Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G010200 Glycine max HOM05D007717 ORTHO05D009694 1.4e-142 509.6 256 100.0
VMungo0720G1298 Vigna mungo HOM05D007717 ORTHO05D009694 3.3e-120 435.3 256 82.4
Phvul.007G212300 Phaseolus vulgaris HOM05D007717 ORTHO05D009694 3.8e-116 421.8 256 81.2
Lj5g0017185 Lotus japonicus HOM05D007717 ORTHO05D009694 3.1e-110 402.1 256 78.5
Lalb_Chr06g0167011 Lupinus albus HOM05D007717 ORTHO05D009694 5.0e-108 394.8 257 79.0
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 4.0e-105 385.2 254 74.8
arahy.Tifrunner.gnm1.ann1.P1ZICW Arachis hypogaea HOM05D007717 ORTHO05D009694 3.7e-103 378.6 260 74.6
Medtr1g086585 Medicago truncatula HOM05D007717 ORTHO05D009694 5.3e-102 374.8 254 73.6
Psat6g160600 Pisum sativum HOM05D007717 ORTHO05D009694 4.2e-99 365.2 225 80.0
CiPaw.08G086800 Carya illinoinensis HOM05D007717 ORTHO05D009694 1.2e-96 357.1 255 69.0
Haze_17022 Corylus avellana HOM05D007717 ORTHO05D009694 1.1e-91 340.5 254 66.9
Actinidia17924 Actinidia chinensis HOM05D007717 ORTHO05D009694 1.5e-91 340.1 256 64.5
QL12p018825 Quercus lobata HOM05D007717 ORTHO05D009694 1.2e-90 337.0 248 67.3
Potri.014G117500 Populus trichocarpa HOM05D007717 ORTHO05D009694 8.0e-90 334.3 232 69.8
TAR362G0991 Trochodendron aralioides HOM05D007717 ORTHO05D009694 5.2e-89 331.6 212 73.6
Cfa001519 Carpinus fangiana HOM05D007717 ORTHO05D009694 2.6e-88 329.3 221 71.5
ClCG10G011620 Citrullus lanatus HOM05D007717 ORTHO05D009694 7.5e-88 327.8 221 71.0
GSVIVG01028159001 Vitis vinifera HOM05D007717 ORTHO05D009694 9.8e-88 327.4 219 70.3
EL10As5g23606 Beta vulgaris HOM05D007717 ORTHO05D009694 2.8e-87 325.9 213 71.4
Rhsim13G0002400 Rhododendron simsii HOM05D007717 ORTHO05D009694 4.9e-87 325.1 251 63.3
CSS0048227 Camellia sinensis var. sinensis HOM05D007717 ORTHO05D009694 6.3e-87 324.7 221 68.3
TWI14G0584 Tripterygium wilfordii HOM05D007717 ORTHO05D009694 1.4e-86 323.6 249 64.3
CsaV3_3G026540 Cucumis sativus L. HOM05D007717 ORTHO05D009694 3.1e-86 322.4 243 65.8
Atru.chr5.944 Acer truncatum HOM05D007717 ORTHO05D009694 5.4e-86 321.6 215 71.2
MELO3C012927.2 Cucumis melo HOM05D007717 ORTHO05D009694 1.0e-84 317.4 259 62.9
Duzib138G0230 Durio zibethinus HOM05D007717 ORTHO05D009694 1.0e-84 317.4 218 69.7
Manes.05G012500 Manihot esculenta HOM05D007717 ORTHO05D009694 1.0e-84 317.4 218 70.2
Ciclev10021685m.g Citrus clementina HOM05D007717 ORTHO05D009694 1.3e-84 317.0 253 64.0
Hma1.2p1_0408F.1_g146470 Hydrangea macrophylla HOM05D007717 ORTHO05D009694 1.3e-84 317.0 209 69.4
Thecc.01G318800 Theobroma cacao HOM05D007717 ORTHO05D009694 2.3e-84 316.2 233 67.4
Sed0016465 Sechium edule HOM05D007717 ORTHO05D009694 5.0e-84 315.1 234 67.5
A07p34270 Brassica napus HOM05D007717 ORTHO05D009694 8.6e-84 314.3 235 66.0
