Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G199300 Glycine max HOM05D000139 ORTHO05D029709 1.3e-35 152.5 76 100.0
Glyma.14G199700 Glycine max HOM05D000139 ORTHO05D010351 7.3e-15 83.6 69 60.9
Glyma.14G199600 Glycine max HOM05D000139 ORTHO05D010351 5.8e-12 73.9 60 65.0
Medtr5g073840 Medicago truncatula HOM05D000139 ORTHO05D010351 6.4e-11 70.5 72 51.4
Medtr5g073860 Medicago truncatula HOM05D000139 ORTHO05D010351 2.4e-10 68.6 53 58.5
Medtr5g073460 Medicago truncatula HOM05D000139 ORTHO05D000103 3.2e-10 68.2 54 63.0
TPR.G27407 Trifolium pratense HOM05D000139 ORTHO05D010351 5.4e-10 67.4 80 47.5
Medtr5g074450 Medicago truncatula HOM05D002545 ORTHO05D002335 9.2e-10 66.6 54 57.4
TPR.G27408 Trifolium pratense HOM05D000139 ORTHO05D010351 1.6e-09 65.9 55 56.4
LjContig00141g0019613 Lotus japonicus HOM05D000139 ORTHO05D010351 2.1e-09 65.5 80 43.8
Medtr3g464010 Medicago truncatula HOM05D000139 ORTHO05D010351 2.1e-09 65.5 75 48.0
arahy.Tifrunner.gnm1.ann1.47MQLD Arachis hypogaea HOM05D000139 ORTHO05D000103 6.0e-09 63.9 54 57.4
Ca_05658_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 6.0e-09 63.9 80 46.2
Medtr5g073960 Medicago truncatula HOM05D000139 ORTHO05D010351 1.3e-08 62.8 59 54.2
Glyma.02G231900 Glycine max HOM05D000139 ORTHO05D010351 1.7e-08 62.4 49 57.1
arahy.Tifrunner.gnm1.ann1.5Y376T Arachis hypogaea HOM05D000139 ORTHO05D010351 2.3e-08 62.0 57 57.9
arahy.Tifrunner.gnm1.ann1.6DK79V Arachis hypogaea HOM05D000139 ORTHO05D010351 2.3e-08 62.0 54 55.6
Medtr5g073620 Medicago truncatula HOM05D000139 ORTHO05D010351 3.0e-08 61.6 44 63.6
Medtr5g073660 Medicago truncatula HOM05D000139 ORTHO05D266772 3.0e-08 61.6 44 63.6
Medtr5g073820 Medicago truncatula HOM05D000139 ORTHO05D010351 3.0e-08 61.6 44 63.6
LjContig00141g0005562 Lotus japonicus HOM05D000139 ORTHO05D010351 3.9e-08 61.2 69 44.9
Lalb_Chr17g0345331 Lupinus albus HOM05D000139 ORTHO05D000103 3.9e-08 61.2 49 59.2
Psat2g054880 Pisum sativum HOM05D000139 ORTHO05D010351 3.9e-08 61.2 74 43.2
Medtr5g074190 Medicago truncatula HOM05D001165 ORTHO05D010351 5.1e-08 60.8 48 58.3
arahy.Tifrunner.gnm1.ann1.PW0779 Arachis hypogaea HOM05D000139 ORTHO05D000103 8.7e-08 60.1 51 58.8
Medtr5g093530 Medicago truncatula HOM05D000139 ORTHO05D010351 8.7e-08 60.1 48 58.3
arahy.Tifrunner.gnm1.ann1.5S97B2 Arachis hypogaea HOM05D000139 ORTHO05D010351 1.1e-07 59.7 55 49.1
arahy.Tifrunner.gnm1.ann1.JG7RLL Arachis hypogaea HOM05D000139 ORTHO05D000103 1.5e-07 59.3 54 53.7
Medtr5g074130 Medicago truncatula HOM05D000139 ORTHO05D010351 1.5e-07 59.3 51 54.9
Medtr5g073480 Medicago truncatula HOM05D000139 ORTHO05D010351 2.5e-07 58.5 54 50.0
Medtr5g073470 Medicago truncatula HOM05D000139 ORTHO05D010351 4.3e-07 57.8 54 53.7
Phvul.008G252300 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 4.3e-07 57.8 49 55.1
arahy.Tifrunner.gnm1.ann1.624Y80 Arachis hypogaea HOM05D000139 ORTHO05D010351 5.6e-07 57.4 48 60.4
arahy.Tifrunner.gnm1.ann1.MWQM2H Arachis hypogaea HOM05D000139 ORTHO05D010351 5.6e-07 57.4 48 60.4
Glyma.06G200300 Glycine max HOM05D000139 ORTHO05D010351 7.3e-07 57.0 52 51.9
arahy.Tifrunner.gnm1.ann1.GR7VGW Arachis hypogaea HOM05D000139 ORTHO05D010351 9.6e-07 56.6 55 47.3
arahy.Tifrunner.gnm1.ann1.SDH2U8 Arachis hypogaea HOM05D000139 ORTHO05D010351 9.6e-07 56.6 74 41.9
arahy.Tifrunner.gnm1.ann1.T11BLV Arachis hypogaea HOM05D000139 ORTHO05D000103 1.2e-06 56.2 55 45.5
Lalb_Chr10g0103531 Lupinus albus HOM05D000139 ORTHO05D010351 1.2e-06 56.2 42 61.9
Psat2g054680 Pisum sativum HOM05D000139 ORTHO05D029709 1.2e-06 56.2 51 54.9
Lalb_Chr04g0251941 Lupinus albus HOM05D000081 ORTHO05D014784 1.6e-06 55.8 55 45.5
Lalb_Chr10g0103581 Lupinus albus HOM05D000139 ORTHO05D010351 1.6e-06 55.8 54 53.7
Medtr5g073920 Medicago truncatula HOM05D000139 ORTHO05D010351 1.6e-06 55.8 43 60.5
Phvul.008G252432 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 1.6e-06 55.8 54 57.4
Psat2g054200 Pisum sativum HOM05D000139 ORTHO05D010351 1.6e-06 55.8 54 53.7
Glyma.17G240200 Glycine max HOM05D000139 ORTHO05D010351 2.1e-06 55.5 52 51.9
Lalb_Chr05g0220931 Lupinus albus HOM05D000005 ORTHO05D000012 2.1e-06 55.5 42 59.5
Medtr5g073830 Medicago truncatula HOM05D000139 ORTHO05D010351 2.1e-06 55.5 72 45.8
Medtr5g073810 Medicago truncatula HOM05D000139 ORTHO05D010351 2.8e-06 55.1 54 48.1
Glyma.02G232000 Glycine max HOM05D000139 ORTHO05D010351 3.6e-06 54.7 52 50.0
Medtr5g073880 Medicago truncatula HOM05D000139 ORTHO05D010351 3.6e-06 54.7 51 54.9
Phvul.008G252500 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 3.6e-06 54.7 49 57.1
Psat2g054640 Pisum sativum HOM05D000139 ORTHO05D000103 3.6e-06 54.7 54 51.9
arahy.Tifrunner.gnm1.ann1.T74DGZ Arachis hypogaea HOM05D000139 ORTHO05D000103 6.2e-06 53.9 69 44.9
Phvul.008G167600 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 6.2e-06 53.9 49 55.1
Psat2g054760 Pisum sativum HOM05D000139 ORTHO05D014784 6.2e-06 53.9 45 51.1
Glyma.14G199800 Glycine max HOM05D000081 ORTHO05D014784 8.1e-06 53.5 41 58.5


User provided reference genes

Program Settings