Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G074500 Glycine max HOM05D007649 ORTHO05D009668 7.7e-40 166.8 89 100.0
Glyma.04G073400 Glycine max HOM05D007649 ORTHO05D009668 4.4e-35 151.0 89 89.9
Phvul.009G099200 Phaseolus vulgaris HOM05D007649 ORTHO05D009668 3.8e-31 137.9 89 80.9
TPR.G12493 Trifolium pratense HOM05D007649 ORTHO05D009668 2.6e-27 125.2 89 74.2
Lj1g0000027 Lotus japonicus HOM05D007649 ORTHO05D009668 3.3e-27 124.8 89 74.2
arahy.Tifrunner.gnm1.ann1.0NF80D Arachis hypogaea HOM05D007649 ORTHO05D009668 9.7e-27 123.2 92 69.6
arahy.Tifrunner.gnm1.ann1.3N1A5Y Arachis hypogaea HOM05D007649 ORTHO05D009668 9.7e-27 123.2 92 69.6
Psat5g025760 Pisum sativum HOM05D007649 ORTHO05D009668 2.8e-26 121.7 90 74.4
Medtr3g108310 Medicago truncatula HOM05D007649 ORTHO05D009668 9.1e-25 116.7 91 71.4
Duzib150G1676 Durio zibethinus HOM05D007649 ORTHO05D009668 1.8e-20 102.4 78 67.9
QL12p031020 Quercus lobata HOM05D007649 ORTHO05D009668 2.0e-19 99.0 77 64.9
Cpa.g.sc205.32 Carica papaya HOM05D007649 ORTHO05D009668 2.2e-18 95.5 83 59.0
Gohir.D07G028200 Gossypium hirsutum HOM05D007649 ORTHO05D009668 2.2e-18 95.5 87 62.1
Gorai.001G029500 Gossypium raimondii HOM05D007649 ORTHO05D009668 2.2e-18 95.5 87 62.1
CANSAT25G0191 Cannabis sativa HOM05D007649 ORTHO05D009668 4.8e-18 94.4 85 55.3
Dinv30235 Davidia involucrata HOM05D007649 ORTHO05D009668 4.8e-18 94.4 84 57.1
Duzib168G0100 Durio zibethinus HOM05D007649 ORTHO05D009668 4.8e-18 94.4 79 62.0
Prupe.1G464700 Prunus persica HOM05D007649 ORTHO05D009668 8.3e-18 93.6 92 55.4
Hund02998 Selenicereus undatus HOM05D007649 ORTHO05D009668 1.1e-17 93.2 86 57.0
GSVIVG01035747001 Vitis vinifera HOM05D007649 ORTHO05D009668 1.1e-17 93.2 78 61.5
Haze_21646 Corylus avellana HOM05D007649 ORTHO05D009668 1.8e-17 92.4 75 65.3
TWI63G0355 Tripterygium wilfordii HOM05D007649 ORTHO05D009668 1.8e-17 92.4 84 56.0
Nitab4.5_0012591g0010 Nicotiana tabacum HOM05D007649 ORTHO05D009668 2.4e-17 92.0 87 51.7
TAR383G0510 Trochodendron aralioides HOM05D007649 ORTHO05D009668 2.4e-17 92.0 78 60.3
CiPaw.08G016800 Carya illinoinensis HOM05D007649 ORTHO05D009668 3.1e-17 91.7 91 54.9
MELO3C003657.2 Cucumis melo HOM05D007649 ORTHO05D009668 3.1e-17 91.7 84 57.1
HanXRQChr10g0313021 Helianthus annuus HOM05D007649 ORTHO05D009668 3.1e-17 91.7 95 55.8
Lsat_1_v5_gn_6_8481 Lactuca sativa HOM05D007649 ORTHO05D009668 7.0e-17 90.5 95 52.6
Nitab4.5_0000250g0070 Nicotiana tabacum HOM05D007649 ORTHO05D009668 1.2e-16 89.7 87 50.6
