Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G253900 Glycine max HOM05D001638 ORTHO05D005197 5.6e-191 671.0 397 100.0
Glyma.09G089400 Glycine max HOM05D001638 ORTHO05D005197 7.1e-170 600.9 399 91.2
Phvul.008G045000 Phaseolus vulgaris HOM05D001638 ORTHO05D005197 5.3e-165 584.7 401 82.5
VMungo1383G3402 Vigna mungo HOM05D001638 ORTHO05D005197 9.6e-159 563.9 402 76.6
LjContig00564g0006049 Lotus japonicus HOM05D001638 ORTHO05D005197 2.6e-156 555.8 399 80.2
arahy.Tifrunner.gnm1.ann1.MQ0E05 Arachis hypogaea HOM05D001638 ORTHO05D005197 3.8e-155 552.0 402 83.3
arahy.Tifrunner.gnm1.ann1.9JI82G Arachis hypogaea HOM05D001638 ORTHO05D005197 1.6e-153 546.6 332 86.1
Ca_04112_v3 Cicer arietinum L. HOM05D001638 ORTHO05D005197 1.6e-153 546.6 332 87.0
Medtr5g064850 Medicago truncatula HOM05D001638 ORTHO05D005197 7.4e-151 537.7 396 79.0
Psat0s3614g0040 Pisum sativum HOM05D001638 ORTHO05D005197 9.7e-151 537.3 409 78.0
Medtr7g007890 Medicago truncatula HOM05D001638 ORTHO05D005197 3.7e-150 535.4 396 79.0
Lalb_Chr19g0127051 Lupinus albus HOM05D001638 ORTHO05D005197 2.8e-142 509.2 314 83.8
TPR.G11809 Trifolium pratense HOM05D001638 ORTHO05D005197 4.4e-135 485.3 359 73.8
Ciclev10015475m.g Citrus clementina HOM05D001638 ORTHO05D005197 3.1e-125 452.6 327 72.5
CSS0022011 Camellia sinensis var. sinensis HOM05D001638 ORTHO05D005197 2.6e-124 449.5 325 72.9
GSVIVG01018246001 Vitis vinifera HOM05D001638 ORTHO05D005197 1.5e-122 443.7 330 71.8
Gohir.A13G033800 Gossypium hirsutum HOM05D001638 ORTHO05D005197 9.4e-122 441.0 324 70.7
Dinv44076 Davidia involucrata HOM05D001638 ORTHO05D005197 1.6e-121 440.3 330 70.3
Eucgr.F04452 Eucalyptus grandis HOM05D001638 ORTHO05D005197 4.7e-121 438.7 331 69.2
Rhsim07G0034600 Rhododendron simsii HOM05D001638 ORTHO05D005197 4.7e-121 438.7 325 70.5
Actinidia40391 Actinidia chinensis HOM05D001638 ORTHO05D005197 5.2e-120 435.3 328 71.3
TAR629G0136 Trochodendron aralioides HOM05D001638 ORTHO05D005197 6.8e-120 434.9 341 68.3
Gorai.013G036600 Gossypium raimondii HOM05D001638 ORTHO05D005197 2.0e-119 433.3 319 70.8
vmacro16776 Vaccinium macrocarpon HOM05D001638 ORTHO05D005197 5.7e-119 431.8 325 69.2
Dinv43635 Davidia involucrata HOM05D001638 ORTHO05D005197 2.2e-118 429.9 330 68.8
Nn6g33853 Nelumbo nucifera HOM05D001638 ORTHO05D005197 1.1e-117 427.6 329 68.1
TAR636G3630 Trochodendron aralioides HOM05D001638 ORTHO05D005197 1.1e-117 427.6 321 71.0
Gohir.D13G032100 Gossypium hirsutum HOM05D001638 ORTHO05D005197 2.4e-117 426.4 316 70.3
MSTRG.12501 Avicennia marina HOM05D001638 ORTHO05D005197 5.3e-117 425.2 331 66.5
Duzib132G0757 Durio zibethinus HOM05D001638 ORTHO05D005197 1.2e-116 424.1 331 69.2
