Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G291800 Glycine max HOM05D006843 ORTHO05D008517 3.0e-196 688.3 352 100.0
Glyma.14G022900 Glycine max HOM05D006843 ORTHO05D008517 2.1e-189 665.6 352 95.5
Phvul.008G268300 Phaseolus vulgaris HOM05D006843 ORTHO05D008517 4.1e-177 624.8 349 92.0
VMungo0647G1675 Vigna mungo HOM05D006843 ORTHO05D008517 6.1e-173 610.9 355 90.1
arahy.Tifrunner.gnm1.ann1.Q92UKX Arachis hypogaea HOM05D006843 ORTHO05D008517 2.9e-159 565.5 353 82.7
arahy.Tifrunner.gnm1.ann1.0IA02T Arachis hypogaea HOM05D006843 ORTHO05D008517 1.9e-158 562.8 353 82.7
arahy.Tifrunner.gnm1.ann1.57CCTN Arachis hypogaea HOM05D006843 ORTHO05D008517 1.9e-158 562.8 353 82.7
arahy.Tifrunner.gnm1.ann1.BV1YAY Arachis hypogaea HOM05D006843 ORTHO05D008517 1.9e-158 562.8 353 82.7
arahy.Tifrunner.gnm1.ann1.H57FKH Arachis hypogaea HOM05D006843 ORTHO05D008517 1.9e-158 562.8 353 82.7
arahy.Tifrunner.gnm1.ann1.J1CT6Y Arachis hypogaea HOM05D006843 ORTHO05D008517 7.2e-158 560.8 353 82.4
LjContig00272g0007634 Lotus japonicus HOM05D006843 ORTHO05D008517 3.6e-157 558.5 357 81.2
Lalb_Chr04g0248381 Lupinus albus HOM05D006843 ORTHO05D008517 4.7e-157 558.1 351 81.8
Psat2g011720 Pisum sativum HOM05D006843 ORTHO05D008517 7.5e-155 550.8 343 82.8
TPR.G1211 Trifolium pratense HOM05D006843 ORTHO05D008517 3.7e-154 548.5 352 80.4
Ca_06326_v3 Cicer arietinum L. HOM05D006843 ORTHO05D008517 4.9e-154 548.1 350 82.3
Medtr5g092970 Medicago truncatula HOM05D006843 ORTHO05D008517 3.8e-151 538.5 354 79.4
Actinidia05093 Actinidia chinensis HOM05D006843 ORTHO05D008517 7.5e-131 471.1 351 68.9
Thecc.07G035800 Theobroma cacao HOM05D006843 ORTHO05D008517 2.9e-130 469.2 352 69.9
Gohir.A01G079900 Gossypium hirsutum HOM05D006843 ORTHO05D008517 8.3e-130 467.6 352 68.8
Gohir.D01G067100 Gossypium hirsutum HOM05D006843 ORTHO05D008517 1.4e-129 466.8 352 68.8
GSVIVG01037656001 Vitis vinifera HOM05D006843 ORTHO05D008517 1.0e-127 460.7 351 67.2
Cfa020337 Carpinus fangiana HOM05D006843 ORTHO05D008517 3.9e-127 458.8 351 68.1
CSS0043197 Camellia sinensis var. sinensis HOM05D006843 ORTHO05D008517 5.1e-127 458.4 352 66.5
Gorai.002G089000 Gossypium raimondii HOM05D006843 ORTHO05D008517 6.6e-127 458.0 352 67.6
Prupe.4G214500 Prunus persica HOM05D006843 ORTHO05D008517 2.5e-126 456.1 354 66.7
Duzib268G1400 Durio zibethinus HOM05D006843 ORTHO05D008517 3.3e-126 455.7 352 68.2
QL08p010009 Quercus lobata HOM05D006843 ORTHO05D008517 1.6e-125 453.4 347 68.6
CiPaw.11G190100 Carya illinoinensis HOM05D006843 ORTHO05D008517 4.7e-125 451.8 354 66.9
Haze_09681 Corylus avellana HOM05D006843 ORTHO05D008517 4.7e-125 451.8 351 67.5
CiPaw.12G130200 Carya illinoinensis HOM05D006843 ORTHO05D008517 7.6e-123 444.5 350 65.4
Manes.03G129700 Manihot esculenta HOM05D006843 ORTHO05D008517 2.9e-122 442.6 351 65.8
Rhsim06G0217400 Rhododendron simsii HOM05D006843 ORTHO05D008517 8.4e-122 441.0 352 64.8
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 5.4e-121 438.3 339 67.6
CANSAT11G0475 Cannabis sativa HOM05D006843 ORTHO05D008517 6.0e-120 434.9 351 64.4
TWI39G1240 Tripterygium wilfordii HOM05D006843 ORTHO05D008517 3.9e-119 432.2 357 64.1
ClCG09G010830 Citrullus lanatus HOM05D006843 ORTHO05D008517 4.3e-118 428.7 369 62.6
MELO3C013160.2 Cucumis melo HOM05D006843 ORTHO05D008517 1.6e-117 426.8 367 61.3
Ciclev10008752m.g Citrus clementina HOM05D006843 ORTHO05D008517 6.2e-117 424.9 358 62.8
