Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G259900 Glycine max HOM05D006869 ORTHO05D008641 6.5e-71 270.8 154 100.0
Phvul.005G061500 Phaseolus vulgaris HOM05D006869 ORTHO05D008641 7.8e-56 220.7 142 85.2
TPR.G26622 Trifolium pratense HOM05D006869 ORTHO05D008641 3.5e-48 195.3 152 73.7
VMungo1080G1596 Vigna mungo HOM05D006869 ORTHO05D008641 1.0e-47 193.7 114 90.4
Medtr2g071640 Medicago truncatula HOM05D006869 ORTHO05D008641 1.3e-47 193.4 152 71.7
Ca_03396_v3 Cicer arietinum L. HOM05D006869 ORTHO05D008641 1.7e-47 193.0 154 74.7
Glyma.15G248100 Glycine max HOM05D006869 ORTHO05D008641 3.0e-47 192.2 130 83.1
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 5.0e-47 191.4 138 76.8
Lalb_Chr25g0285441 Lupinus albus HOM05D006869 ORTHO05D008641 3.1e-44 182.2 158 72.2
arahy.Tifrunner.gnm1.ann1.TLF144 Arachis hypogaea HOM05D006869 ORTHO05D008641 3.3e-38 162.2 157 59.2
arahy.Tifrunner.gnm1.ann1.4F5UFQ Arachis hypogaea HOM05D006869 ORTHO05D008641 1.6e-37 159.8 157 58.6
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 1.2e-35 153.7 117 69.2
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 1.5e-35 153.3 115 71.3
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 5.8e-35 151.4 112 73.2
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 5.8e-35 151.4 112 73.2
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 5.8e-35 151.4 112 70.5
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 7.6e-35 151.0 112 74.1
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 9.9e-35 150.6 114 71.9
Manes.15G174500 Manihot esculenta HOM05D006869 ORTHO05D008641 2.2e-34 149.4 117 70.9
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 2.9e-34 149.1 100 80.0
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 2.9e-34 149.1 119 68.9
FvH4_5g21430 Fragaria vesca HOM05D006869 ORTHO05D008641 2.9e-34 149.1 113 69.9
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 3.7e-34 148.7 112 71.4
arahy.Tifrunner.gnm1.ann1.U4TMK5 Arachis hypogaea HOM05D006869 ORTHO05D008641 4.9e-34 148.3 144 58.3
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 4.9e-34 148.3 110 71.8
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 4.9e-34 148.3 133 61.7
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 8.4e-34 147.5 118 70.3
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 1.4e-33 146.7 114 71.1
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 3.2e-33 145.6 112 69.6
FAN04G2266 Fragaria x ananassa HOM05D006869 ORTHO05D008641 9.2e-33 144.1 119 67.2
FAN08G2623 Fragaria x ananassa HOM05D006869 ORTHO05D008641 9.2e-33 144.1 119 67.2
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 1.2e-32 143.7 117 65.8
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 1.2e-32 143.7 99 74.7
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 1.6e-32 143.3 117 66.7
FAN18G0870 Fragaria x ananassa HOM05D006869 ORTHO05D008641 2.7e-32 142.5 119 66.4
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 2.7e-32 142.5 112 68.8
GSVIVG01013242001 Vitis vinifera HOM05D006869 ORTHO05D008641 4.6e-32 141.7 107 70.1
Gohir.A09G198300 Gossypium hirsutum HOM05D006869 ORTHO05D008641 6.0e-32 141.4 117 65.8
