Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G057600 Glycine max HOM05D004747 ORTHO05D006051 2.1e-73 279.3 175 100.0
Lalb_Chr05g0227631 Lupinus albus HOM05D004747 ORTHO05D006051 4.4e-23 112.1 99 63.6
arahy.Tifrunner.gnm1.ann1.0AQ0IW Arachis hypogaea HOM05D004747 ORTHO05D006051 2.9e-22 109.4 99 62.6
Lalb_Chr09g0333571 Lupinus albus HOM05D004747 ORTHO05D006051 2.9e-22 109.4 98 63.3
Ca_22260_v3 Cicer arietinum L. HOM05D004747 ORTHO05D006051 2.4e-21 106.3 98 62.2
Psat4g092040 Pisum sativum HOM05D004747 ORTHO05D006051 3.2e-21 105.9 96 63.5
Manes.02G092600 Manihot esculenta HOM05D004747 ORTHO05D006051 9.2e-21 104.4 101 61.4
VMungo1215G2053 Vigna mungo HOM05D004747 ORTHO05D006051 2.7e-20 102.8 97 62.9
TPR.G34973 Trifolium pratense HOM05D004747 ORTHO05D006051 4.6e-20 102.1 94 62.8
Atru.chr3.560 Acer truncatum HOM05D004747 ORTHO05D006051 7.8e-20 101.3 97 60.8
Sabra05G0102100 Salix brachista HOM05D004747 ORTHO05D006051 1.0e-19 100.9 100 59.0
MELO3C007821.2 Cucumis melo HOM05D004747 ORTHO05D006051 1.3e-19 100.5 100 60.0
FAN23G1256 Fragaria x ananassa HOM05D004747 ORTHO05D006051 1.3e-19 100.5 98 59.2
FAN26G3322 Fragaria x ananassa HOM05D004747 ORTHO05D006051 1.3e-19 100.5 98 59.2
FAN28G1132 Fragaria x ananassa HOM05D004747 ORTHO05D006051 1.3e-19 100.5 98 59.2
Glyma.01G175100 Glycine max HOM05D004747 ORTHO05D006051 2.3e-19 99.8 98 60.2
Sabra07G0023600 Salix brachista HOM05D004747 ORTHO05D006051 3.0e-19 99.4 100 58.0
CsaV3_6G046180 Cucumis sativus L. HOM05D004747 ORTHO05D006051 3.9e-19 99.0 100 59.0
CANSAT01G3054 Cannabis sativa HOM05D004747 ORTHO05D006051 5.1e-19 98.6 101 59.4
Dinv26824 Davidia involucrata HOM05D004747 ORTHO05D006051 5.1e-19 98.6 97 56.7
Manes.01G134400 Manihot esculenta HOM05D004747 ORTHO05D006051 5.1e-19 98.6 98 59.2
Potri.005G124300 Populus trichocarpa HOM05D004747 ORTHO05D006051 5.1e-19 98.6 100 58.0
FvH4_1g13450 Fragaria vesca HOM05D004747 ORTHO05D006051 6.6e-19 98.2 98 58.2
FAN19G0426 Fragaria x ananassa HOM05D004747 ORTHO05D006051 6.6e-19 98.2 98 58.2
Medtr8g077840 Medicago truncatula HOM05D004747 ORTHO05D006051 6.6e-19 98.2 92 60.9
Ciclev10025502m.g Citrus clementina HOM05D004747 ORTHO05D006051 8.6e-19 97.8 131 61.8
Dinv39972 Davidia involucrata HOM05D004747 ORTHO05D006051 1.1e-18 97.4 100 57.0
Phvul.002G029300 Phaseolus vulgaris HOM05D004747 ORTHO05D006051 1.9e-18 96.7 94 61.7
Thecc.01G037400 Theobroma cacao HOM05D004747 ORTHO05D006051 1.9e-18 96.7 97 60.8
RcHm_v2.0_Chr2g0101831 Rosa chinensis HOM05D004747 ORTHO05D006051 3.3e-18 95.9 99 58.6
arahy.Tifrunner.gnm1.ann1.Q9RGLK Arachis hypogaea HOM05D004747 ORTHO05D006051 4.3e-18 95.5 99 58.6