Sopen08g021900 Solanum pennellii HOM05D007649 ORTHO05D009668 1.2e-16 89.7 87 49.4
PGR044G0128 Punica granatum HOM05D007649 ORTHO05D009668 1.6e-16 89.4 75 60.0
Aa31LG11G4690 Aethionema arabicum HOM05D007649 ORTHO05D009668 2.0e-16 89.0 79 58.2
CsaV3_3G046810 Cucumis sativus L. HOM05D007649 ORTHO05D009668 2.0e-16 89.0 86 53.5
Thhalv10005188m.g Eutrema salsugineum HOM05D007649 ORTHO05D009668 2.0e-16 89.0 79 59.5
Nn2g11782 Nelumbo nucifera HOM05D007649 ORTHO05D009668 2.0e-16 89.0 78 59.0
THA.LOC104799213 Tarenaya hassleriana HOM05D007649 ORTHO05D009668 2.0e-16 89.0 77 61.0
ClCG05G017300 Citrullus lanatus HOM05D007649 ORTHO05D009668 3.5e-16 88.2 86 53.5
ECA233G5733 Erigeron canadensis HOM05D007649 ORTHO05D009668 3.5e-16 88.2 95 52.6
Sc09g0008910 Simmondsia chinensis HOM05D007649 ORTHO05D009668 3.5e-16 88.2 88 52.3
EL10Ac2g02528 Beta vulgaris HOM05D007649 ORTHO05D009668 4.5e-16 87.8 82 54.9
RcHm_v2.0_Chr1g0325561 Rosa chinensis HOM05D007649 ORTHO05D009668 4.5e-16 87.8 75 58.7
Atru.chr7.2308 Acer truncatum HOM05D007649 ORTHO05D009668 7.7e-16 87.0 75 56.0
AL6G37400 Arabidopsis lyrata HOM05D007649 ORTHO05D009668 7.7e-16 87.0 78 59.0
FvH4_7g03290 Fragaria vesca HOM05D007649 ORTHO05D009668 7.7e-16 87.0 80 55.0
CARHR187800 Cardamine hirsuta HOM05D007649 ORTHO05D009668 1.3e-15 86.3 78 59.0
AUR62032390 Chenopodium quinoa HOM05D007649 ORTHO05D009668 1.3e-15 86.3 84 52.4
A06p36270 Brassica napus HOM05D007649 ORTHO05D009668 1.7e-15 85.9 85 55.3
BraA06t26549Z Brassica rapa HOM05D007649 ORTHO05D009668 1.7e-15 85.9 85 55.3
Carub.0006s2344 Capsella rubella HOM05D007649 ORTHO05D009668 1.7e-15 85.9 78 57.7
Cc08_g08160 Coffea canephora HOM05D007649 ORTHO05D009668 2.3e-15 85.5 87 49.4
AT5G25570 Arabidopsis thaliana HOM05D007649 ORTHO05D009668 2.9e-15 85.1 78 57.7
AUR62024825 Chenopodium quinoa HOM05D007649 ORTHO05D009668 2.9e-15 85.1 75 54.7
Migut.N01074 Erythranthe guttata HOM05D007649 ORTHO05D009668 2.9e-15 85.1 87 50.6
Sp2g21960 Schrenkiella parvula HOM05D007649 ORTHO05D009668 2.9e-15 85.1 78 56.4
Peaxi162Scf00105g01010 Petunia axillaris HOM05D007649 ORTHO05D009668 3.8e-15 84.7 78 52.6
Potri.006G245100 Populus trichocarpa HOM05D007649 ORTHO05D009668 3.8e-15 84.7 79 57.0
CAN.G1384.1 Capsicum annuum HOM05D007649 ORTHO05D009668 5.0e-15 84.3 87 48.3
MD08G1134800 Malus domestica HOM05D007649 ORTHO05D009668 6.6e-15 84.0 72 56.9
Aqoxy7G01751 Aquilegia oxysepala HOM05D007649 ORTHO05D009668 1.5e-14 82.8 77 54.5
Manes.16G069200 Manihot esculenta HOM05D007649 ORTHO05D009668 1.9e-14 82.4 88 53.4
