Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G054400 Glycine max HOM05D006835 ORTHO05D008587 1.2e-77 294.3 331 100.0
Glyma.13G141500 Glycine max HOM05D006835 ORTHO05D008587 2.2e-55 220.3 302 97.0
VMungo1309G0603 Vigna mungo HOM05D006835 ORTHO05D008587 1.6e-50 204.1 323 89.5
Phvul.007G148200 Phaseolus vulgaris HOM05D006835 ORTHO05D008587 2.2e-47 193.7 303 92.7
Lj4g0005221 Lotus japonicus HOM05D006835 ORTHO05D008587 1.7e-44 184.1 303 88.8
arahy.Tifrunner.gnm1.ann1.9A9DF4 Arachis hypogaea HOM05D006835 ORTHO05D008587 7.3e-43 178.7 302 89.4
arahy.Tifrunner.gnm1.ann1.B8P5ZC Arachis hypogaea HOM05D006835 ORTHO05D008587 7.3e-43 178.7 302 89.4
arahy.Tifrunner.gnm1.ann1.N15UBW Arachis hypogaea HOM05D006835 ORTHO05D008587 7.3e-43 178.7 302 89.4
Lalb_Chr09g0328551 Lupinus albus HOM05D006835 ORTHO05D008587 2.8e-42 176.8 302 85.1
arahy.Tifrunner.gnm1.ann1.ATV9YP Arachis hypogaea HOM05D006835 ORTHO05D008587 8.0e-42 175.3 302 89.1
Psat7g128400 Pisum sativum HOM05D006835 ORTHO05D008587 2.9e-39 166.8 302 82.8
TPR.G31217 Trifolium pratense HOM05D006835 ORTHO05D008587 2.9e-39 166.8 302 76.5
Ca_18740_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 4.9e-39 166.0 302 86.1
Ca_30877_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 4.9e-39 166.0 302 86.1
Gohir.A13G063900 Gossypium hirsutum HOM05D006835 ORTHO05D008587 1.2e-37 161.4 302 84.4
Gorai.013G065400 Gossypium raimondii HOM05D006835 ORTHO05D008587 7.8e-37 158.7 302 84.4
Gohir.D13G058000 Gossypium hirsutum HOM05D006835 ORTHO05D008587 1.5e-35 154.5 302 83.8
Duzib132G0412 Durio zibethinus HOM05D006835 ORTHO05D008587 4.3e-35 152.9 302 80.1
Thecc.02G149200 Theobroma cacao HOM05D006835 ORTHO05D008587 9.5e-35 151.8 302 82.8
Haze_01949 Corylus avellana HOM05D006835 ORTHO05D008587 1.2e-34 151.4 303 80.2
Medtr4g084630 Medicago truncatula HOM05D006835 ORTHO05D008587 1.2e-34 151.4 295 82.4
Cc05_g09290 Coffea canephora HOM05D006835 ORTHO05D008587 3.6e-34 149.8 302 82.1
QL11p057002 Quercus lobata HOM05D006835 ORTHO05D008587 4.7e-34 149.4 302 81.5
Manes.15G113100 Manihot esculenta HOM05D006835 ORTHO05D008587 6.2e-34 149.1 302 77.2
Dinv41853 Davidia involucrata HOM05D006835 ORTHO05D008587 1.8e-33 147.5 302 69.2
Rhsim12G0002300 Rhododendron simsii HOM05D006835 ORTHO05D008587 6.8e-33 145.6 302 80.5
Sabra04G0141200 Salix brachista HOM05D006835 ORTHO05D008587 8.9e-33 145.2 303 79.9
COL.COLO4_04808 Corchorus olitorius HOM05D006835 ORTHO05D008587 1.2e-32 144.8 302 82.1
Prupe.8G183100 Prunus persica HOM05D006835 ORTHO05D008587 1.5e-32 144.4 299 81.3
CiPaw.06G113200 Carya illinoinensis HOM05D006835 ORTHO05D008587 3.4e-32 143.3 302 64.2
MELO3C015685.2 Cucumis melo HOM05D006835 ORTHO05D008587 2.2e-31 140.6 302 73.5
Cpa.g.sc60.7 Carica papaya HOM05D006835 ORTHO05D008587 2.9e-31 140.2 302 81.8
Potri.004G209400 Populus trichocarpa HOM05D006835 ORTHO05D008587 2.9e-31 140.2 300 78.3
CsaV3_7G002240 Cucumis sativus L. HOM05D006835 ORTHO05D008587 4.9e-31 139.4 302 72.8
Actinidia17982 Actinidia chinensis HOM05D006835 ORTHO05D008587 6.4e-31 139.0 302 80.1