Lj4g0010267 Lotus japonicus HOM05D004747 ORTHO05D006051 4.3e-18 95.5 91 60.4
Haze_15104 Corylus avellana HOM05D004747 ORTHO05D006051 5.6e-18 95.1 100 59.0
ClCG01G019460 Citrullus lanatus HOM05D004747 ORTHO05D006051 9.5e-18 94.4 98 57.1
Nn1g05031 Nelumbo nucifera HOM05D004747 ORTHO05D006051 9.5e-18 94.4 98 56.1
Sed0017755 Sechium edule HOM05D004747 ORTHO05D006051 9.5e-18 94.4 97 57.7
Potri.007G026900 Populus trichocarpa HOM05D004747 ORTHO05D006051 1.2e-17 94.0 94 59.6
Cfa004298 Carpinus fangiana HOM05D000682 ORTHO05D000510 1.6e-17 93.6 100 58.0
Glyma.11G067300 Glycine max HOM05D004747 ORTHO05D006051 1.6e-17 93.6 93 60.2
Lalb_Chr05g0212861 Lupinus albus HOM05D004747 ORTHO05D006051 1.6e-17 93.6 97 57.7
MD15G1264300 Malus domestica HOM05D004747 ORTHO05D006051 1.6e-17 93.6 99 57.6
CiPaw.01G036600 Carya illinoinensis HOM05D004747 ORTHO05D006051 2.1e-17 93.2 95 58.9
Prupe.7G153200 Prunus persica HOM05D004747 ORTHO05D006051 2.8e-17 92.8 99 57.6
Gohir.A10G095200 Gossypium hirsutum HOM05D004747 ORTHO05D006051 3.6e-17 92.4 97 57.7
Gohir.D10G092700 Gossypium hirsutum HOM05D004747 ORTHO05D006051 3.6e-17 92.4 97 57.7
Gorai.011G101900 Gossypium raimondii HOM05D004747 ORTHO05D006051 3.6e-17 92.4 97 57.7
Sed0005805 Sechium edule HOM05D004747 ORTHO05D006051 4.7e-17 92.0 98 57.1
CSS0048961 Camellia sinensis var. sinensis HOM05D004747 ORTHO05D006051 1.1e-16 90.9 98 54.1
CiPaw.02G016400 Carya illinoinensis HOM05D004747 ORTHO05D006051 1.1e-16 90.9 98 56.1
COL.COLO4_22095 Corchorus olitorius HOM05D004747 ORTHO05D006051 1.1e-16 90.9 96 57.3
Duzib264G0087 Durio zibethinus HOM05D004747 ORTHO05D006051 1.4e-16 90.5 98 57.1
HPP92_014469 Vanilla planifolia HOM05D004747 ORTHO05D006051 1.4e-16 90.5 99 56.6
CSS0024014 Camellia sinensis var. sinensis HOM05D004747 ORTHO05D006051 1.8e-16 90.1 99 54.5
Lsat_1_v5_gn_2_76601 Lactuca sativa HOM05D004747 ORTHO05D006051 1.8e-16 90.1 99 57.6
GSVIVG01018981001 Vitis vinifera HOM05D004747 ORTHO05D006051 1.8e-16 90.1 98 55.1
TWI53G0963 Tripterygium wilfordii HOM05D004747 ORTHO05D006051 2.3e-16 89.7 98 55.1
ATR0733G064 Amborella trichopoda HOM05D004747 ORTHO05D006051 6.8e-16 88.2 99 53.5
DCAR_025922 Daucus carota HOM05D004747 ORTHO05D006051 6.8e-16 88.2 92 57.6
Actinidia19177 Actinidia chinensis HOM05D004747 ORTHO05D006051 8.9e-16 87.8 98 54.1
HanXRQChr14g0441201 Helianthus annuus HOM05D004747 ORTHO05D006051 8.9e-16 87.8 93 57.0
PSO764G0172 Papaver somniferum HOM05D004747 ORTHO05D006051 8.9e-16 87.8 101 53.5
vmacro12724 Vaccinium macrocarpon HOM05D004747 ORTHO05D006051 8.9e-16 87.8 100 52.0
