3
FAN14G5872 Fragaria x ananassa HOM05D006434 ORTHO05D008069 1.0e-92 343.6 197 84.3
TAR629G3263 Trochodendron aralioides HOM05D006434 ORTHO05D008069 1.0e-92 343.6 197 83.8
COL.COLO4_36989 Corchorus olitorius HOM05D006434 ORTHO05D008069 1.7e-92 342.8 197 81.7
DCAR_006717 Daucus carota HOM05D006434 ORTHO05D008069 2.3e-92 342.4 197 81.7
Atru.chr8.2465 Acer truncatum HOM05D006434 ORTHO05D008069 3.0e-92 342.0 197 82.2
Potri.001G349800 Populus trichocarpa HOM05D006434 ORTHO05D008069 3.0e-92 342.0 197 82.7
Duzib264G0249 Durio zibethinus HOM05D006434 ORTHO05D008069 5.1e-92 341.3 197 82.2
FAN05G1688 Fragaria x ananassa HOM05D006434 ORTHO05D008069 5.1e-92 341.3 197 83.8
Gohir.D07G223600 Gossypium hirsutum HOM05D006434 ORTHO05D008069 5.1e-92 341.3 197 83.8
Gorai.001G257900 Gossypium raimondii HOM05D006434 ORTHO05D008069 5.1e-92 341.3 197 83.8
CSS0004781 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 6.6e-92 340.9 197 82.7
vmacro05779 Vaccinium macrocarpon HOM05D006434 ORTHO05D008069 6.6e-92 340.9 197 82.7
CSS0040499 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.5e-91 339.7 208 78.8
MD09G1042700 Malus domestica HOM05D006434 ORTHO05D008069 1.5e-91 339.7 197 83.2
PGR142G2438 Punica granatum HOM05D006434 ORTHO05D008069 1.5e-91 339.7 197 81.7
GSVIVG01032566001 Vitis vinifera HOM05D006434 ORTHO05D008069 1.9e-91 339.3 197 83.8
CAN.G1128.11 Capsicum annuum HOM05D006434 ORTHO05D008069 2.5e-91 339.0 197 82.2
Psat1g076480 Pisum sativum HOM05D006434 ORTHO05D008069 2.5e-91 339.0 197 83.2
Ciclev10012231m.g Citrus clementina HOM05D006434 ORTHO05D008069 4.3e-91 338.2 197 82.2
Eucgr.I01896 Eucalyptus grandis HOM05D006434 ORTHO05D008069 5.6e-91 337.8 197 82.2
QL02p079411 Quercus lobata HOM05D006434 ORTHO05D008069 7.4e-91 337.4 197 82.7
Aqoxy3G00846 Aquilegia oxysepala HOM05D006434 ORTHO05D008069 9.6e-91 337.0 197 80.2
Sabra16G0229200 Salix brachista HOM05D006434 ORTHO05D008069 1.3e-90 336.7 197 81.2
Thecc.04G069300 Theobroma cacao HOM05D006434 ORTHO05D008069 1.6e-90 336.3 197 80.7
Gohir.A07G216800 Gossypium hirsutum HOM05D006434 ORTHO05D008069 2.1e-90 335.9 197 82.2
Nn1g08819 Nelumbo nucifera HOM05D006434 ORTHO05D008069 2.1e-90 335.9 197 81.7
Rhsim10G0029400 Rhododendron simsii HOM05D006434 ORTHO05D008069 2.8e-90 335.5 197 82.7
Sc10g0004040 Simmondsia chinensis HOM05D006434 ORTHO05D008069 3.6e-90 335.1 198 80.3
Solyc02g067540.3 Solanum lycopersicum HOM05D006434 ORTHO05D008069 3.6e-90 335.1 197 81.2
Sopen02g016670 Solanum pennellii HOM05D006434 ORTHO05D008069 3.6e-90 335.1 197 81.2
PGSC0003DMG400006900 Solanum tuberosum HOM05D006434 ORTHO05D008069 3.6e-90 335.1 197 81.2
Nitab4.5_0001727g0150 Nicotiana tabacum HOM05D006434 ORTHO05D008069 4.8e-90 334.7 197 81.2
