Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G024800 Glycine max HOM05D007355 ORTHO05D009343 2.5e-65 251.9 124 100.0
Glyma.04G024700 Glycine max HOM05D007355 ORTHO05D009343 6.7e-58 227.3 126 92.1
VMungo1309G0669 Vigna mungo HOM05D007355 ORTHO05D009343 2.0e-46 189.1 114 88.6
Phvul.009G016500 Phaseolus vulgaris HOM05D007355 ORTHO05D009343 1.7e-45 186.0 121 83.5
Lj1g0016145 Lotus japonicus HOM05D007355 ORTHO05D009343 5.7e-33 144.4 115 73.9
Lalb_Chr14g0369841 Lupinus albus HOM05D007355 ORTHO05D009343 4.1e-31 138.3 140 57.9
Potri.005G238400 Populus trichocarpa HOM05D007355 ORTHO05D009343 1.7e-29 132.9 117 64.1
QL02p011487 Quercus lobata HOM05D007355 ORTHO05D009343 8.5e-29 130.6 131 58.8
arahy.Tifrunner.gnm1.ann1.Y2NNQI Arachis hypogaea HOM05D007355 ORTHO05D009343 1.9e-28 129.4 92 72.8
arahy.Tifrunner.gnm1.ann1.PADY8Y Arachis hypogaea HOM05D007355 ORTHO05D009343 2.5e-28 129.0 94 72.3
CiPaw.08G065900 Carya illinoinensis HOM05D007355 ORTHO05D009343 3.2e-28 128.6 97 70.1
Sabra05G0184200 Salix brachista HOM05D007355 ORTHO05D009343 5.5e-28 127.9 117 62.4
Thecc.08G043500 Theobroma cacao HOM05D007355 ORTHO05D009343 5.5e-28 127.9 91 70.3
COL.COLO4_26156 Corchorus olitorius HOM05D007355 ORTHO05D009343 2.7e-27 125.6 125 57.6
TAR625G0791 Trochodendron aralioides HOM05D007355 ORTHO05D009343 2.7e-27 125.6 111 63.1
Lj5g0016063 Lotus japonicus HOM05D007355 ORTHO05D009343 8.0e-27 124.0 138 52.9
Ca_13424_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 6.7e-26 120.9 86 73.3
Ca_13425_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 6.7e-26 120.9 86 73.3
Gorai.009G194900 Gossypium raimondii HOM05D007355 ORTHO05D009343 6.7e-26 120.9 117 60.7
Gohir.D06G000500 Gossypium hirsutum HOM05D007355 ORTHO05D009343 8.8e-26 120.6 131 54.2
Gohir.A05G186732 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.1e-25 120.2 117 59.8
Gohir.A06G004700 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.1e-25 120.2 89 71.9
Manes.05G148200 Manihot esculenta HOM05D007355 ORTHO05D009343 1.1e-25 120.2 129 54.3
FAN15G2202 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.5e-25 119.8 126 54.0
FAN27G0012 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.5e-25 119.8 126 54.0
PGR083G2600 Punica granatum HOM05D007355 ORTHO05D009343 2.0e-25 119.4 128 56.2
Gorai.010G004900 Gossypium raimondii HOM05D007355 ORTHO05D009343 4.4e-25 118.2 89 70.8
Gohir.D05G189650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 5.7e-25 117.9 117 59.8
TPR.G26402 Trifolium pratense HOM05D007355 ORTHO05D009343 5.7e-25 117.9 125 57.6
Ciclev10003277m.g Citrus clementina HOM05D007355 ORTHO05D009343 7.5e-25 117.5 83 71.1
Aqoxy5G01778 Aquilegia oxysepala HOM05D007355 ORTHO05D009343 9.7e-25 117.1 121 57.0
Haze_22626 Corylus avellana HOM05D007355 ORTHO05D009343 1.3e-24 116.7 83 73.5
Duzib093G0416 Durio zibethinus HOM05D007355 ORTHO05D009343 2.2e-24 115.9 84 69.0
Manes.18G014200 Manihot esculenta HOM05D007355 ORTHO05D009343 2.8e-24 115.5 94 62.8