Aqoxy5G01657 Aquilegia oxysepala HOM05D004747 ORTHO05D006051 1.2e-15 87.4 101 52.5
TAR376G1008 Trochodendron aralioides HOM05D004747 ORTHO05D006051 1.2e-15 87.4 100 52.0
TAR628G1004 Trochodendron aralioides HOM05D004747 ORTHO05D006051 1.2e-15 87.4 99 52.5
EL10Ac6g14938 Beta vulgaris HOM05D004747 ORTHO05D006051 1.5e-15 87.0 97 53.6
Ah.02g126430 Amaranthus hybridus HOM05D004747 ORTHO05D006051 4.4e-15 85.5 97 53.6
ECA238G3955 Erigeron canadensis HOM05D004747 ORTHO05D006051 4.4e-15 85.5 98 53.1
HanXRQChr07g0192831 Helianthus annuus HOM05D004747 ORTHO05D006051 4.4e-15 85.5 92 55.4
TWI73G1158 Tripterygium wilfordii HOM05D004747 ORTHO05D006051 5.8e-15 85.1 98 54.1
Cc07_g09390 Coffea canephora HOM05D004747 ORTHO05D006051 7.6e-15 84.7 93 54.8
MBI16_g37699_MAGBIO Magnolia biondii HOM05D004747 ORTHO05D006051 7.6e-15 84.7 101 49.5
PSO541G4083 Papaver somniferum HOM05D004747 ORTHO05D006051 9.9e-15 84.3 103 52.4
PSO731G0026 Papaver somniferum HOM05D004747 ORTHO05D006051 1.3e-14 84.0 101 51.5
Rhsim08G0114500 Rhododendron simsii HOM05D004747 ORTHO05D006051 1.7e-14 83.6 91 54.9
TWI09G1640 Tripterygium wilfordii HOM05D004747 ORTHO05D006051 1.7e-14 83.6 98 52.0
PSO675G8944 Papaver somniferum HOM05D004747 ORTHO05D006051 2.2e-14 83.2 151 52.3
Sc07g0000250 Simmondsia chinensis HOM05D004747 ORTHO05D006051 2.9e-14 82.8 92 53.3
AUR62003163 Chenopodium quinoa HOM05D004747 ORTHO05D006051 4.9e-14 82.0 98 52.0
AUR62007983 Chenopodium quinoa HOM05D004747 ORTHO05D006051 4.9e-14 82.0 98 52.0
vmacro17845 Vaccinium macrocarpon HOM05D004747 ORTHO05D006051 6.4e-14 81.6 106 47.2
SGA_v2.0_scaffold276G46638 Striga asiatica HOM05D004747 ORTHO05D006051 8.4e-14 81.3 93 52.7
PGR102G2748 Punica granatum HOM05D004747 ORTHO05D006051 1.1e-13 80.9 100 55.0
Duzib187G1223 Durio zibethinus HOM05D004747 ORTHO05D006051 1.4e-13 80.5 98 54.1
CDE03G0295 Ceratophyllum demersum HOM05D004747 ORTHO05D006051 2.4e-13 79.7 103 48.5
CDE04G0203 Ceratophyllum demersum HOM05D004747 ORTHO05D006051 2.4e-13 79.7 103 48.5
Aa31LG1G15300 Aethionema arabicum HOM05D004747 ORTHO05D006051 4.1e-13 79.0 99 51.5
Migut.H01001 Erythranthe guttata HOM05D004747 ORTHO05D006051 5.4e-13 78.6 95 50.5
Thhalv10004249m.g Eutrema salsugineum HOM05D004747 ORTHO05D006051 7.1e-13 78.2 99 50.5
SMO196G0071 Selaginella moellendorffii HOM05D004747 ORTHO05D006051 9.2e-13 77.8 88 51.1
DCAR_017262 Daucus carota HOM05D004747 ORTHO05D006051 1.6e-12 77.0 93 50.5
Eucgr.H01267 Eucalyptus grandis HOM05D004747 ORTHO05D006051 1.6e-12 77.0 99 51.5
Oeu054757.1 Olea europaea HOM05D004747 ORTHO05D006051 3.5e-12 75.9 136 52.2
