Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G210100 Glycine max HOM05D012119 ORTHO05D002375 7.4e-110 400.6 207 100.0
Glyma.02G210000 Glycine max HOM05D012119 ORTHO05D002375 7.0e-44 181.4 212 55.2
Lalb_Chr10g0102541 Lupinus albus HOM05D012119 ORTHO05D002375 6.4e-37 158.3 205 47.8
VMungo0647G1593 Vigna mungo HOM05D012119 ORTHO05D002375 6.2e-32 141.7 204 45.6
Glyma.02G210300 Glycine max HOM05D012119 ORTHO05D002375 2.2e-29 133.3 205 45.9
Glyma.14G177800 Glycine max HOM05D012119 ORTHO05D002375 2.1e-27 126.7 204 45.6
Phvul.008G177300 Phaseolus vulgaris HOM05D012119 ORTHO05D002375 1.9e-25 120.2 195 43.1
arahy.Tifrunner.gnm1.ann1.9U5DT8 Arachis hypogaea HOM05D012119 ORTHO05D002375 4.3e-25 119.0 211 42.7
arahy.Tifrunner.gnm1.ann1.RDUL0C Arachis hypogaea HOM05D012119 ORTHO05D002375 4.3e-25 119.0 211 41.7
Lalb_Chr17g0344311 Lupinus albus HOM05D012119 ORTHO05D002375 9.5e-25 117.9 135 48.9
arahy.Tifrunner.gnm1.ann1.30DIRF Arachis hypogaea HOM05D012119 ORTHO05D002375 1.7e-21 107.1 210 37.1
Medtr5g064840 Medicago truncatula HOM05D012119 ORTHO05D002375 2.7e-19 99.8 214 37.9
arahy.Tifrunner.gnm1.ann1.69RQXC Arachis hypogaea HOM05D012119 ORTHO05D002375 3.9e-18 95.9 210 34.8
arahy.Tifrunner.gnm1.ann1.3HQ27V Arachis hypogaea HOM05D012119 ORTHO05D002375 5.8e-14 82.0 160 38.1
arahy.Tifrunner.gnm1.ann1.HV7MU1 Arachis hypogaea HOM05D012119 ORTHO05D002375 7.6e-14 81.6 159 37.1
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 3.8e-13 79.3 167 35.9
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 7.1e-12 75.1 148 34.5
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 9.2e-12 74.7 144 35.4
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 2.1e-11 73.6 146 37.0
RcHm_v2.0_Chr7g0238201 Rosa chinensis HOM05D004728 ORTHO05D002375 2.1e-11 73.6 208 30.8
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 7.8e-11 71.6 159 32.1
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.0e-10 71.2 133 34.6
Thecc.08G100900 Theobroma cacao HOM05D004728 ORTHO05D002375 1.0e-10 71.2 152 32.2
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 1.3e-10 70.9 193 31.6
EL10Ac1g01137 Beta vulgaris HOM05D004728 ORTHO05D002375 2.3e-10 70.1 200 28.0
Gorai.005G094700 Gossypium raimondii HOM05D004728 ORTHO05D002375 5.1e-10 68.9 148 33.8
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 5.1e-10 68.9 176 27.3
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 5.1e-10 68.9 155 32.9
Gohir.A02G076900 Gossypium hirsutum HOM05D004728 ORTHO05D002375 8.7e-10 68.2 144 34.0
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 1.1e-09 67.8 209 29.2
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.9e-09 67.0 149 32.2
FvH4_5g36280 Fragaria vesca HOM05D004728 ORTHO05D002375 3.3e-09 66.2 170 30.6
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 4.3e-09 65.9 169 26.0
FAN04G1034 Fragaria x ananassa HOM05D004728 ORTHO05D002375 4.3e-09 65.9 170 30.6
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 4.3e-09 65.9 136 33.8
Lj4A728G42 Lonicera japonica HOM05D004728 ORTHO05D002375 3.6e-08 62.8 167 28.7
CiPaw.16G032400 Carya illinoinensis HOM05D004728 ORTHO05D002375 4.7e-08 62.4 135 30.4
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 4.7e-08 62.4 137 30.7
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 6.2e-08 62.0 139 33.8
Gohir.D05G225800 Gossypium hirsutum HOM05D004728 ORTHO05D002375 6.2e-08 62.0 176 30.1
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 6.2e-08 62.0 139 30.9
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.4e-07 60.8 149 29.5
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 1.4e-07 60.8 152 32.2
HanXRQChr05g0149651 Helianthus annuus HOM05D004728 ORTHO05D002375 1.4e-07 60.8 130 31.5
Lj4A728T44 Lonicera japonica HOM05D004728 ORTHO05D002375 1.4e-07 60.8 201 26.9
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 1.8e-07 60.5 148 29.1
DCAR_012879 Daucus carota HOM05D004728 ORTHO05D002375 3.1e-07 59.7 158 29.7
RcHm_v2.0_Chr7g0238181 Rosa chinensis HOM05D004728 ORTHO05D002375 3.1e-07 59.7 170 29.4
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 4.0e-07 59.3 143 30.8
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 4.0e-07 59.3 133 35.3
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 5.3e-07 58.9 184 28.8
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 6.9e-07 58.5 139 30.9
Sabra02G0079600 Salix brachista HOM05D004728 ORTHO05D002375 6.9e-07 58.5 193 29.5
HanXRQChr17g0561041 Helianthus annuus HOM05D004728 ORTHO05D002375 9.0e-07 58.2 123 33.3
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 1.2e-06 57.8 144 31.2
Potri.002G101500 Populus trichocarpa HOM05D004728 ORTHO05D002375 1.2e-06 57.8 192 26.6
Actinidia33119 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.5e-06 57.4 140 27.1
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 1.5e-06 57.4 132 27.3
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 1.5e-06 57.4 132 27.3
DCAR_012878 Daucus carota HOM05D004728 ORTHO05D002375 1.5e-06 57.4 154 26.6
Rhsim07G0205400 Rhododendron simsii HOM05D004728 ORTHO05D002375 2.0e-06 57.0 121 33.1
Duzib093G1766 Durio zibethinus HOM05D004728 ORTHO05D002375 2.6e-06 56.6 124 33.9
Gohir.A05G223100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 2.6e-06 56.6 186 30.1
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 2.6e-06 56.6 156 32.1
Eucgr.F00382 Eucalyptus grandis HOM05D004728 ORTHO05D002375 3.4e-06 56.2 116 31.0
Gohir.D02G084100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 3.4e-06 56.2 112 33.0
MSTRG.25340 Avicennia marina HOM05D004728 ORTHO05D002375 5.8e-06 55.5 146 30.8
Lj4A728T43 Lonicera japonica HOM05D004728 ORTHO05D002375 5.8e-06 55.5 115 31.3
ECA247G2878 Erigeron canadensis HOM05D004728 ORTHO05D002375 9.9e-06 54.7 135 28.9
FAN08G2352 Fragaria x ananassa HOM05D004728 ORTHO05D002375 9.9e-06 54.7 108 34.3


User provided reference genes

Program Settings