TAR624G1415 Trochodendron aralioides HOM05D006843 ORTHO05D008517 6.2e-117 424.9 349 64.2
Cpa.g.sc12.302 Carica papaya HOM05D006843 ORTHO05D008517 1.8e-116 423.3 355 64.5
CsaV3_7G021850 Cucumis sativus L. HOM05D006843 ORTHO05D008517 2.4e-116 422.9 338 65.4
Potri.011G090700 Populus trichocarpa HOM05D006843 ORTHO05D008517 5.2e-116 421.8 354 63.0
MD11G1217200 Malus domestica HOM05D006843 ORTHO05D008517 1.2e-115 420.6 354 61.9
Nn1g03519 Nelumbo nucifera HOM05D006843 ORTHO05D008517 2.9e-114 416.0 352 62.8
PGR083G2310 Punica granatum HOM05D006843 ORTHO05D008517 4.9e-114 415.2 356 62.4
Eucgr.F00758 Eucalyptus grandis HOM05D006843 ORTHO05D008517 4.2e-113 412.1 355 60.8
Sc03g0008560 Simmondsia chinensis HOM05D006843 ORTHO05D008517 4.2e-113 412.1 345 62.9
Hma1.2p1_0673F.1_g201400 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 5.4e-113 411.8 304 66.8
Cc05_g13830 Coffea canephora HOM05D006843 ORTHO05D008517 9.3e-113 411.0 353 59.8
HanXRQChr11g0337271 Helianthus annuus HOM05D006843 ORTHO05D008517 1.6e-112 410.2 352 59.9
MBI18_g14135_MAGBIO Magnolia biondii HOM05D006843 ORTHO05D008517 4.6e-112 408.7 352 59.9
Sabra11G0086300 Salix brachista HOM05D006843 ORTHO05D008517 1.3e-111 407.1 354 62.1
Thhalv10025611m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 9.6e-110 401.0 349 60.5
AT4G26980 Arabidopsis thaliana HOM05D006843 ORTHO05D008517 3.6e-109 399.1 339 60.5
THA.LOC104809268 Tarenaya hassleriana HOM05D006843 ORTHO05D008517 3.6e-109 399.1 350 58.3
Nitab4.5_0003495g0070 Nicotiana tabacum HOM05D006843 ORTHO05D008517 6.2e-109 398.3 351 59.0
Carub.0007s1386 Capsella rubella HOM05D006843 ORTHO05D008517 3.1e-108 396.0 339 60.8
RcHm_v2.0_Chr5g0040061 Rosa chinensis HOM05D006843 ORTHO05D008517 2.0e-107 393.3 355 59.2
Ah.04g165900 Amaranthus hybridus HOM05D006843 ORTHO05D008517 1.3e-106 390.6 352 59.1
CARHR234590 Cardamine hirsuta HOM05D006843 ORTHO05D008517 1.4e-105 387.1 347 58.5
FvH4_3g22820 Fragaria vesca HOM05D006843 ORTHO05D008517 1.9e-105 386.7 354 57.3
AL7G25850 Arabidopsis lyrata HOM05D006843 ORTHO05D008517 2.4e-105 386.3 338 58.9
MSTRG.6924 Avicennia marina HOM05D006843 ORTHO05D008517 2.4e-105 386.3 358 57.8
AUR62015782 Chenopodium quinoa HOM05D006843 ORTHO05D008517 2.4e-105 386.3 344 60.2
Peaxi162Scf00235g00218 Petunia axillaris HOM05D006843 ORTHO05D008517 2.4e-105 386.3 311 62.1
FAN16G2069 Fragaria x ananassa HOM05D006843 ORTHO05D008517 4.2e-105 385.6 354 57.6
A03p56990 Brassica napus HOM05D006843 ORTHO05D008517 2.7e-104 382.9 341 59.8
FAN25G2076 Fragaria x ananassa HOM05D006843 ORTHO05D008517 1.3e-103 380.6 309 62.5
Sed0013659 Sechium edule HOM05D006843 ORTHO05D008517 1.3e-103 380.6 365 55.3
BcaC06g32719 Brassica carinata HOM05D006843 ORTHO05D008517 1.7e-103 380.2 348 58.9
C07p55080 Brassica napus HOM05D006843 ORTHO05D008517 2.3e-103 379.8 344 58.7
Nitab4.5_0007360g0010 Nicotiana tabacum HOM05D006843 ORTHO05D008517 3.0e-103 379.4 301 60.1
Aa31LG5G10440 Aethionema arabicum HOM05D006843 ORTHO05D008517 1.5e-102 377.1 348 56.9
ECA236G1023 Erigeron canadensis HOM05D006843 ORTHO05D008517 1.5e-102 377.1 302 63.2
Lsat_1_v5_gn_7_109981 Lactuca sativa HOM05D006843 ORTHO05D008517 1.5e-102 377.1 316 62.0
Aqoxy4G01855 Aquilegia oxysepala HOM05D006843 ORTHO05D008517 1.9e-102 376.7 356 57.6
Solyc07g064630.4 Solanum lycopersicum HOM05D006843 ORTHO05D008517 2.5e-102 376.3 307 61.2