Thecc.02G084000 Theobroma cacao HOM05D001638 ORTHO05D005197 1.2e-116 424.1 326 69.3
Manes.01G272000 Manihot esculenta HOM05D001638 ORTHO05D005197 4.5e-116 422.2 332 66.6
MBI04_g36329_MAGBIO Magnolia biondii HOM05D001638 ORTHO05D005197 1.0e-115 421.0 356 62.6
SGA_v2.0_scaffold5G02962 Striga asiatica HOM05D001638 ORTHO05D005197 1.3e-115 420.6 331 67.1
MD02G1217000 Malus domestica HOM05D001638 ORTHO05D005197 2.2e-115 419.9 334 67.1
CiPaw.14G021800 Carya illinoinensis HOM05D001638 ORTHO05D005197 3.8e-115 419.1 328 67.7
Potri.019G085100 Populus trichocarpa HOM05D001638 ORTHO05D005197 8.5e-115 417.9 320 66.6
Cfa011091 Carpinus fangiana HOM05D001638 ORTHO05D005197 2.5e-114 416.4 313 70.6
CANSAT56G0649 Cannabis sativa HOM05D001638 ORTHO05D005197 5.5e-114 415.2 324 66.4
Prupe.2G127200 Prunus persica HOM05D001638 ORTHO05D005197 4.7e-113 412.1 337 65.6
Sc02g0002980 Simmondsia chinensis HOM05D001638 ORTHO05D005197 1.4e-112 410.6 330 65.2
Cc02_g24880 Coffea canephora HOM05D001638 ORTHO05D005197 1.8e-112 410.2 326 68.1
PGR031G2794 Punica granatum HOM05D001638 ORTHO05D005197 4.0e-112 409.1 327 66.1
AUR62023428 Chenopodium quinoa HOM05D001638 ORTHO05D005197 2.0e-111 406.8 330 64.8
Migut.N01781 Erythranthe guttata HOM05D001638 ORTHO05D005197 2.6e-111 406.4 333 65.5
BolC7t45021H Brassica oleracea HOM05D001638 ORTHO05D005197 4.4e-111 405.6 323 65.6
BraA03t13813Z Brassica rapa HOM05D001638 ORTHO05D005197 4.4e-111 405.6 325 65.8
A03p46940 Brassica napus HOM05D001638 ORTHO05D005197 5.7e-111 405.2 325 65.8
C07p44980 Brassica napus HOM05D001638 ORTHO05D005197 1.3e-110 404.1 322 65.5
CsaV3_3G007540 Cucumis sativus L. HOM05D001638 ORTHO05D005197 3.7e-110 402.5 334 65.3
COL.COLO4_25944 Corchorus olitorius HOM05D001638 ORTHO05D005197 4.8e-110 402.1 322 68.6
DCAR_023354 Daucus carota HOM05D001638 ORTHO05D005197 1.1e-109 401.0 350 62.9
RcHm_v2.0_Chr1g0346971 Rosa chinensis HOM05D001638 ORTHO05D005197 1.8e-109 400.2 334 64.7
BcaC04g23457 Brassica carinata HOM05D001638 ORTHO05D005197 4.1e-109 399.1 336 63.1
MELO3C005976.2 Cucumis melo HOM05D001638 ORTHO05D005197 4.1e-109 399.1 332 63.9
SalBow6G5432 Salvia bowleyana HOM05D001638 ORTHO05D005197 4.1e-109 399.1 344 63.7
TWI23G0567 Tripterygium wilfordii HOM05D001638 ORTHO05D005197 4.1e-109 399.1 330 64.5
CARHR275090 Cardamine hirsuta HOM05D001638 ORTHO05D005197 5.4e-109 398.7 328 63.1
Sed0004454 Sechium edule HOM05D001638 ORTHO05D005197 5.4e-109 398.7 335 65.1
AT5G61330 Arabidopsis thaliana HOM05D001638 ORTHO05D005197 9.1e-109 397.9 331 63.1
ClCG05G000380 Citrullus lanatus HOM05D001638 ORTHO05D005197 1.2e-108 397.5 333 64.6