Carub.0006s3530 Capsella rubella HOM05D007717 ORTHO05D009694 1.9e-83 313.2 225 67.1
Sp6g01810 Schrenkiella parvula HOM05D007717 ORTHO05D009694 1.9e-83 313.2 246 63.4
C06p42310 Brassica napus HOM05D007717 ORTHO05D009694 2.5e-83 312.8 218 68.3
BraA07t31055Z Brassica rapa HOM05D007717 ORTHO05D009694 2.5e-83 312.8 235 65.5
Thhalv10028874m.g Eutrema salsugineum HOM05D007717 ORTHO05D009694 2.5e-83 312.8 213 70.0
ECA236G3512 Erigeron canadensis HOM05D007717 ORTHO05D009694 4.3e-83 312.0 212 71.2
Prupe.3G006900 Prunus persica HOM05D007717 ORTHO05D009694 9.5e-83 310.8 266 60.2
MD09G1286700 Malus domestica HOM05D007717 ORTHO05D009694 1.2e-82 310.5 249 61.0
AT4G01935 Arabidopsis thaliana HOM05D007717 ORTHO05D009694 1.6e-82 310.1 218 69.3
BolC6t39198H Brassica oleracea HOM05D007717 ORTHO05D009694 1.6e-82 310.1 218 67.0
RcHm_v2.0_Chr3g0487001 Rosa chinensis HOM05D007717 ORTHO05D009694 1.6e-82 310.1 198 72.7
Gohir.D07G134000 Gossypium hirsutum HOM05D007717 ORTHO05D009694 3.6e-82 308.9 206 69.9
Gorai.001G145600 Gossypium raimondii HOM05D007717 ORTHO05D009694 3.6e-82 308.9 206 69.9
FvH4_1g26780 Fragaria vesca HOM05D007717 ORTHO05D009694 6.1e-82 308.1 233 63.9
HanXRQChr04g0106271 Helianthus annuus HOM05D007717 ORTHO05D009694 1.4e-81 307.0 227 66.1
AUR62024600 Chenopodium quinoa HOM05D007717 ORTHO05D009694 6.8e-81 304.7 213 65.3
FAN19G0412 Fragaria x ananassa HOM05D007717 ORTHO05D009694 6.8e-81 304.7 235 63.8
Oeu038956.1 Olea europaea HOM05D007717 ORTHO05D009694 1.5e-80 303.5 217 68.2
PSO210G2166 Papaver somniferum HOM05D007717 ORTHO05D009694 1.5e-80 303.5 235 63.0
Migut.N00924 Erythranthe guttata HOM05D007717 ORTHO05D009694 1.3e-79 300.4 238 64.7
Aa31LG5G1580 Aethionema arabicum HOM05D007717 ORTHO05D009694 2.2e-79 299.7 210 68.1
THA.LOC104825934 Tarenaya hassleriana HOM05D007717 ORTHO05D009694 4.9e-79 298.5 239 61.5
Eucgr.K03559 Eucalyptus grandis HOM05D007717 ORTHO05D009694 6.4e-79 298.1 253 62.5
ATR0693G230 Amborella trichopoda HOM05D007717 ORTHO05D009694 7.0e-78 294.7 214 65.0
SGA_v2.0_scaffold198G41108 Striga asiatica HOM05D007717 ORTHO05D009694 6.0e-77 291.6 234 60.7
Nitab4.5_0002828g0050 Nicotiana tabacum HOM05D007717 ORTHO05D009694 1.7e-76 290.0 250 59.6
SalBow2G0697 Salvia bowleyana HOM05D007717 ORTHO05D009694 6.6e-76 288.1 204 66.2
Nitab4.5_0004006g0040 Nicotiana tabacum HOM05D007717 ORTHO05D009694 1.9e-75 286.6 267 56.9
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 2.5e-75 286.2 190 70.0
unitig_748.g7768 Utricularia gibba HOM05D007717 ORTHO05D009694 7.3e-75 284.6 197 68.5
Sabra14G0087200 Salix brachista HOM05D007717 ORTHO05D009694 1.6e-74 283.5 198 69.7
MSTRG.15592 Avicennia marina HOM05D007717 ORTHO05D009694 3.1e-73 279.3 199 66.8
