Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G149800 Glycine max HOM05D006880 ORTHO05D008638 3.7e-123 444.9 225 100.0
Glyma.09G116700 Glycine max HOM05D006880 ORTHO05D008638 4.9e-91 338.2 192 90.1
Glyma.09G116500 Glycine max HOM05D006880 ORTHO05D008638 7.8e-89 330.9 192 88.5
Lalb_Chr08g0238661 Lupinus albus HOM05D006880 ORTHO05D008638 1.5e-84 316.6 193 84.5
QL06p051802 Quercus lobata HOM05D006880 ORTHO05D008638 4.4e-84 315.1 193 83.4
Phvul.009G147400 Phaseolus vulgaris HOM05D006880 ORTHO05D008638 1.3e-83 313.5 203 84.7
TPR.G18722 Trifolium pratense HOM05D006880 ORTHO05D008638 6.4e-83 311.2 196 83.7
CiPaw.03G123600 Carya illinoinensis HOM05D006880 ORTHO05D008638 3.2e-82 308.9 201 79.1
Ca_16914_v3 Cicer arietinum L. HOM05D006880 ORTHO05D008638 7.1e-82 307.8 195 82.1
Medtr3g095480 Medicago truncatula HOM05D006880 ORTHO05D008638 7.1e-82 307.8 198 81.8
Lalb_Chr11g0068241 Lupinus albus HOM05D006880 ORTHO05D008638 9.2e-82 307.4 196 82.1
Psat5g063920 Pisum sativum HOM05D006880 ORTHO05D008638 3.5e-81 305.4 201 80.6
Lj1g0010031 Lotus japonicus HOM05D006880 ORTHO05D008638 7.8e-81 304.3 197 82.7
RcHm_v2.0_Chr2g0119191 Rosa chinensis HOM05D006880 ORTHO05D008638 5.1e-80 301.6 195 79.5
Duzib147G0678 Durio zibethinus HOM05D006880 ORTHO05D008638 6.6e-80 301.2 198 79.3
Prupe.6G162500 Prunus persica HOM05D006880 ORTHO05D008638 6.6e-80 301.2 194 79.4
ClCG01G015680 Citrullus lanatus HOM05D006880 ORTHO05D008638 1.1e-79 300.4 191 79.1
FvH4_1g23610 Fragaria vesca HOM05D006880 ORTHO05D008638 1.5e-79 300.1 195 78.5
FAN28G1236 Fragaria x ananassa HOM05D006880 ORTHO05D008638 1.5e-79 300.1 195 78.5
FAN19G0460 Fragaria x ananassa HOM05D006880 ORTHO05D008638 5.6e-79 298.1 192 78.1
FAN23G3120 Fragaria x ananassa HOM05D006880 ORTHO05D008638 7.3e-79 297.7 195 77.4
FAN26G3452 Fragaria x ananassa HOM05D006880 ORTHO05D008638 7.3e-79 297.7 195 77.9
Potri.019G006500 Populus trichocarpa HOM05D006880 ORTHO05D008638 1.2e-78 297.0 196 78.1
Oeu054906.1 Olea europaea HOM05D006880 ORTHO05D008638 2.8e-78 295.8 200 78.0
CANSAT01G0776 Cannabis sativa HOM05D006880 ORTHO05D008638 3.6e-78 295.4 197 78.7
CiPaw.04G083800 Carya illinoinensis HOM05D006880 ORTHO05D008638 6.2e-78 294.7 196 76.5
Gohir.A10G083300 Gossypium hirsutum HOM05D006880 ORTHO05D008638 8.1e-78 294.3 192 79.7
Gohir.D10G105600 Gossypium hirsutum HOM05D006880 ORTHO05D008638 8.1e-78 294.3 192 79.7
Gorai.011G115200 Gossypium raimondii HOM05D006880 ORTHO05D008638 8.1e-78 294.3 192 79.7
TWI79G0189 Tripterygium wilfordii HOM05D006880 ORTHO05D008638 1.4e-77 293.5 196 78.6
Cpa.g.sc453.1 Carica papaya HOM05D006880 ORTHO05D008638 1.8e-77 293.1 200 76.5
Sabra16G0194800 Salix brachista HOM05D006880 ORTHO05D008638 2.3e-77 292.7 204 74.5
Thecc.01G120600 Theobroma cacao HOM05D006880 ORTHO05D008638 2.3e-77 292.7 203 76.8
Sabra19G0018800 Salix brachista HOM05D006880 ORTHO05D008638 4.0e-77 292.0 195 76.4
MELO3C008029.2 Cucumis melo HOM05D006880 ORTHO05D008638 5.2e-77 291.6 191 78.0
Potri.001G309000 Populus trichocarpa HOM05D006880 ORTHO05D008638 5.2e-77 291.6 206 73.8
Duzib187G0911 Durio zibethinus HOM05D006880 ORTHO05D008638 6.8e-77 291.2 196 77.6
Sabra19G0023300 Salix brachista HOM05D006880 ORTHO05D008638 1.2e-76 290.4 197 76.1
COL.COLO4_22415 Corchorus olitorius HOM05D006880 ORTHO05D008638 1.5e-76 290.0 199 76.9