Manes.15G178000 Manihot esculenta HOM05D006434 ORTHO05D008069 8.1e-90 334.0 197 79.7
Peaxi162Scf00059g00128 Petunia axillaris HOM05D006434 ORTHO05D008069 1.4e-89 333.2 197 80.7
Cc07_g02850 Coffea canephora HOM05D006434 ORTHO05D008069 1.8e-89 332.8 197 81.7
TWI56G0494 Tripterygium wilfordii HOM05D006434 ORTHO05D008069 1.2e-88 330.1 197 78.7
ATR0665G567 Amborella trichopoda HOM05D006434 ORTHO05D008069 2.0e-88 329.3 197 79.2
AUR62018326 Chenopodium quinoa HOM05D006434 ORTHO05D008069 1.1e-86 323.6 197 77.7
CSS0001127 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 2.4e-86 322.4 210 75.2
MSTRG.23964 Avicennia marina HOM05D006434 ORTHO05D008069 7.1e-86 320.9 196 79.1
Thhalv10004634m.g Eutrema salsugineum HOM05D006434 ORTHO05D008069 1.6e-85 319.7 197 78.2
Sp2g17230 Schrenkiella parvula HOM05D006434 ORTHO05D008069 1.6e-85 319.7 197 78.2
Migut.H00876 Erythranthe guttata HOM05D006434 ORTHO05D008069 4.6e-85 318.2 196 78.6
CARHR292500 Cardamine hirsuta HOM05D006434 ORTHO05D008069 7.9e-85 317.4 197 77.7
ECA232G4812 Erigeron canadensis HOM05D006434 ORTHO05D008069 1.0e-84 317.0 196 78.1
BcaC06g33735 Brassica carinata HOM05D006434 ORTHO05D008069 2.3e-84 315.8 197 76.6
unitig_744.g24344 Utricularia gibba HOM05D006434 ORTHO05D008069 2.3e-84 315.8 196 78.6
CSS0033350 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 3.0e-84 315.5 210 74.8
SGA_v2.0_scaffold205G41750 Striga asiatica HOM05D006434 ORTHO05D008069 3.0e-84 315.5 196 76.5
Carub.0005s0699 Capsella rubella HOM05D006434 ORTHO05D008069 3.9e-84 315.1 197 76.6
AUR62030560 Chenopodium quinoa HOM05D006434 ORTHO05D008069 6.7e-84 314.3 209 72.7
AL5G18090 Arabidopsis lyrata HOM05D006434 ORTHO05D008069 8.7e-84 313.9 197 76.1
FAN09G0258 Fragaria x ananassa HOM05D006434 ORTHO05D008069 1.9e-83 312.8 183 83.6
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 2.5e-83 312.4 174 84.5
Lsat_1_v5_gn_4_180280 Lactuca sativa HOM05D006434 ORTHO05D008069 2.5e-83 312.4 209 74.2
A06p40510 Brassica napus HOM05D006434 ORTHO05D008069 4.3e-83 311.6 200 76.0
C07p37520 Brassica napus HOM05D006434 ORTHO05D008069 4.3e-83 311.6 200 76.0
BolC7t44265H Brassica oleracea HOM05D006434 ORTHO05D008069 4.3e-83 311.6 200 76.0
BraA06t26970Z Brassica rapa HOM05D006434 ORTHO05D008069 4.3e-83 311.6 200 76.0
Ca_04243_v3 Cicer arietinum L. HOM05D006434 ORTHO05D008069 5.6e-83 311.2 223 70.9
THA.LOC104823923 Tarenaya hassleriana HOM05D006434 ORTHO05D008069 5.6e-83 311.2 197 74.1
HanXRQChr15g0488521 Helianthus annuus HOM05D006434 ORTHO05D008069 7.4e-83 310.8 196 77.0
Aa31LG2G4610 Aethionema arabicum HOM05D006434 ORTHO05D008069 1.3e-82 310.1 200 76.5
CDE02G1577 Ceratophyllum demersum HOM05D006434 ORTHO05D008069 1.8e-81 306.2 197 73.6
CiPaw.03G032300 Carya illinoinensis HOM05D006434 ORTHO05D008069 2.4e-81 305.8 174 84.5