Peaxi162Scf00078g00114 Petunia axillaris HOM05D006835 ORTHO05D008587 6.4e-31 139.0 297 80.5
ClCG02G003170 Citrullus lanatus HOM05D006835 ORTHO05D008587 1.1e-30 138.3 302 75.5
CANSAT25G1616 Cannabis sativa HOM05D006835 ORTHO05D008587 1.4e-30 137.9 297 79.8
CANSAT25G2962 Cannabis sativa HOM05D006835 ORTHO05D008587 1.4e-30 137.9 298 79.5
Hma1.2p1_0332F.1_g127850 Hydrangea macrophylla HOM05D006835 ORTHO05D008587 5.4e-30 136.0 297 82.5
Sed0026152 Sechium edule HOM05D006835 ORTHO05D008587 1.6e-29 134.4 302 74.5
GSVIVG01023845001 Vitis vinifera HOM05D006835 ORTHO05D008587 2.1e-29 134.0 86 73.3
FAN27G3385 Fragaria x ananassa HOM05D006835 ORTHO05D008587 2.7e-29 133.7 299 78.6
MBI15_g25631_MAGBIO Magnolia biondii HOM05D006835 ORTHO05D008587 2.7e-29 133.7 297 74.7
Ah.01g010510 Amaranthus hybridus HOM05D006835 ORTHO05D008587 4.6e-29 132.9 297 80.8
FAN24G3450 Fragaria x ananassa HOM05D006835 ORTHO05D008587 4.6e-29 132.9 303 78.2
Potri.009G170300 Populus trichocarpa HOM05D006835 ORTHO05D008587 4.6e-29 132.9 296 81.1
RcHm_v2.0_Chr6g0281661 Rosa chinensis HOM05D006835 ORTHO05D008587 6.0e-29 132.5 299 78.6
Nitab4.5_0000079g0110 Nicotiana tabacum HOM05D006835 ORTHO05D008587 1.0e-28 131.7 86 70.9
Nitab4.5_0004387g0030 Nicotiana tabacum HOM05D006835 ORTHO05D008587 1.0e-28 131.7 86 70.9
Sopen11g019950 Solanum pennellii HOM05D006835 ORTHO05D008587 1.3e-28 131.3 86 70.9
PGSC0003DMG400023133 Solanum tuberosum HOM05D006835 ORTHO05D008587 1.3e-28 131.3 86 70.9
CAN.G430.3 Capsicum annuum HOM05D006835 ORTHO05D008587 1.7e-28 131.0 297 79.5
MD10G1144800 Malus domestica HOM05D006835 ORTHO05D008587 2.3e-28 130.6 290 81.0
Sed0006636 Sechium edule HOM05D006835 ORTHO05D008587 3.9e-28 129.8 302 71.9
Eucgr.H05012 Eucalyptus grandis HOM05D006835 ORTHO05D008587 8.6e-28 128.6 86 68.6
FvH4_2g17170 Fragaria vesca HOM05D006835 ORTHO05D008587 8.6e-28 128.6 290 80.0
PGR042G3426 Punica granatum HOM05D006835 ORTHO05D008587 1.5e-27 127.9 301 72.4
Sc08g0001990 Simmondsia chinensis HOM05D006835 ORTHO05D008587 1.5e-27 127.9 297 76.1
EL10Ac9g21569 Beta vulgaris HOM05D006835 ORTHO05D008587 1.9e-27 127.5 297 77.1
TWI75G0734 Tripterygium wilfordii HOM05D006835 ORTHO05D008587 4.3e-27 126.3 302 78.5
Atru.chr5.3592 Acer truncatum HOM05D006835 ORTHO05D008587 5.6e-27 125.9 86 64.0
Ciclev10028825m.g Citrus clementina HOM05D006835 ORTHO05D008587 5.6e-27 125.9 302 76.2
Oeu034382.1 Olea europaea HOM05D006835 ORTHO05D008587 5.6e-27 125.9 295 77.6
Hund06347 Selenicereus undatus HOM05D006835 ORTHO05D008587 7.3e-27 125.6 297 76.8
Lsat_1_v5_gn_1_20201 Lactuca sativa HOM05D006835 ORTHO05D008587 9.5e-27 125.2 297 77.1
AUR62013212 Chenopodium quinoa HOM05D006835 ORTHO05D008587 3.6e-26 123.2 298 76.8
unitig_744.g24691 Utricularia gibba HOM05D006835 ORTHO05D008587 3.6e-26 123.2 297 77.8
Solyc11g044360.3 Solanum lycopersicum HOM05D006835 ORTHO05D008587 4.7e-26 122.9 74 74.3
AUR62010216 Chenopodium quinoa HOM05D006835 ORTHO05D008587 6.2e-26 122.5 298 76.8
Migut.E01343 Erythranthe guttata HOM05D006835 ORTHO05D008587 8.1e-26 122.1 78 69.2
ECA247G0195 Erigeron canadensis HOM05D006835 ORTHO05D008587 3.1e-25 120.2 297 75.8
