Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01036042001 Vitis vinifera HOM05D004547 ORTHO05D005133 1.9e-74 282.3 136 100.0
GSVIVG01018659001 Vitis vinifera HOM05D004547 ORTHO05D005133 2.6e-31 139.0 144 56.9
Oeu022486.1 Olea europaea HOM05D004547 ORTHO05D005133 2.3e-27 125.9 142 50.7
Atru.chr1.728 Acer truncatum HOM05D004547 ORTHO05D005133 3.9e-27 125.2 140 51.4
CSS0028755 Camellia sinensis var. sinensis HOM05D004547 ORTHO05D005133 5.1e-27 124.8 144 49.3
TAR375G0699 Trochodendron aralioides HOM05D004547 ORTHO05D005133 5.1e-27 124.8 143 51.0
Prupe.2G277000 Prunus persica HOM05D004547 ORTHO05D005133 6.7e-27 124.4 142 50.0
Cc02_g04280 Coffea canephora HOM05D004547 ORTHO05D005133 1.1e-26 123.6 141 50.4
Gohir.D12G200900 Gossypium hirsutum HOM05D004547 ORTHO05D005133 1.1e-26 123.6 142 51.4
Gohir.A12G198300 Gossypium hirsutum HOM05D004547 ORTHO05D005133 1.5e-26 123.2 142 51.4
Gorai.008G216000 Gossypium raimondii HOM05D004547 ORTHO05D005133 1.5e-26 123.2 142 51.4
Hma1.2p1_0432F.1_g151760 Hydrangea macrophylla HOM05D004547 ORTHO05D005133 1.5e-26 123.2 140 54.3
QL09p005748 Quercus lobata HOM05D004547 ORTHO05D005133 1.5e-26 123.2 142 50.0
Duzib205G1908 Durio zibethinus HOM05D004547 ORTHO05D005133 3.3e-26 122.1 142 50.7
Ciclev10004313m.g Citrus clementina HOM05D004547 ORTHO05D005133 4.3e-26 121.7 142 51.4
DCAR_020189 Daucus carota HOM05D004547 ORTHO05D005133 4.3e-26 121.7 144 50.0
Lj1A979T84 Lonicera japonica HOM05D004547 ORTHO05D005133 4.3e-26 121.7 140 50.0
MD01G1182800 Malus domestica HOM05D004547 ORTHO05D005133 4.3e-26 121.7 140 50.7
Nn1g01023 Nelumbo nucifera HOM05D004547 ORTHO05D005133 4.3e-26 121.7 144 49.3
CANSAT56G3837 Cannabis sativa HOM05D004547 ORTHO05D005133 7.4e-26 120.9 140 51.4
Dinv28576 Davidia involucrata HOM05D004547 ORTHO05D005133 7.4e-26 120.9 144 49.3
ATR0317G078 Amborella trichopoda HOM05D004547 ORTHO05D005133 1.6e-25 119.8 144 49.3
RcHm_v2.0_Chr1g0374281 Rosa chinensis HOM05D004547 ORTHO05D005133 1.6e-25 119.8 142 47.9
TAR374G0871 Trochodendron aralioides HOM05D004547 ORTHO05D005133 1.6e-25 119.8 142 50.0
ECA232G2122 Erigeron canadensis HOM05D004547 ORTHO05D005133 2.2e-25 119.4 144 48.6
Eucgr.A02893 Eucalyptus grandis HOM05D004547 ORTHO05D005133 2.2e-25 119.4 144 47.2
HanXRQChr16g0512771 Helianthus annuus HOM05D004547 ORTHO05D005133 2.2e-25 119.4 144 48.6
Thecc.03G155600 Theobroma cacao HOM05D004547 ORTHO05D005133 2.8e-25 119.0 142 50.0
COL.COLO4_14121 Corchorus olitorius HOM05D004547 ORTHO05D005133 4.8e-25 118.2 142 52.1
Manes.06G134600 Manihot esculenta HOM05D004547 ORTHO05D005133 4.8e-25 118.2 142 50.0
CiPaw.03G093300 Carya illinoinensis HOM05D004547 ORTHO05D005133 6.3e-25 117.9 142 49.3
Hund13892 Selenicereus undatus HOM05D004547 ORTHO05D005133 6.3e-25 117.9 156 47.4
Cfa008167 Carpinus fangiana HOM05D004547 ORTHO05D005133 8.2e-25 117.5 142 48.6
FvH4_7g27490 Fragaria vesca HOM05D004547 ORTHO05D005133 8.2e-25 117.5 142 47.9
FAN01G0567 Fragaria x ananassa HOM05D004547 ORTHO05D005133 8.2e-25 117.5 142 47.9
FAN03G1184 Fragaria x ananassa HOM05D004547 ORTHO05D005133 8.2e-25 117.5 142 47.9
PGR042G2008 Punica granatum HOM05D004547 ORTHO05D005133 8.2e-25 117.5 140 49.3
Potri.003G109100 Populus trichocarpa HOM05D004547 ORTHO05D005133 1.1e-24 117.1 141 49.6
Cpa.g.sc3.324 Carica papaya HOM05D004547 ORTHO05D005133 1.4e-24 116.7 143 50.3
Lsat_1_v5_gn_9_52061 Lactuca sativa HOM05D004547 ORTHO05D005133 1.8e-24 116.3 144 47.2
Medtr0004s0490 Medicago truncatula HOM05D004547 ORTHO05D005133 1.8e-24 116.3 142 49.3
Medtr6g005670 Medicago truncatula HOM05D004547 ORTHO05D005133 2.4e-24 115.9 134 53.0
CDE04G0650 Ceratophyllum demersum HOM05D004547 ORTHO05D005133 3.1e-24 115.5 150 46.7