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 1.0e-31 140.6 106 69.8
CANSAT21G0218 Cannabis sativa HOM05D006869 ORTHO05D008641 1.7e-31 139.8 112 67.0
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 1.7e-31 139.8 104 73.1
Migut.D00490 Erythranthe guttata HOM05D006869 ORTHO05D008641 2.3e-31 139.4 119 65.5
MSTRG.17527 Avicennia marina HOM05D006869 ORTHO05D008641 3.0e-31 139.0 122 63.1
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 3.0e-31 139.0 105 71.4
Nn1g00590 Nelumbo nucifera HOM05D006869 ORTHO05D008641 3.9e-31 138.7 106 70.8
Gohir.D09G192900 Gossypium hirsutum HOM05D006869 ORTHO05D008641 5.1e-31 138.3 117 65.0
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 6.6e-31 137.9 113 67.3
FAN13G1368 Fragaria x ananassa HOM05D006869 ORTHO05D008641 8.6e-31 137.5 111 67.6
PSO732G0001 Papaver somniferum HOM05D006869 ORTHO05D008641 8.6e-31 137.5 94 76.6
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 1.1e-30 137.1 106 70.8
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 9.6e-30 134.0 108 66.7
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 9.6e-30 134.0 108 66.7
Eucgr.E00305 Eucalyptus grandis HOM05D006869 ORTHO05D008641 2.1e-29 132.9 100 70.0
Hma1.2p1_0414F.1_g147870 Hydrangea macrophylla HOM05D006869 ORTHO05D008641 2.1e-29 132.9 94 75.5
Hund14421 Selenicereus undatus HOM05D006869 ORTHO05D008641 2.1e-29 132.9 105 68.6
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 4.7e-29 131.7 112 64.3
ECA233G4479 Erigeron canadensis HOM05D006869 ORTHO05D008641 1.4e-28 130.2 106 64.2
Sabra01G0114100 Salix brachista HOM05D006869 ORTHO05D008641 2.4e-28 129.4 148 52.7
HanXRQChr08g0227941 Helianthus annuus HOM05D006869 ORTHO05D008641 6.8e-28 127.9 109 62.4
Nitab4.5_0003100g0080 Nicotiana tabacum HOM05D006869 ORTHO05D008641 4.4e-27 125.2 134 56.0
THA.LOC104798477 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 4.4e-27 125.2 113 62.8
DCAR_005606 Daucus carota HOM05D006869 ORTHO05D008641 7.6e-27 124.4 126 59.5
Sp1g28510 Schrenkiella parvula HOM05D006869 ORTHO05D008641 1.7e-26 123.2 97 71.1
HPP92_026375 Vanilla planifolia HOM05D006869 ORTHO05D008641 2.2e-26 122.9 110 59.1
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 4.9e-26 121.7 97 71.1
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 4.9e-26 121.7 97 71.1
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 4.9e-26 121.7 97 71.1
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 4.9e-26 121.7 97 71.1
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 4.9e-26 121.7 97 71.1
Actinidia14827 Actinidia chinensis HOM05D006869 ORTHO05D008641 6.4e-26 121.3 86 74.4
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 6.4e-26 121.3 97 70.1
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 6.4e-26 121.3 97 70.1
Gorai.006G215800 Gossypium raimondii HOM05D006869 ORTHO05D008641 6.4e-26 121.3 154 50.0
THA.LOC104798593 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 1.1e-25 120.6 97 66.0
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 2.4e-25 119.4 119 55.5
Thhalv10009100m.g Eutrema salsugineum HOM05D006869 ORTHO05D008641 2.4e-25 119.4 97 69.1