PGSC0003DMG402022316 Solanum tuberosum HOM05D006843 ORTHO05D008517 7.4e-102 374.8 307 60.9
Migut.M01756 Erythranthe guttata HOM05D006843 ORTHO05D008517 1.6e-101 373.6 358 56.4
EL10Ac4g07802 Beta vulgaris HOM05D006843 ORTHO05D008517 3.1e-100 369.4 409 51.6
Sopen07g032830 Solanum pennellii HOM05D006843 ORTHO05D008517 9.0e-100 367.9 314 59.9
DCAR_012722 Daucus carota HOM05D006843 ORTHO05D008517 2.2e-98 363.2 346 56.9
Hma1.2p1_0673F.1_g201390 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 4.2e-97 359.0 304 60.9
SGA_v2.0_scaffold165G38275 Striga asiatica HOM05D006843 ORTHO05D008517 7.4e-94 348.2 378 50.8
Lj8A169G88 Lonicera japonica HOM05D006843 ORTHO05D008517 9.0e-92 341.3 299 60.2
HPP92_013325 Vanilla planifolia HOM05D006843 ORTHO05D008517 1.3e-90 337.4 308 55.2
CAN.G337.136 Capsicum annuum HOM05D006843 ORTHO05D008517 1.1e-89 334.3 269 59.9
BolC7t46005H Brassica oleracea HOM05D006843 ORTHO05D008517 7.9e-88 328.2 265 62.3
BraA03t14769Z Brassica rapa HOM05D006843 ORTHO05D008517 3.0e-87 326.2 268 62.3
unitig_8.g4621 Utricularia gibba HOM05D006843 ORTHO05D008517 3.1e-84 316.2 336 52.7
Zm00001eb224560 Zea mays HOM05D006843 ORTHO05D008517 1.4e-81 307.4 349 47.9
PSO063G3629 Papaver somniferum HOM05D006843 ORTHO05D008517 7.9e-80 301.6 344 48.5
AUR62020435 Chenopodium quinoa HOM05D006843 ORTHO05D008517 2.5e-78 296.6 409 46.9
PSO170G2271 Papaver somniferum HOM05D006843 ORTHO05D008517 2.5e-78 296.6 344 48.0
Zm00001eb273720 Zea mays HOM05D006843 ORTHO05D008517 6.3e-77 292.0 272 55.1
Pp3c9_17980 Physcomitrium patens HOM05D006843 ORTHO05D008517 6.9e-76 288.5 304 52.0
Mapoly0001s0246 Marchantia polymorpha HOM05D006843 ORTHO05D008517 2.5e-73 280.0 338 47.0
Thhalv10026846m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 1.8e-63 247.3 267 52.1
Psat5g064560 Pisum sativum HOM05D006843 ORTHO05D008517 4.1e-60 236.1 140 85.7
Psat4g156200 Pisum sativum HOM05D006843 ORTHO05D008517 1.2e-59 234.6 140 85.7
Psat7g029280 Pisum sativum HOM05D006843 ORTHO05D008517 2.6e-59 233.4 144 82.6
CBR_g34195 Chara braunii HOM05D006843 ORTHO05D008517 1.4e-55 221.1 388 36.1
SMO234G0011 Selaginella moellendorffii HOM05D006843 ORTHO05D008517 6.7e-55 218.8 257 47.9
Hund02000 Selenicereus undatus HOM05D006843 ORTHO05D008517 2.4e-52 210.3 214 54.7
Atru.chr2.3418 Acer truncatum HOM05D006843 ORTHO05D008517 2.1e-48 197.2 134 70.1
ATR0490G005 Amborella trichopoda HOM05D006843 ORTHO05D008517 6.1e-48 195.7 187 54.5
vmacro11722 Vaccinium macrocarpon HOM05D006843 ORTHO05D008517 6.3e-45 185.7 183 55.7
Haze_01866 Corylus avellana HOM05D006843 ORTHO05D008517 3.2e-41 173.3 191 56.0
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 7.5e-38 162.2 122 67.2
Os06g0679700 Oryza sativa ssp. japonica HOM05D006843 ORTHO05D008517 1.3e-37 161.4 166 53.6
Psat3g185160 Pisum sativum HOM05D006843 ORTHO05D008517 3.7e-37 159.8 105 81.9
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 5.4e-36 156.0 105 78.1
CDE02G2447 Ceratophyllum demersum HOM05D006843 ORTHO05D008517 1.6e-27 127.9 249 34.9
MCO05G180 Micromonas commoda HOM05D006843 ORTHO05D008517 3.4e-22 110.2 195 32.8
Psat7g126680 Pisum sativum HOM05D006843 ORTHO05D008517 7.8e-19 99.0 62 83.9
Dinv20053 Davidia involucrata HOM05D006843 ORTHO05D008517 2.6e-14 84.0 112 41.1
ATR0926G001 Amborella trichopoda HOM05D006843 ORTHO05D008517 3.3e-09 67.0 69 55.1


User provided reference genes

Program Settings