QL04p031108 Quercus lobata HOM05D001638 ORTHO05D005197 1.2e-108 397.5 329 64.7
Sp2g24540 Schrenkiella parvula HOM05D001638 ORTHO05D005197 1.6e-108 397.1 322 65.5
C09p08140 Brassica napus HOM05D001638 ORTHO05D005197 2.7e-108 396.4 332 63.0
BolC9t53726H Brassica oleracea HOM05D001638 ORTHO05D005197 2.7e-108 396.4 332 63.0
Lj9C558G6 Lonicera japonica HOM05D001638 ORTHO05D001875 1.7e-107 393.7 345 63.5
AL8G37990 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 2.9e-107 392.9 329 62.6
EL10Ac1g00784 Beta vulgaris HOM05D001638 ORTHO05D005197 2.9e-107 392.9 333 63.1
A09p07280 Brassica napus HOM05D001638 ORTHO05D005197 2.9e-107 392.9 332 63.0
Thhalv10004255m.g Eutrema salsugineum HOM05D001638 ORTHO05D005197 6.6e-107 391.7 329 62.6
BcaB04g19906 Brassica carinata HOM05D001638 ORTHO05D005197 1.1e-106 391.0 337 62.3
FAN10G2339 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.5e-106 390.6 338 62.1
FAN10G1788 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.9e-106 390.2 338 61.8
HanXRQChr14g0428901 Helianthus annuus HOM05D001638 ORTHO05D005197 1.9e-106 390.2 335 63.0
FvH4_7g09810 Fragaria vesca HOM05D001638 ORTHO05D005197 3.3e-106 389.4 338 62.1
HanXRQChr01g0007441 Helianthus annuus HOM05D001638 ORTHO05D005197 1.6e-105 387.1 325 64.0
BcaC06g33229 Brassica carinata HOM05D001638 ORTHO05D005197 2.1e-105 386.7 328 63.1
Lsat_1_v5_gn_4_15080 Lactuca sativa HOM05D001638 ORTHO05D005197 2.1e-105 386.7 333 63.7
Carub.0008s2200 Capsella rubella HOM05D001638 ORTHO05D005197 3.6e-105 386.0 332 61.4
Ah.03g133920 Amaranthus hybridus HOM05D001638 ORTHO05D005197 8.0e-105 384.8 330 61.2
BraA09t36377Z Brassica rapa HOM05D001638 ORTHO05D005197 8.0e-105 384.8 326 62.6
FAN01G1872 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.4e-104 384.0 335 61.5
PGSC0003DMG400026041 Solanum tuberosum HOM05D001638 ORTHO05D005197 1.4e-104 384.0 321 65.1
Hund17077 Selenicereus undatus HOM05D001638 ORTHO05D005197 3.0e-104 382.9 356 59.8
PSO541G3735 Papaver somniferum HOM05D001638 ORTHO05D005197 4.0e-104 382.5 312 63.8
Sabra19G0096200 Salix brachista HOM05D001638 ORTHO05D005197 6.8e-104 381.7 372 57.3
Peaxi162Scf00392g00227 Petunia axillaris HOM05D001638 ORTHO05D005197 2.0e-103 380.2 290 68.6
unitig_37.g13004 Utricularia gibba HOM05D000186 ORTHO05D001124 2.6e-103 379.8 337 59.6
Solyc01g090470.3 Solanum lycopersicum HOM05D001638 ORTHO05D005197 3.4e-103 379.4 318 65.1
Sopen01g036260 Solanum pennellii HOM05D001638 ORTHO05D005197 3.4e-103 379.4 318 65.4
THA.LOC104818326 Tarenaya hassleriana HOM05D001638 ORTHO05D005197 5.7e-103 378.6 329 62.0
PSO170G6800 Papaver somniferum HOM05D001638 ORTHO05D005197 2.2e-102 376.7 301 64.8