Os02g0279600 Oryza sativa ssp. japonica HOM05D006869 ORTHO05D008641 2.4e-25 119.4 111 64.9
unitig_746.g26748 Utricularia gibba HOM05D006869 ORTHO05D008641 2.4e-25 119.4 101 63.4
AL1G46570 Arabidopsis lyrata HOM05D006869 ORTHO05D008641 3.2e-25 119.0 97 69.1
Carub.0001s3075 Capsella rubella HOM05D006869 ORTHO05D008641 4.2e-25 118.6 97 68.0
CARHR031750 Cardamine hirsuta HOM05D006869 ORTHO05D008641 5.4e-25 118.2 97 69.1
Aa31LG2G13630 Aethionema arabicum HOM05D006869 ORTHO05D008641 7.1e-25 117.9 97 69.1
Zm00001eb024260 Zea mays HOM05D006869 ORTHO05D008641 9.3e-25 117.5 111 62.2
DCAR_024975 Daucus carota HOM05D006869 ORTHO05D008641 4.6e-24 115.2 111 57.7
Oeu015441.1 Olea europaea HOM05D006869 ORTHO05D008641 1.5e-22 110.2 89 65.2
Dinv25192 Davidia involucrata HOM05D006869 ORTHO05D008641 3.3e-22 109.0 122 51.6
THA.LOC104822843 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 5.6e-22 108.2 95 61.1
vmacro14155 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 2.8e-21 105.9 78 67.9
Cc08_g02310 Coffea canephora HOM05D006869 ORTHO05D008641 6.2e-21 104.8 88 61.4
SEGI_28722 Sequoiadendron giganteum HOM05D006869 ORTHO05D008641 6.2e-21 104.8 90 65.6
SGA_v2.0_scaffold94G28479 Striga asiatica HOM05D006869 ORTHO05D008641 6.2e-21 104.8 85 65.9
Rhsim07G0123600 Rhododendron simsii HOM05D006869 ORTHO05D008641 2.4e-20 102.8 81 65.4
Sed0006536 Sechium edule HOM05D006869 ORTHO05D008641 2.4e-20 102.8 93 60.2
Peaxi162Scf00497g00098 Petunia axillaris HOM05D006869 ORTHO05D008641 1.2e-19 100.5 75 70.7
Nitab4.5_0004658g0060 Nicotiana tabacum HOM05D006869 ORTHO05D008641 2.0e-19 99.8 79 67.1
Lsat_1_v5_gn_6_67180 Lactuca sativa HOM05D006869 ORTHO05D008641 7.6e-19 97.8 80 65.0
MBI04_g13865_MAGBIO Magnolia biondii HOM05D006869 ORTHO05D008641 9.9e-19 97.4 83 61.4
Psat1g009440 Pisum sativum HOM05D006869 ORTHO05D008641 1.3e-18 97.1 96 61.5
EL10Ac5g12174 Beta vulgaris HOM05D006869 ORTHO05D008641 2.2e-18 96.3 74 66.2
SalBow6G5905 Salvia bowleyana HOM05D006869 ORTHO05D008641 6.4e-18 94.7 78 62.8
ATR0049G078 Amborella trichopoda HOM05D006869 ORTHO05D008641 1.9e-17 93.2 74 66.2
Ah.07g200090 Amaranthus hybridus HOM05D006869 ORTHO05D008641 3.2e-17 92.4 68 69.1
BcaC05g27873 Brassica carinata HOM05D006869 ORTHO05D008641 7.3e-14 81.3 102 54.9
C05p38760 Brassica napus HOM05D006869 ORTHO05D008641 7.3e-14 81.3 102 54.9
BolC5t32616H Brassica oleracea HOM05D006869 ORTHO05D008641 1.1e-12 77.4 68 69.1
AagrBONN_evm.TU.Sc2ySwM_228.2858 Anthoceros agrestis HOM05D006869 ORTHO05D008641 4.0e-12 75.5 88 48.9
Haze_08288 Corylus avellana HOM05D006869 ORTHO05D008641 2.0e-11 73.2 45 82.2
vmacro23515 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 7.6e-11 71.2 46 73.9
Mapoly0009s0146 Marchantia polymorpha HOM05D006869 ORTHO05D008641 3.8e-10 68.9 93 41.9
Dinv28924 Davidia involucrata HOM05D002067 ORTHO05D002244 4.9e-10 68.6 83 49.4
PGR142G3578 Punica granatum HOM05D006869 ORTHO05D008641 1.1e-09 67.4 47 66.0
Zm00001eb390630 Zea mays HOM05D006869 ORTHO05D008641 1.1e-09 67.4 52 71.2


User provided reference genes

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