Nitab4.5_0003431g0070 Nicotiana tabacum HOM05D006434 ORTHO05D008069 2.2e-79 299.3 174 82.8
Os03g0736400 Oryza sativa ssp. japonica HOM05D006434 ORTHO05D008069 3.2e-78 295.4 197 70.6
EL10Ac2g02902 Beta vulgaris HOM05D006434 ORTHO05D008069 4.2e-78 295.0 228 67.1
HPP92_023566 Vanilla planifolia HOM05D006434 ORTHO05D008069 4.2e-78 295.0 196 71.4
Cpa.g.sc14.62 Carica papaya HOM05D006434 ORTHO05D008069 3.3e-75 285.4 175 79.4
Haze_14607 Corylus avellana HOM05D006434 ORTHO05D008069 3.4e-72 275.4 175 77.1
CSS0043817 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.3e-71 273.5 180 74.4
Prupe.3G275100 Prunus persica HOM05D006434 ORTHO05D008069 5.0e-71 271.6 156 84.6
SalBow1G5247 Salvia bowleyana HOM05D006434 ORTHO05D008069 6.7e-68 261.2 160 75.0
AT3G28460 Arabidopsis thaliana HOM05D006434 ORTHO05D008069 3.3e-67 258.8 159 78.6
Zm00001eb215320 Zea mays HOM05D006434 ORTHO05D008069 4.8e-66 255.0 197 64.0
AagrBONN_evm.TU.Sc2ySwM_344.3988 Anthoceros agrestis HOM05D006434 ORTHO05D008069 1.4e-60 236.9 197 59.9
Pp3c7_630 Physcomitrium patens HOM05D006434 ORTHO05D008069 2.8e-58 229.2 199 58.3
SMO171G0075 Selaginella moellendorffii HOM05D006434 ORTHO05D008069 8.2e-58 227.6 192 57.3
Lj7A404T37 Lonicera japonica HOM05D006434 ORTHO05D008069 5.5e-54 214.9 117 87.2
Mapoly0140s0031 Marchantia polymorpha HOM05D006434 ORTHO05D008069 6.1e-53 211.5 199 53.8
MBI01_g13068_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 1.1e-51 207.2 117 84.6
Hund13291 Selenicereus undatus HOM05D006434 ORTHO05D008069 2.5e-46 189.5 116 77.6
CBR_g31858 Chara braunii HOM05D006434 ORTHO05D008069 1.5e-43 180.3 198 50.0
SEGI_25544 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 2.8e-42 176.0 161 55.9
SEGI_38692 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 1.9e-38 163.3 122 63.9
PRCOL_00006620 Prasinoderma coloniale HOM05D006434 ORTHO05D008069 4.2e-38 162.2 198 41.4
Cre13.g566300 Chlamydomonas reinhardtii HOM05D006434 ORTHO05D008069 2.7e-37 159.5 196 42.3
Solyc01g057060.1 Solanum lycopersicum HOM05D006434 ORTHO05D008069 2.8e-29 132.9 95 70.5
MBI01_g13070_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 3.6e-29 132.5 78 78.2
Sopen01g021310 Solanum pennellii HOM05D006434 ORTHO05D008069 1.0e-28 131.0 91 73.6
MCO03G139 Micromonas commoda HOM05D006434 ORTHO05D008069 4.9e-26 122.1 111 51.4
MD17G1044100 Malus domestica HOM05D006434 ORTHO05D008069 4.5e-24 115.5 61 90.2
TAR371G0222 Trochodendron aralioides HOM05D006434 ORTHO05D008069 2.8e-21 106.3 75 70.7
Lsat_1_v5_gn_7_34121 Lactuca sativa HOM05D006434 ORTHO05D008069 1.2e-08 64.3 37 78.4
Lj7A404T38 Lonicera japonica HOM05D006434 ORTHO05D008069 2.3e-07 60.1 133 31.6


User provided reference genes

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