CAN.G362.16 Capsicum annuum HOM05D001638 ORTHO05D005197 7.0e-101 371.7 285 68.4
Os01g0526200 Oryza sativa ssp. japonica HOM05D001638 ORTHO05D005197 1.0e-99 367.9 331 58.6
Aqoxy7G00848 Aquilegia oxysepala HOM05D001638 ORTHO05D005197 5.0e-99 365.5 340 58.8
Aa31LG11G2080 Aethionema arabicum HOM05D001638 ORTHO05D005197 3.6e-97 359.4 312 62.2
PSO017G3357 Papaver somniferum HOM05D001638 ORTHO05D005197 3.6e-97 359.4 293 63.5
DCAR_029773 Daucus carota HOM05D001638 ORTHO05D005197 8.0e-97 358.2 286 66.4
CDE03G0227 Ceratophyllum demersum HOM05D001638 ORTHO05D005197 2.6e-95 353.2 332 58.4
Lsat_1_v5_gn_4_70960 Lactuca sativa HOM05D001638 ORTHO05D005197 1.2e-92 344.4 340 58.2
FAN06G3795 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.3e-91 340.9 445 47.2
HPP92_024242 Vanilla planifolia HOM05D001638 ORTHO05D005197 7.3e-90 335.1 320 59.4
QL01p011221 Quercus lobata HOM05D001638 ORTHO05D005197 9.5e-90 334.7 344 56.4
ATR0057G068 Amborella trichopoda HOM05D001638 ORTHO05D005197 2.8e-89 333.2 311 58.8
ECA234G3220 Erigeron canadensis HOM05D001638 ORTHO05D005197 1.1e-88 331.3 304 61.5
Zm00001eb333990 Zea mays HOM05D001638 ORTHO05D005197 4.4e-87 325.9 299 57.9
Zm00001eb127190 Zea mays HOM05D001638 ORTHO05D005197 9.8e-87 324.7 299 57.2
SEGI_12976 Sequoiadendron giganteum HOM05D001638 ORTHO05D005197 3.2e-85 319.7 336 52.7
Thhalv10020921m.g Eutrema salsugineum HOM05D001638 ORTHO05D005197 3.0e-83 313.2 309 56.3
AL1G10102 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 1.6e-81 307.4 313 56.2
Nitab4.5_0000914g0150 Nicotiana tabacum HOM05D001638 ORTHO05D005197 2.3e-75 287.0 288 58.0
Nitab4.5_0010229g0010 Nicotiana tabacum HOM05D001638 ORTHO05D005197 1.3e-70 271.2 225 64.9
SGA_v2.0_scaffold131G34466 Striga asiatica HOM05D001638 ORTHO05D005197 3.4e-63 246.5 213 62.4
Mapoly0029s0122 Marchantia polymorpha HOM05D001638 ORTHO05D005197 3.9e-59 233.0 347 41.5
MD07G1102000 Malus domestica HOM05D001638 ORTHO05D005197 1.5e-58 231.1 215 59.5
Pp3c5_7370 Physcomitrium patens HOM05D001638 ORTHO05D005197 1.9e-58 230.7 326 41.7
SHI03505 Sapria himalayana HOM05D001638 ORTHO05D005197 6.4e-54 215.7 312 46.8
arahy.Tifrunner.gnm1.ann1.XG8PKW Arachis hypogaea HOM05D001638 ORTHO05D005197 3.3e-50 203.4 176 64.8
Atru.chr5.164 Acer truncatum HOM05D001638 ORTHO05D005197 3.4e-47 193.4 155 66.5
AUR62013726 Chenopodium quinoa HOM05D001638 ORTHO05D005197 4.5e-47 193.0 138 71.7
Cre13.g587000 Chlamydomonas reinhardtii HOM05D001638 ORTHO05D005197 4.8e-41 172.9 387 34.1
FAN06G4892 Fragaria x ananassa HOM05D001638 ORTHO05D005197 5.3e-40 169.5 147 60.5