PGSC0003DMG400009860 Solanum tuberosum HOM05D007355 ORTHO05D009343 3.7e-24 115.2 136 52.2
Solyc04g081380.1 Solanum lycopersicum HOM05D007355 ORTHO05D009343 4.8e-24 114.8 136 51.5
FAN20G0162 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.4e-23 113.2 121 53.7
Cfa013942 Carpinus fangiana HOM05D007355 ORTHO05D009343 1.8e-23 112.8 85 71.8
Cpa.g.sc26.34 Carica papaya HOM05D007355 ORTHO05D009343 2.4e-23 112.5 126 55.6
Lalb_Chr22g0354351 Lupinus albus HOM05D007355 ORTHO05D009343 3.1e-23 112.1 87 65.5
Nn1g05885 Nelumbo nucifera HOM05D007355 ORTHO05D009343 2.7e-22 109.0 119 52.9
Gorai.009G270200 Gossypium raimondii HOM05D007355 ORTHO05D009343 5.9e-22 107.8 86 65.1
Gohir.A05G257150 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.0e-21 107.1 85 65.9
Medtr1g025150 Medicago truncatula HOM05D007355 ORTHO05D009343 1.0e-21 107.1 83 66.3
Dinv39511 Davidia involucrata HOM05D007355 ORTHO05D009343 2.9e-21 105.5 113 54.9
Actinidia37930 Actinidia chinensis HOM05D007355 ORTHO05D009343 5.0e-21 104.8 112 54.5
Gohir.D05G258650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 5.0e-21 104.8 86 64.0
ClCG05G018320 Citrullus lanatus HOM05D007355 ORTHO05D009343 8.5e-21 104.0 84 60.7
Sed0019478 Sechium edule HOM05D007355 ORTHO05D009343 5.5e-20 101.3 82 61.0
CsaV3_3G045820 Cucumis sativus L. HOM05D007355 ORTHO05D009343 7.2e-20 100.9 83 62.7
Hma1.2p1_0638F.1_g193820 Hydrangea macrophylla HOM05D007355 ORTHO05D009343 1.6e-19 99.8 117 50.4
MBI05_g15356_MAGBIO Magnolia biondii HOM05D007355 ORTHO05D009343 3.6e-19 98.6 104 54.8
Nn5g30158 Nelumbo nucifera HOM05D007355 ORTHO05D009343 4.7e-19 98.2 111 55.0
CiPaw.07G150900 Carya illinoinensis HOM05D007355 ORTHO05D009343 1.4e-18 96.7 111 53.2
CSS0013130 Camellia sinensis var. sinensis HOM05D007355 ORTHO05D009343 2.3e-18 95.9 88 61.4
Peaxi162Scf00400g00042 Petunia axillaris HOM05D007355 ORTHO05D009343 3.0e-18 95.5 126 51.6
DCAR_017465 Daucus carota HOM05D007355 ORTHO05D009343 6.8e-18 94.4 129 45.0
MD15G1013100 Malus domestica HOM05D007355 ORTHO05D009343 8.8e-18 94.0 92 54.3
MELO3C011006.2 Cucumis melo HOM05D007355 ORTHO05D009343 2.6e-17 92.4 123 44.7
ClCG08G014360 Citrullus lanatus HOM05D007355 ORTHO05D009343 4.4e-17 91.7 118 44.9
CsaV3_2G029470 Cucumis sativus L. HOM05D007355 ORTHO05D009343 9.8e-17 90.5 91 52.7
DCAR_013865 Daucus carota HOM05D007355 ORTHO05D009343 9.8e-17 90.5 126 40.5
Sed0024841 Sechium edule HOM05D007355 ORTHO05D009343 1.3e-16 90.1 121 45.5
Lsat_1_v5_gn_2_9841 Lactuca sativa HOM05D007355 ORTHO05D009343 1.7e-16 89.7 140 45.7
Atru.chr13.303 Acer truncatum HOM05D007355 ORTHO05D009343 3.7e-16 88.6 76 59.2
Prupe.1G366200 Prunus persica HOM05D007355 ORTHO05D009343 8.3e-16 87.4 91 56.0
Sc15g0005040 Simmondsia chinensis HOM05D007355 ORTHO05D009343 1.4e-15 86.7 90 54.4
A08p29560 Brassica napus HOM05D007355 ORTHO05D009343 4.1e-15 85.1 90 51.1
C08p19840 Brassica napus HOM05D007355 ORTHO05D009343 4.1e-15 85.1 90 51.1
BolC8t49623H Brassica oleracea HOM05D007355 ORTHO05D009343 4.1e-15 85.1 90 51.1