BcaB04g20104 Brassica carinata HOM05D000104 ORTHO05D006241 6.0e-12 75.1 98 48.0
Sc16g0000910 Simmondsia chinensis HOM05D004747 ORTHO05D006051 6.0e-12 75.1 97 46.4
A09p09800 Brassica napus HOM05D000104 ORTHO05D006241 1.3e-11 73.9 98 46.9
C09p11600 Brassica napus HOM05D000104 ORTHO05D006241 1.3e-11 73.9 98 46.9
BolC9t54053H Brassica oleracea HOM05D004747 ORTHO05D006051 1.3e-11 73.9 98 46.9
BraA09t36627Z Brassica rapa HOM05D000104 ORTHO05D006241 1.3e-11 73.9 98 46.9
Sp2g29940 Schrenkiella parvula HOM05D004747 ORTHO05D006051 2.3e-11 73.2 92 51.1
CAN.G358.106 Capsicum annuum HOM05D004747 ORTHO05D006051 8.6e-11 71.2 99 49.5
Cpa.g.sc337.6 Carica papaya HOM05D004747 ORTHO05D006051 8.6e-11 71.2 146 35.6
Mapoly0005s0256 Marchantia polymorpha HOM05D004747 ORTHO05D006051 1.1e-10 70.9 95 48.4
Pp3c7_6390 Physcomitrium patens HOM05D004747 ORTHO05D006051 1.1e-10 70.9 100 48.0
Zm00001eb224440 Zea mays HOM05D004747 ORTHO05D006051 1.9e-10 70.1 91 45.1
Pp3c11_26490 Physcomitrium patens HOM05D004747 ORTHO05D006051 2.5e-10 69.7 104 45.2
MD02G1149700 Malus domestica HOM05D004747 ORTHO05D006051 3.3e-10 69.3 86 54.7
Nitab4.5_0000434g0070 Nicotiana tabacum HOM05D004747 ORTHO05D006051 4.3e-10 68.9 99 48.5
Nitab4.5_0004711g0020 Nicotiana tabacum HOM05D004747 ORTHO05D006051 4.3e-10 68.9 99 48.5
Peaxi162Scf00515g00430 Petunia axillaris HOM05D004747 ORTHO05D006051 4.3e-10 68.9 98 45.9
AL5G30830 Arabidopsis lyrata HOM05D004747 ORTHO05D006051 1.2e-09 67.4 88 50.0
AT3G50670 Arabidopsis thaliana HOM05D004747 ORTHO05D006051 1.2e-09 67.4 88 50.0
BcaB02g09994 Brassica carinata HOM05D000104 ORTHO05D006241 2.1e-09 66.6 93 47.3
Thhalv10010375m.g Eutrema salsugineum HOM05D004747 ORTHO05D006051 2.1e-09 66.6 88 48.9
CBR_g28042 Chara braunii HOM05D004747 ORTHO05D006051 3.6e-09 65.9 136 36.8
Sp5g11550 Schrenkiella parvula HOM05D004747 ORTHO05D006051 3.6e-09 65.9 91 49.5
Carub.0005s1700 Capsella rubella HOM05D004747 ORTHO05D006051 4.7e-09 65.5 100 47.0
PGSC0003DMG400014893 Solanum tuberosum HOM05D004747 ORTHO05D006051 4.7e-09 65.5 93 48.4
Solyc02g085420.4 Solanum lycopersicum HOM05D004747 ORTHO05D006051 8.1e-09 64.7 93 48.4
Sopen02g030100 Solanum pennellii HOM05D004747 ORTHO05D006051 8.1e-09 64.7 93 48.4
Hund14148 Selenicereus undatus HOM05D004747 ORTHO05D006051 1.1e-08 64.3 121 40.5
BcaC04g23156 Brassica carinata HOM05D004747 ORTHO05D006051 4.0e-08 62.4 89 46.1
QL06p045745 Quercus lobata HOM05D004747 ORTHO05D006051 1.2e-07 60.8 71 54.9
unitig_21.g20956 Utricularia gibba HOM05D004747 ORTHO05D006051 2.0e-07 60.1 104 40.4


User provided reference genes

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