Cc01_g21670 Coffea canephora HOM05D007717 ORTHO05D009694 2.6e-72 276.2 198 66.2
CAN.G1209.17 Capsicum annuum HOM05D007717 ORTHO05D009694 2.7e-69 266.2 194 67.0
BcaB04g18936 Brassica carinata HOM05D007717 ORTHO05D009694 1.7e-68 263.5 207 61.8
PGR044G1932 Punica granatum HOM05D007717 ORTHO05D009694 1.9e-67 260.0 199 65.8
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 9.5e-67 257.7 182 67.6
Lj2C1210T5 Lonicera japonica HOM05D007717 ORTHO05D009694 1.1e-65 254.2 207 62.8
Os01g0252600 Oryza sativa ssp. japonica HOM05D007717 ORTHO05D009694 5.2e-65 251.9 206 56.3
Zm00001eb127510 Zea mays HOM05D007717 ORTHO05D009694 5.4e-62 241.9 197 58.9
arahy.Tifrunner.gnm1.ann1.259I69 Arachis hypogaea HOM05D007717 ORTHO05D009694 2.3e-60 236.5 260 53.5
Nn3g21819 Nelumbo nucifera HOM05D007717 ORTHO05D009694 2.3e-60 236.5 190 64.2
Mapoly0015s0128 Marchantia polymorpha HOM05D007717 ORTHO05D009694 3.9e-60 235.7 199 56.8
AagrBONN_evm.TU.Sc2ySwM_344.3558 Anthoceros agrestis HOM05D007717 ORTHO05D009694 4.3e-59 232.3 205 56.6
Ah.11g049130 Amaranthus hybridus HOM05D007717 ORTHO05D009694 1.6e-58 230.3 221 52.5
Pp3c5_22240 Physcomitrium patens HOM05D007717 ORTHO05D009694 8.1e-58 228.0 195 57.9
AUR62011755 Chenopodium quinoa HOM05D004146 ORTHO05D004843 2.2e-55 219.9 149 67.1
Hund02948 Selenicereus undatus HOM05D007717 ORTHO05D009694 6.4e-55 218.4 169 66.3
Dinv00087 Davidia involucrata HOM05D007717 ORTHO05D009694 7.8e-53 211.5 150 66.7
SMO117G0327 Selaginella moellendorffii HOM05D007717 ORTHO05D009694 9.6e-51 204.5 195 52.8
MBI18_g27382_MAGBIO Magnolia biondii HOM05D007717 ORTHO05D009694 6.4e-47 191.8 213 48.4
Gohir.A07G129700 Gossypium hirsutum HOM05D007717 ORTHO05D009694 4.3e-43 179.1 135 63.7
BcaC08g46194 Brassica carinata HOM05D007717 ORTHO05D009694 7.3e-43 178.3 96 79.2
Actinidia37701 Actinidia chinensis HOM05D007717 ORTHO05D009694 7.1e-38 161.8 169 53.3
vmacro02381 Vaccinium macrocarpon HOM05D007717 ORTHO05D009694 1.9e-35 153.7 121 64.5
Cpa.g.sc18.99 Carica papaya HOM05D007717 ORTHO05D009694 2.4e-33 146.7 104 71.2
FAN23G2736 Fragaria x ananassa HOM05D007717 ORTHO05D009694 3.2e-30 136.3 85 72.9
FAN28G2335 Fragaria x ananassa HOM05D007717 ORTHO05D009694 1.3e-28 131.0 128 52.3
BcaC08g46195 Brassica carinata HOM05D007717 ORTHO05D009694 4.3e-27 125.9 100 62.0
Sc17g0000260 Simmondsia chinensis HOM05D007717 ORTHO05D009694 7.6e-24 115.2 102 55.9
Cre17.g729900 Chlamydomonas reinhardtii HOM05D007717 ORTHO05D009694 2.5e-22 110.2 198 36.4
CARHR249750 Cardamine hirsuta HOM05D007717 ORTHO05D009694 1.0e-15 88.2 74 60.8
CBR_g40482 Chara braunii HOM05D001161 ORTHO05D000497 1.4e-09 67.8 108 37.0


User provided reference genes

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