AL4G38750 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 2.6e-39 167.2 156 59.0
FAN03G2111 Fragaria x ananassa HOM05D001638 ORTHO05D001690 2.6e-39 167.2 160 57.5
Atru.chr5.165 Acer truncatum HOM05D001638 ORTHO05D005197 6.5e-38 162.5 114 76.3
Actinidia12156 Actinidia chinensis HOM05D001638 ORTHO05D005197 5.5e-37 159.5 115 68.7
SMO141G0070 Selaginella moellendorffii HOM05D001638 ORTHO05D005197 1.6e-36 157.9 265 38.1
MCO04G285 Micromonas commoda HOM05D001638 ORTHO05D005197 5.1e-35 152.9 344 32.8
Haze_17173 Corylus avellana HOM05D001638 ORTHO05D005197 3.7e-33 146.7 212 45.8
arahy.Tifrunner.gnm1.ann1.HIFV4E Arachis hypogaea HOM05D001638 ORTHO05D005197 3.3e-26 123.6 176 45.5
MD02G1263900 Malus domestica HOM05D001638 ORTHO05D005197 5.7e-26 122.9 97 63.9
Actinidia12157 Actinidia chinensis HOM05D001638 ORTHO05D005197 3.8e-22 110.2 69 81.2
Cpa.g.sc116.74 Carica papaya HOM05D001638 ORTHO05D005197 2.5e-21 107.5 81 66.7
arahy.Tifrunner.gnm1.ann1.XV6DNZ Arachis hypogaea HOM05D001638 ORTHO05D005197 3.2e-21 107.1 63 87.3
MD07G1101900 Malus domestica HOM05D001638 ORTHO05D005197 3.6e-20 103.6 165 38.2
arahy.Tifrunner.gnm1.ann1.11FR17 Arachis hypogaea HOM05D001638 ORTHO05D005197 4.7e-20 103.2 61 83.6
AagrBONN_evm.TU.Sc2ySwM_368.1521 Anthoceros agrestis HOM05D001638 ORTHO05D005197 1.8e-19 101.3 94 55.3
Actinidia12155 Actinidia chinensis HOM05D001638 ORTHO05D005197 1.5e-18 98.2 78 66.7
Cpa.g.c42599 Carica papaya HOM05D001638 ORTHO05D005197 1.5e-18 98.2 65 76.9
PRCOL_00005874 Prasinoderma coloniale HOM05D001638 ORTHO05D005197 5.7e-18 96.3 337 26.4
Oeu051899.1 Olea europaea HOM05D001638 ORTHO05D005197 2.8e-17 94.0 63 73.0
CBR_g1066 Chara braunii HOM05D001638 ORTHO05D005197 4.8e-17 93.2 163 38.7
FAN06G4261 Fragaria x ananassa HOM05D001638 ORTHO05D005197 4.8e-17 93.2 135 47.4
FvH4_7g09370 Fragaria vesca HOM05D001638 ORTHO05D005197 2.4e-16 90.9 135 44.4
MD02G1264000 Malus domestica HOM05D001638 ORTHO05D005197 1.5e-15 88.2 68 67.6
Oeu021607.1 Olea europaea HOM05D001638 ORTHO05D005197 2.6e-15 87.4 63 66.7
MD02G1264200 Malus domestica HOM05D001638 ORTHO05D005197 3.5e-15 87.0 66 72.7
MD07G1102300 Malus domestica HOM05D001638 ORTHO05D005197 3.5e-15 87.0 104 50.0
FAN06G2650 Fragaria x ananassa HOM05D001638 ORTHO05D005197 8.0e-12 75.9 91 51.6
Cfa024988 Carpinus fangiana HOM05D001638 ORTHO05D124161 1.5e-10 71.6 325 26.8
Sed0021805 Sechium edule HOM05D001638 ORTHO05D005197 9.7e-10 68.9 110 45.5
CBR_g1068 Chara braunii HOM05D001638 ORTHO05D005197 2.4e-08 64.3 125 32.0
arahy.Tifrunner.gnm1.ann1.R2G04T Arachis hypogaea HOM05D001638 ORTHO05D005197 5.3e-08 63.2 30 96.7


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