MSTRG.1776 Avicennia marina HOM05D006835 ORTHO05D008587 8.9e-25 118.6 83 63.9
Nn6g31561 Nelumbo nucifera HOM05D006835 ORTHO05D008587 8.9e-25 118.6 86 64.0
TAR381G0995 Trochodendron aralioides HOM05D006835 ORTHO05D008587 8.9e-25 118.6 86 67.4
TPR.G38303 Trifolium pratense HOM05D006835 ORTHO05D008587 1.5e-24 117.9 303 75.2
SalBow8G5127 Salvia bowleyana HOM05D006835 ORTHO05D008587 2.6e-24 117.1 289 75.1
Ah.02g121760 Amaranthus hybridus HOM05D006835 ORTHO05D008587 4.4e-24 116.3 86 58.1
Aqoxy6G03057 Aquilegia oxysepala HOM05D006835 ORTHO05D008587 4.4e-24 116.3 298 77.2
CARHR293940 Cardamine hirsuta HOM05D006835 ORTHO05D008587 7.6e-24 115.5 86 64.0
Aa31LG6G16920 Aethionema arabicum HOM05D006835 ORTHO05D008587 6.4e-23 112.5 89 58.4
FAN15G1646 Fragaria x ananassa HOM05D006835 ORTHO05D008587 1.9e-22 110.9 76 65.8
SGA_v2.0_scaffold144G35876 Striga asiatica HOM05D006835 ORTHO05D008587 1.9e-22 110.9 82 57.3
PSO541G0957 Papaver somniferum HOM05D006835 ORTHO05D008587 2.4e-22 110.5 94 56.4
DCAR_006210 Daucus carota HOM05D006835 ORTHO05D008587 5.4e-22 109.4 88 56.8
Sp7g37590 Schrenkiella parvula HOM05D006835 ORTHO05D008587 5.4e-22 109.4 87 60.9
AL7G10060 Arabidopsis lyrata HOM05D006835 ORTHO05D008587 9.2e-22 108.6 87 60.9
AT4G38160 Arabidopsis thaliana HOM05D006835 ORTHO05D008587 2.1e-21 107.5 87 60.9
Carub.0007s0005 Capsella rubella HOM05D006835 ORTHO05D008587 2.1e-21 107.5 87 60.9
Thhalv10004546m.g Eutrema salsugineum HOM05D006835 ORTHO05D008587 2.1e-21 107.5 87 60.9
Atru.BG.81.p Acer truncatum HOM05D006835 ORTHO05D008587 6.0e-21 105.9 71 64.8
ATR0605G237 Amborella trichopoda HOM05D006835 ORTHO05D008587 7.8e-21 105.5 293 68.6
THA.LOC104806593 Tarenaya hassleriana HOM05D006835 ORTHO05D008587 1.1e-19 101.7 303 42.6
ClCG02G010730 Citrullus lanatus HOM05D006835 ORTHO05D008587 1.5e-19 101.3 86 52.3
Lsat_1_v5_gn_8_70721 Lactuca sativa HOM05D006835 ORTHO05D008587 1.4e-17 94.7 68 57.4
BraA03t13979Z Brassica rapa HOM05D006835 ORTHO05D008587 5.2e-17 92.8 89 51.7
C07p46880 Brassica napus HOM05D006835 ORTHO05D008587 6.9e-17 92.4 89 51.7
BolC7t45204H Brassica oleracea HOM05D006835 ORTHO05D008587 6.9e-17 92.4 89 51.7
A03p48790 Brassica napus HOM05D006835 ORTHO05D008587 1.5e-16 91.3 84 52.4
vmacro17000 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 3.8e-15 86.7 86 51.2
MD05G1145000 Malus domestica HOM05D006835 ORTHO05D008587 8.4e-15 85.5 276 77.2
SalBow8G1833 Salvia bowleyana HOM05D006835 ORTHO05D008587 8.4e-15 85.5 56 62.5
CDE04G0383 Ceratophyllum demersum HOM05D006835 ORTHO05D008587 7.1e-14 82.4 82 48.8
Os08g0515800 Oryza sativa ssp. japonica HOM05D006835 ORTHO05D008587 2.3e-12 77.4 82 45.1
CSS0014591 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 5.3e-09 66.2 252 79.4
AagrBONN_evm.TU.Sc2ySwM_344.3279 Anthoceros agrestis HOM05D006835 ORTHO05D008587 4.9e-07 59.7 73 39.7
Mapoly0015s0200 Marchantia polymorpha HOM05D006835 ORTHO05D008587 4.9e-07 59.7 83 37.3
SalBow3G3248 Salvia bowleyana HOM05D006835 ORTHO05D008587 3.2e-06 57.0 248 77.0


User provided reference genes

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