Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 2.6e-71 271.9 134 100.0
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 2.0e-39 166.0 113 71.7
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 3.2e-37 158.7 134 62.7
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 7.0e-37 157.5 134 61.2
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 6.6e-35 151.0 115 67.0
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 6.6e-35 151.0 115 67.0
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 5.6e-34 147.9 113 64.6
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 9.5e-34 147.1 132 56.1
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 6.2e-33 144.4 120 60.8
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 6.8e-32 141.0 132 57.6
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 6.8e-32 141.0 131 53.4
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 1.2e-31 140.2 115 57.4
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 2.0e-31 139.4 112 60.7
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 2.6e-31 139.0 132 53.0
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 2.6e-31 139.0 130 53.1
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 2.6e-31 139.0 132 53.8
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 3.4e-31 138.7 113 60.2
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 4.4e-31 138.3 132 53.0
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 4.4e-31 138.3 132 52.3
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 4.4e-31 138.3 130 53.1
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 7.5e-31 137.5 132 52.3
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 7.5e-31 137.5 114 55.3
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 9.8e-31 137.1 88 72.7
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 1.7e-30 136.3 130 52.3
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 2.2e-30 136.0 108 62.0
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 2.9e-30 135.6 112 58.0
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 2.9e-30 135.6 131 51.1
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 8.3e-30 134.0 108 62.0
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 1.1e-29 133.7 132 50.0
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 1.4e-29 133.3 132 51.5
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 1.9e-29 132.9 112 59.8
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 2.4e-29 132.5 113 54.0
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 2.4e-29 132.5 112 54.5
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 4.1e-29 131.7 121 57.9
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 9.2e-29 130.6 113 59.3
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 1.2e-28 130.2 121 56.2
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 1.6e-28 129.8 112 56.2
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 2.7e-28 129.0 107 57.9
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 2.7e-28 129.0 113 58.4
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 3.5e-28 128.6 112 56.2
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 3.5e-28 128.6 107 58.9
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 3.5e-28 128.6 132 48.5
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 4.6e-28 128.3 108 60.2
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 6.0e-28 127.9 94 62.8
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 6.0e-28 127.9 131 50.4
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 7.8e-28 127.5 112 57.1
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 7.8e-28 127.5 116 52.6
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 7.8e-28 127.5 113 57.5
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 7.8e-28 127.5 132 48.5
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 1.0e-27 127.1 133 49.6
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 1.3e-27 126.7 91 65.9
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 1.3e-27 126.7 131 49.6
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 1.3e-27 126.7 97 67.0
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 2.3e-27 125.9 131 48.1
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 2.3e-27 125.9 114 52.6
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 3.0e-27 125.6 114 51.8
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 3.9e-27 125.2 112 55.4
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 3.9e-27 125.2 131 48.9
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 3.9e-27 125.2 114 55.3
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 5.0e-27 124.8 108 55.6
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 6.6e-27 124.4 92 64.1
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 1.9e-26 122.9 112 53.6
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 2.5e-26 122.5 113 54.0
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 2.5e-26 122.5 114 51.8
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 2.5e-26 122.5 113 51.3
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 3.3e-26 122.1 91 63.7
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 4.3e-26 121.7 112 55.4
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 7.3e-26 120.9 131 45.0
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 9.5e-26 120.6 126 46.8
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 1.6e-25 119.8 112 52.7
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 1.6e-25 119.8 112 52.7
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 1.6e-25 119.8 112 52.7
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 1.6e-25 119.8 112 52.7
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 1.6e-25 119.8 88 64.8
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 2.1e-25 119.4 91 62.6
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 2.1e-25 119.4 112 52.7
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 2.1e-25 119.4 91 61.5
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 2.8e-25 119.0 91 62.6
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 2.8e-25 119.0 112 51.8
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 3.6e-25 118.6 112 52.7
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 3.6e-25 118.6 108 56.5
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 4.7e-25 118.2 112 52.7
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 6.2e-25 117.9 112 50.9
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 1.1e-24 117.1 112 51.8
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 1.1e-24 117.1 112 51.8
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 2.3e-24 115.9 88 62.5
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 4.0e-24 115.2 107 54.2
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 6.8e-24 114.4 112 50.9
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 8.9e-24 114.0 113 49.6
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 1.2e-23 113.6 112 46.4
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 2.0e-23 112.8 112 50.0
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 3.4e-23 112.1 70 75.7
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 5.8e-23 111.3 131 45.8
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 9.8e-23 110.5 131 45.0
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 9.8e-23 110.5 112 49.1
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 2.9e-22 109.0 113 46.9
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 4.9e-22 108.2 112 45.5
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 6.4e-22 107.8 107 51.4
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 6.4e-22 107.8 92 56.5
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 4.1e-21 105.1 83 60.2
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 9.2e-21 104.0 123 46.3
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 7.8e-20 100.9 130 40.8
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 1.7e-19 99.8 94 53.2
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 6.6e-19 97.8 73 61.6
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 1.9e-18 96.3 70 64.3
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 1.9e-18 96.3 74 62.2
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 3.3e-18 95.5 92 51.1
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 7.3e-18 94.4 90 57.8
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 1.1e-16 90.5 91 54.9
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 3.1e-16 89.0 82 51.2
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 3.1e-16 89.0 134 39.6
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 5.8e-15 84.7 114 41.2
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 1.7e-14 83.2 91 50.5
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 3.7e-14 82.0 107 35.5
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 1.9e-13 79.7 77 58.4
CANSAT54G0480 Cannabis sativa HOM05D006322 ORTHO05D007716 1.2e-12 77.0 67 52.2
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 2.1e-12 76.3 75 50.7
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 2.7e-12 75.9 115 33.9
EL10Ac1g02106 Beta vulgaris HOM05D006322 ORTHO05D007716 1.7e-11 73.2 64 59.4
BcaB04g18920 Brassica carinata HOM05D006322 ORTHO05D007716 8.6e-11 70.9 74 47.3
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 8.6e-11 70.9 76 44.7
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 2.8e-09 65.9 89 43.8
Cre09.g407600 Chlamydomonas reinhardtii HOM05D006322 ORTHO05D007716 8.9e-08 60.8 80 36.2


User provided reference genes

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