BraA08t34894Z Brassica rapa HOM05D007355 ORTHO05D009343 4.1e-15 85.1 90 51.1
THA.LOC104814032 Tarenaya hassleriana HOM05D007355 ORTHO05D009343 4.1e-15 85.1 76 61.8
Aa31LG4G5940 Aethionema arabicum HOM05D007355 ORTHO05D009343 5.4e-15 84.7 68 64.7
BcaC08g47049 Brassica carinata HOM05D007355 ORTHO05D009343 9.1e-15 84.0 84 61.9
C06p49660 Brassica napus HOM05D007355 ORTHO05D009343 9.1e-15 84.0 70 68.6
BolC6t40005H Brassica oleracea HOM05D007355 ORTHO05D009343 9.1e-15 84.0 70 68.6
BcaC07g39013 Brassica carinata HOM05D007355 ORTHO05D009343 2.0e-14 82.8 90 50.0
CAN.G311.23 Capsicum annuum HOM05D007355 ORTHO05D009343 2.0e-14 82.8 49 79.6
SalBow7G4291 Salvia bowleyana HOM05D007355 ORTHO05D009343 3.5e-14 82.0 85 56.5
Sp1g17750 Schrenkiella parvula HOM05D007355 ORTHO05D009343 3.5e-14 82.0 91 47.3
Rhsim07G0246800 Rhododendron simsii HOM05D007355 ORTHO05D009343 4.5e-14 81.6 73 61.6
A07p41240 Brassica napus HOM05D007355 ORTHO05D009343 1.0e-13 80.5 69 65.2
BraA07t31659Z Brassica rapa HOM05D007355 ORTHO05D009343 1.0e-13 80.5 69 65.2
Thhalv10019842m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 1.3e-13 80.1 70 67.1
AL1G32690 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 1.7e-13 79.7 76 57.9
AL2G35700 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 2.9e-13 79.0 71 62.0
Eucgr.F01645 Eucalyptus grandis HOM05D007355 ORTHO05D009343 5.0e-13 78.2 73 64.4
BcaB03g14421 Brassica carinata HOM05D007355 ORTHO05D009343 2.5e-12 75.9 80 47.5
CARHR020450 Cardamine hirsuta HOM05D007355 ORTHO05D009343 5.5e-12 74.7 76 55.3
Thhalv10009918m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 5.5e-12 74.7 75 53.3
AT1G75717 Arabidopsis thaliana HOM05D007355 ORTHO05D009343 7.2e-12 74.3 72 61.1
BcaC08g45561 Brassica carinata HOM05D007355 ORTHO05D009343 9.4e-12 73.9 69 59.4
BcaB02g07039 Brassica carinata HOM05D007355 ORTHO05D009343 1.2e-11 73.6 69 60.9
C06p32480 Brassica napus HOM05D007355 ORTHO05D009343 2.1e-11 72.8 69 59.4
BolC6t38371H Brassica oleracea HOM05D007355 ORTHO05D009343 2.1e-11 72.8 69 59.4
Carub.0001s1949 Capsella rubella HOM05D007355 ORTHO05D009343 2.1e-11 72.8 77 53.2
Carub.0002s2256 Capsella rubella HOM05D007355 ORTHO05D009343 3.6e-11 72.0 72 58.3
Ah.11g039070 Amaranthus hybridus HOM05D007355 ORTHO05D009343 1.0e-10 70.5 83 53.0
CARHR069120 Cardamine hirsuta HOM05D007355 ORTHO05D009343 1.0e-10 70.5 70 55.7
BcaB03g12886 Brassica carinata HOM05D007355 ORTHO05D009343 1.4e-10 70.1 79 49.4
Migut.C00824 Erythranthe guttata HOM05D007355 ORTHO05D009343 6.8e-10 67.8 102 45.1
BcaB03g14350 Brassica carinata HOM05D007355 ORTHO05D009343 2.6e-09 65.9 71 49.3
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 1.3e-08 63.5 79 45.6
ATR0627G001 Amborella trichopoda HOM05D007355 ORTHO05D009343 3.1e-07 58.9 108 44.4
DCAR_009926 Daucus carota HOM05D007355 ORTHO05D009343 7.7e-06 54.3 84 41.7


User provided reference genes

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