SalBow4G3148 Salvia bowleyana HOM05D007649 ORTHO05D009668 1.9e-14 82.4 80 55.0
Actinidia13297 Actinidia chinensis HOM05D007649 ORTHO05D009668 7.2e-14 80.5 85 49.4
PSO063G4106 Papaver somniferum HOM05D007649 ORTHO05D009668 7.2e-14 80.5 73 58.9
Potri.012G125000 Populus trichocarpa HOM05D007649 ORTHO05D009668 7.2e-14 80.5 79 55.7
CDE05G1266 Ceratophyllum demersum HOM05D007649 ORTHO05D009668 9.5e-14 80.1 85 49.4
C02p59430 Brassica napus HOM05D007649 ORTHO05D009668 1.6e-13 79.3 75 54.7
Sed0022915 Sechium edule HOM05D007649 ORTHO05D009668 2.1e-13 79.0 70 54.3
Solyc08g067980.3 Solanum lycopersicum HOM05D007649 ORTHO05D009668 2.8e-13 78.6 98 43.9
Ciclev10010030m.g Citrus clementina HOM05D007649 ORTHO05D009668 4.7e-13 77.8 76 53.9
Eucgr.C02878 Eucalyptus grandis HOM05D007649 ORTHO05D009668 6.1e-13 77.4 64 59.4
Sed0003009 Sechium edule HOM05D007649 ORTHO05D009668 6.1e-13 77.4 72 52.8
BolC7t44754H Brassica oleracea HOM05D007649 ORTHO05D009668 4.0e-12 74.7 64 60.9
Rhsim07G0149600 Rhododendron simsii HOM05D007649 ORTHO05D009668 5.2e-12 74.3 68 51.5
MBI04_g10458_MAGBIO Magnolia biondii HOM05D007649 ORTHO05D009668 6.8e-12 73.9 64 56.2
Oeu033993.1 Olea europaea HOM05D007649 ORTHO05D009668 6.8e-12 73.9 66 57.6
Oeu033995.1 Olea europaea HOM05D007649 ORTHO05D009668 6.8e-12 73.9 66 57.6
FAN10G0583 Fragaria x ananassa HOM05D007649 ORTHO05D009668 8.9e-12 73.6 74 50.0
PGSC0003DMG400014488 Solanum tuberosum HOM05D007649 ORTHO05D009668 2.6e-11 72.0 57 59.6
Ah.12g060320 Amaranthus hybridus HOM05D007649 ORTHO05D009668 4.4e-11 71.2 98 43.9
CSS0042406 Camellia sinensis var. sinensis HOM05D007649 ORTHO05D009668 5.7e-11 70.9 82 46.3
BolC2t12006H Brassica oleracea HOM05D007649 ORTHO05D009668 1.7e-10 69.3 74 51.4
Sabra06G0191900 Salix brachista HOM05D007649 ORTHO05D009668 6.3e-10 67.4 64 54.7
TWI34G1739 Tripterygium wilfordii HOM05D007649 ORTHO05D009668 6.3e-10 67.4 73 54.8
FAN06G3614 Fragaria x ananassa HOM05D007649 ORTHO05D009668 4.1e-09 64.7 55 56.4
ATR0037G059 Amborella trichopoda HOM05D007649 ORTHO05D009668 4.5e-08 61.2 78 41.0
Os05g0180700 Oryza sativa ssp. japonica HOM05D007649 ORTHO05D009668 4.5e-08 61.2 85 37.6
vmacro05350 Vaccinium macrocarpon HOM05D007649 ORTHO05D009668 5.9e-08 60.8 49 57.1
Gohir.A07G024600 Gossypium hirsutum HOM05D007649 ORTHO05D009668 1.7e-07 59.3 73 43.8
FAN03G3370 Fragaria x ananassa HOM05D007649 ORTHO05D009668 5.0e-07 57.8 89 41.6


User provided reference genes

Program Settings