Actinidia06675 Actinidia chinensis HOM05D006880 ORTHO05D008638 5.8e-76 288.1 196 76.5
arahy.Tifrunner.gnm1.ann1.91R8ME Arachis hypogaea HOM05D006880 ORTHO05D008638 1.7e-75 286.6 193 77.7
Ciclev10026534m.g Citrus clementina HOM05D006880 ORTHO05D008638 1.7e-75 286.6 199 76.4
Manes.12G148400 Manihot esculenta HOM05D006880 ORTHO05D008638 2.2e-75 286.2 205 74.6
Cc07_g17330 Coffea canephora HOM05D006880 ORTHO05D008638 4.9e-75 285.0 198 73.7
Gorai.002G151100 Gossypium raimondii HOM05D006880 ORTHO05D008638 6.4e-75 284.6 200 74.5
HanXRQChr02g0039401 Helianthus annuus HOM05D006880 ORTHO05D008638 8.4e-75 284.3 192 74.5
ECA247G1470 Erigeron canadensis HOM05D006880 ORTHO05D008638 2.4e-74 282.7 193 74.6
SGA_v2.0_scaffold178G39501 Striga asiatica HOM05D006880 ORTHO05D008638 3.2e-74 282.3 179 80.4
Solyc11g005390.3 Solanum lycopersicum HOM05D006880 ORTHO05D008638 4.1e-74 282.0 196 73.5
Sopen11g001400 Solanum pennellii HOM05D006880 ORTHO05D008638 4.1e-74 282.0 196 73.5
Hma1.2p1_0006F.1_g004965 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 5.4e-74 281.6 200 74.0
Hma1.2p1_0025F.1_g016260 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 5.4e-74 281.6 200 74.0
Hma1.2p1_1667F.1_g296585 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 5.4e-74 281.6 200 74.0
PSO675G8574 Papaver somniferum HOM05D006880 ORTHO05D008638 1.6e-73 280.0 195 75.9
arahy.Tifrunner.gnm1.ann1.546D2B Arachis hypogaea HOM05D006880 ORTHO05D008638 2.1e-73 279.6 193 76.7
Atru.chr4.544 Acer truncatum HOM05D006880 ORTHO05D008638 6.0e-73 278.1 200 73.0
PSO541G1054 Papaver somniferum HOM05D006880 ORTHO05D008638 7.8e-73 277.7 195 75.4
Aqoxy5G02095 Aquilegia oxysepala HOM05D006880 ORTHO05D008638 1.0e-72 277.3 191 75.9
MD01G1016600 Malus domestica HOM05D006880 ORTHO05D008638 1.3e-72 276.9 179 78.8
PGSC0003DMG400003965 Solanum tuberosum HOM05D006880 ORTHO05D008638 1.7e-72 276.6 196 71.9
Nn1g06089 Nelumbo nucifera HOM05D006880 ORTHO05D008638 6.6e-72 274.6 194 74.7
GSVIVG01026589001 Vitis vinifera HOM05D006880 ORTHO05D008638 1.9e-71 273.1 172 80.2
Migut.H01108 Erythranthe guttata HOM05D006880 ORTHO05D008638 3.3e-71 272.3 183 76.5
TAR628G0678 Trochodendron aralioides HOM05D006880 ORTHO05D008638 9.6e-71 270.8 194 71.6
Lj2A591T43 Lonicera japonica HOM05D006880 ORTHO05D008638 6.2e-70 268.1 195 70.3
CSS0034618 Camellia sinensis var. sinensis HOM05D006880 ORTHO05D008638 1.1e-69 267.3 193 74.1
HanXRQChr05g0137731 Helianthus annuus HOM05D006880 ORTHO05D008638 4.4e-68 261.9 192 70.8
AUR62017937 Chenopodium quinoa HOM05D006880 ORTHO05D008638 5.8e-68 261.5 205 68.3
CDE08G0745 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 1.7e-67 260.0 192 69.8
Aa31LG8G5640 Aethionema arabicum HOM05D006880 ORTHO05D008638 3.8e-67 258.8 201 69.2
Sed0021560 Sechium edule HOM05D006880 ORTHO05D008638 6.4e-67 258.1 191 71.2
AL3G32180 Arabidopsis lyrata HOM05D006880 ORTHO05D008638 8.4e-67 257.7 198 69.7
C05p46720 Brassica napus HOM05D006880 ORTHO05D008638 1.1e-66 257.3 201 69.2
Sp1g36150 Schrenkiella parvula HOM05D006880 ORTHO05D008638 1.1e-66 257.3 199 68.8
BolC5t33399H Brassica oleracea HOM05D006880 ORTHO05D008638 1.4e-66 256.9 203 68.5
Carub.0003s1862 Capsella rubella HOM05D006880 ORTHO05D008638 2.4e-66 256.1 198 69.7
MBI02_g23402_MAGBIO Magnolia biondii HOM05D006880 ORTHO05D008638 3.2e-66 255.8 224 61.2
