Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G045300 Glycine max HOM05D006719 ORTHO05D007063 7.1e-35 151.0 144 100.0
Glyma.15G147300 Glycine max HOM05D006719 ORTHO05D007063 1.4e-30 136.7 144 91.7
Phvul.009G247500 Phaseolus vulgaris HOM05D006719 ORTHO05D007063 1.3e-25 120.2 139 85.6
VMungo1309G0351 Vigna mungo HOM05D006719 ORTHO05D007063 8.7e-25 117.5 144 71.5
Lalb_Chr15g0083521 Lupinus albus HOM05D006719 ORTHO05D007063 8.4e-20 100.9 148 79.1
Lj6g0006694 Lotus japonicus HOM05D006719 ORTHO05D007063 3.2e-19 99.0 148 81.1
Psat1g153440 Pisum sativum HOM05D006719 ORTHO05D007063 5.4e-19 98.2 145 76.6
Ca_01942_v3 Cicer arietinum L. HOM05D006719 ORTHO05D007063 1.3e-17 93.6 132 83.3
Medtr2g436860 Medicago truncatula HOM05D006719 ORTHO05D007063 1.6e-15 86.7 146 79.5
TPR.G425 Trifolium pratense HOM05D006719 ORTHO05D007063 6.2e-15 84.7 132 85.6
Cfa015380 Carpinus fangiana HOM05D006719 ORTHO05D007063 2.9e-12 75.9 143 39.9
arahy.Tifrunner.gnm1.ann1.WNX5DB Arachis hypogaea HOM05D006719 ORTHO05D007063 4.2e-11 72.0 141 75.2
arahy.Tifrunner.gnm1.ann1.XR1IK3 Arachis hypogaea HOM05D006719 ORTHO05D007063 5.1e-09 65.1 142 72.5
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla HOM05D006719 ORTHO05D007063 5.1e-09 65.1 137 66.4
GSVIVG01017752001 Vitis vinifera HOM05D006719 ORTHO05D007063 5.1e-09 65.1 155 68.4
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 6.7e-09 64.7 151 59.6
CSS0008404 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 8.7e-09 64.3 146 56.8
CSS0019267 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 8.7e-09 64.3 146 56.8
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 1.9e-08 63.2 138 65.2
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 2.5e-08 62.8 138 65.2
Prupe.1G137900 Prunus persica HOM05D006719 ORTHO05D007063 2.5e-08 62.8 133 64.7
MD13G1169300 Malus domestica HOM05D006719 ORTHO05D007063 4.3e-08 62.0 130 63.1
MD16G1170500 Malus domestica HOM05D006719 ORTHO05D007063 4.3e-08 62.0 130 67.7
ClCG05G006040 Citrullus lanatus HOM05D006719 ORTHO05D007063 5.6e-08 61.6 131 76.3
Actinidia40259 Actinidia chinensis HOM05D006719 ORTHO05D007063 7.4e-08 61.2 139 68.3
Dinv44385 Davidia involucrata HOM05D006719 ORTHO05D007063 9.6e-08 60.8 154 63.6
Duzib212G0625 Durio zibethinus HOM05D006719 ORTHO05D007063 9.6e-08 60.8 132 62.1
CiPaw.02G083300 Carya illinoinensis HOM05D006719 ORTHO05D007063 1.3e-07 60.5 126 72.2
Manes.03G194500 Manihot esculenta HOM05D006719 ORTHO05D007063 1.3e-07 60.5 148 64.9
TWI09G1121 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 1.3e-07 60.5 153 66.7
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 1.6e-07 60.1 108 73.1
Gohir.A10G163700 Gossypium hirsutum HOM05D006719 ORTHO05D007063 2.1e-07 59.7 151 60.9
Gorai.006G263400 Gossypium raimondii HOM05D006719 ORTHO05D007063 2.1e-07 59.7 138 55.8
vmacro08144 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 2.1e-07 59.7 151 62.9
vmacro22972 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 2.1e-07 59.7 151 62.9
MELO3C006659.2 Cucumis melo HOM05D006719 ORTHO05D007063 2.8e-07 59.3 47 72.3
CsaV3_3G014580 Cucumis sativus L. HOM05D006719 ORTHO05D007063 2.8e-07 59.3 47 72.3
Nn4g25876 Nelumbo nucifera HOM05D006719 ORTHO05D007063 2.8e-07 59.3 132 56.8
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 3.7e-07 58.9 135 60.0
Potri.008G207500 Populus trichocarpa HOM05D006719 ORTHO05D007063 3.7e-07 58.9 126 61.9
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 3.7e-07 58.9 148 63.5
ECA233G1326 Erigeron canadensis HOM05D006719 ORTHO05D007063 4.8e-07 58.5 111 73.0
MSTRG.21797 Avicennia marina HOM05D006719 ORTHO05D007063 6.2e-07 58.2 140 52.1
Duzib151G0940 Durio zibethinus HOM05D006719 ORTHO05D007063 8.1e-07 57.8 150 56.0
Nn3g21430 Nelumbo nucifera HOM05D006719 ORTHO05D007063 8.1e-07 57.8 151 63.6
CiPaw.01G149100 Carya illinoinensis HOM05D006719 ORTHO05D007063 1.1e-06 57.4 152 36.2
TWI53G1176 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 1.1e-06 57.4 152 69.1
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 1.8e-06 56.6 150 60.7
Sopen01g028510 Solanum pennellii HOM05D006719 ORTHO05D007063 1.8e-06 56.6 151 62.3
Atru.chr4.2828 Acer truncatum HOM05D006719 ORTHO05D007063 2.4e-06 56.2 150 62.0
Peaxi162Scf00024g00041 Petunia axillaris HOM05D006719 ORTHO05D007063 2.4e-06 56.2 130 63.8
Solyc01g066900.4 Solanum lycopersicum HOM05D006719 ORTHO05D007063 3.1e-06 55.8 151 59.6
Dinv29768 Davidia involucrata HOM05D001303 ORTHO05D001129 5.3e-06 55.1 133 60.2
Manes.15G012900 Manihot esculenta HOM05D006719 ORTHO05D007063 5.3e-06 55.1 152 64.5
Oeu037752.1 Olea europaea HOM05D006719 ORTHO05D007063 6.9e-06 54.7 146 62.3
CANSAT78G1100 Cannabis sativa HOM05D006719 ORTHO05D007063 9.0e-06 54.3 40 72.5


User provided reference genes

Program Settings