BcaC02g12236 Brassica carinata HOM05D006880 ORTHO05D008638 5.4e-66 255.0 201 68.7
BcaC05g28570 Brassica carinata HOM05D006880 ORTHO05D008638 5.4e-66 255.0 201 68.7
AT3G18800 Arabidopsis thaliana HOM05D006880 ORTHO05D008638 7.1e-66 254.6 198 69.2
PGR119G1657 Punica granatum HOM05D006880 ORTHO05D008638 7.1e-66 254.6 196 70.9
Sc03g0004730 Simmondsia chinensis HOM05D006880 ORTHO05D008638 2.1e-65 253.1 178 70.8
THA.LOC104821864 Tarenaya hassleriana HOM05D006880 ORTHO05D008638 2.7e-65 252.7 179 73.2
Sp3g16890 Schrenkiella parvula HOM05D006880 ORTHO05D008638 4.6e-65 251.9 205 67.8
BcaB06g25933 Brassica carinata HOM05D006880 ORTHO05D008638 7.8e-65 251.1 202 66.8
Gohir.D11G233000 Gossypium hirsutum HOM05D006880 ORTHO05D008638 2.3e-64 249.6 202 67.3
A05p30800 Brassica napus HOM05D006880 ORTHO05D008638 3.0e-64 249.2 204 66.2
BraA05t21922Z Brassica rapa HOM05D006880 ORTHO05D008638 3.0e-64 249.2 204 66.2
CARHR094210 Cardamine hirsuta HOM05D006880 ORTHO05D008638 5.1e-64 248.4 202 66.8
ATR0772G040 Amborella trichopoda HOM05D006880 ORTHO05D008638 6.6e-64 248.1 195 65.6
HPP92_025026 Vanilla planifolia HOM05D006880 ORTHO05D008638 1.6e-62 243.4 184 67.9
HPP92_025033 Vanilla planifolia HOM05D006880 ORTHO05D008638 1.6e-62 243.4 184 67.9
CsaV3_6G041940 Cucumis sativus L. HOM05D006880 ORTHO05D008638 6.9e-61 238.0 165 73.3
Thhalv10022284m.g Eutrema salsugineum HOM05D006880 ORTHO05D008638 7.6e-60 234.6 204 65.2
Nn5g28731 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.3e-59 233.8 193 65.3
Peaxi162Scf00025g02313 Petunia axillaris HOM05D006880 ORTHO05D008638 3.8e-59 232.3 181 68.0
Dinv09943 Davidia involucrata HOM05D006880 ORTHO05D008638 3.2e-58 229.2 174 70.1
CDE06G1704 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 1.5e-52 210.3 161 67.7
BcaC07g37070 Brassica carinata HOM05D006880 ORTHO05D008638 1.1e-50 204.1 198 58.6
Mapoly0012s0135 Marchantia polymorpha HOM05D006880 ORTHO05D008638 2.1e-46 189.9 179 55.3
A08p04110 Brassica napus HOM05D006880 ORTHO05D008638 2.8e-46 189.5 144 67.4
SMO351G0309 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 1.7e-43 180.3 178 51.7
AagrBONN_evm.TU.Sc2ySwM_228.250 Anthoceros agrestis HOM05D006880 ORTHO05D008638 1.0e-40 171.0 177 50.8
SMO196G0105 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 1.9e-39 166.8 179 47.5
Nn3g21133 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.3e-38 164.1 190 51.6
Nitab4.5_0011433g0020 Nicotiana tabacum HOM05D006880 ORTHO05D008638 1.6e-38 163.7 111 71.2
Nitab4.5_0023130g0010 Nicotiana tabacum HOM05D006880 ORTHO05D008638 3.1e-37 159.5 111 69.4
DCAR_016722 Daucus carota HOM05D006880 ORTHO05D008638 2.3e-32 143.3 104 70.2
Os04g0687200 Oryza sativa ssp. japonica HOM05D006880 ORTHO05D008638 2.4e-29 133.3 125 54.4
Nn8g40983 Nelumbo nucifera HOM05D006880 ORTHO05D008638 9.0e-29 131.3 190 46.3
Eucgr.B01306 Eucalyptus grandis HOM05D006880 ORTHO05D008638 1.7e-22 110.5 131 48.9
Lj6g0028046 Lotus japonicus HOM05D006880 ORTHO05D008638 5.0e-19 99.0 65 75.4
Nn3g19205 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.3e-11 74.3 71 60.6
Eucgr.B00961 Eucalyptus grandis HOM05D006880 ORTHO05D008638 1.7e-11 73.9 76 52.6
BraA08t32436Z Brassica rapa HOM05D006880 ORTHO05D008638 8.5e-11 71.6 56 67.9


User provided reference genes

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