MD07G1253600 Malus domestica HOM05D004547 ORTHO05D005133 3.1e-24 115.5 139 48.2
PSO266G0090 Papaver somniferum HOM05D004547 ORTHO05D005133 5.3e-24 114.8 144 48.6
PSO384G4058 Papaver somniferum HOM05D004547 ORTHO05D005133 5.3e-24 114.8 144 48.6
arahy.Tifrunner.gnm1.ann1.J7T2TK Arachis hypogaea HOM05D004547 ORTHO05D005133 6.9e-24 114.4 140 50.0
arahy.Tifrunner.gnm1.ann1.TL2CDN Arachis hypogaea HOM05D004547 ORTHO05D005133 6.9e-24 114.4 140 50.0
Sabra03G0075600 Salix brachista HOM05D004547 ORTHO05D005133 6.9e-24 114.4 141 48.9
Sed0001089 Sechium edule HOM05D004547 ORTHO05D005133 6.9e-24 114.4 152 45.4
SGA_v2.0_scaffold44G16547 Striga asiatica HOM05D004547 ORTHO05D005133 6.9e-24 114.4 140 49.3
vmacro06799 Vaccinium macrocarpon HOM05D004547 ORTHO05D005133 6.9e-24 114.4 138 50.7
FAN06G1879 Fragaria x ananassa HOM05D004547 ORTHO05D005133 9.0e-24 114.0 142 47.2
TPR.G20262 Trifolium pratense HOM05D004547 ORTHO05D005133 9.0e-24 114.0 142 48.6
Ca_19628_v3 Cicer arietinum L. HOM05D004547 ORTHO05D005133 1.2e-23 113.6 142 49.3
Migut.F00479 Erythranthe guttata HOM05D004547 ORTHO05D005133 1.2e-23 113.6 140 48.6
CsaV3_3G016130 Cucumis sativus L. HOM05D004547 ORTHO05D005133 1.5e-23 113.2 152 45.4
Rhsim03G0167200 Rhododendron simsii HOM05D004547 ORTHO05D005133 1.5e-23 113.2 138 49.3
Actinidia31780 Actinidia chinensis HOM05D004547 ORTHO05D005133 2.0e-23 112.8 142 46.5
EL10Ac2g04890 Beta vulgaris HOM05D004547 ORTHO05D005133 2.0e-23 112.8 142 47.9
MELO3C006811.2 Cucumis melo HOM05D004547 ORTHO05D005133 2.0e-23 112.8 150 45.3
Glyma.12G013000 Glycine max HOM05D004547 ORTHO05D005133 2.0e-23 112.8 142 48.6
unitig_37.g11930 Utricularia gibba HOM05D004547 ORTHO05D005133 2.0e-23 112.8 150 44.7
Peaxi162Scf00023g01214 Petunia axillaris HOM05D004547 ORTHO05D005133 2.6e-23 112.5 139 47.5
BcaB08g35501 Brassica carinata HOM05D004547 ORTHO05D005133 3.4e-23 112.1 145 46.9
ClCG05G007360 Citrullus lanatus HOM05D004547 ORTHO05D005133 3.4e-23 112.1 152 44.7
Medtr6g005610 Medicago truncatula HOM05D004547 ORTHO05D005133 3.4e-23 112.1 148 45.9
Phvul.011G016000 Phaseolus vulgaris HOM05D004547 ORTHO05D005133 3.4e-23 112.1 142 47.9
Sc14g0005530 Simmondsia chinensis HOM05D004547 ORTHO05D005133 3.4e-23 112.1 142 47.2
Sopen05g002910 Solanum pennellii HOM05D004547 ORTHO05D005133 5.9e-23 111.3 141 46.8
PGSC0003DMG400017618 Solanum tuberosum HOM05D004547 ORTHO05D005133 5.9e-23 111.3 139 48.2
BcaC04g20676 Brassica carinata HOM05D004547 ORTHO05D005133 7.6e-23 110.9 145 46.2
A10p09160 Brassica napus HOM05D004547 ORTHO05D005133 7.6e-23 110.9 145 46.2
A10p09340 Brassica napus HOM05D004547 ORTHO05D005133 7.6e-23 110.9 145 46.2
C09p40720 Brassica napus HOM05D004547 ORTHO05D005133 7.6e-23 110.9 145 46.2
BolC9t56951H Brassica oleracea HOM05D004547 ORTHO05D005133 7.6e-23 110.9 145 46.2
BraA10t43010Z Brassica rapa HOM05D004547 ORTHO05D005133 7.6e-23 110.9 145 46.2
THA.LOC104811522 Tarenaya hassleriana HOM05D004547 ORTHO05D005133 7.6e-23 110.9 145 46.2
Psat0s2825g0040 Pisum sativum HOM05D004547 ORTHO05D005133 1.0e-22 110.5 142 47.9
AL8G25720 Arabidopsis lyrata HOM05D004547 ORTHO05D005133 1.3e-22 110.2 145 45.5
Carub.0008s1145 Capsella rubella HOM05D004547 ORTHO05D005133 1.3e-22 110.2 145 45.5
CARHR264160 Cardamine hirsuta HOM05D004547 ORTHO05D005133 1.3e-22 110.2 145 45.5
Lalb_Chr03g0024271 Lupinus albus HOM05D004547 ORTHO05D005133 1.3e-22 110.2 142 47.2
CAN.G16.15 Capsicum annuum HOM05D004547 ORTHO05D005133 1.7e-22 109.8 142 44.4
Thhalv10012691m.g Eutrema salsugineum HOM05D004547 ORTHO05D005133 1.7e-22 109.8 145 45.5
Lj3g0004511 Lotus japonicus HOM05D004547 ORTHO05D005133 1.7e-22 109.8 142 49.3
Sp6g13590 Schrenkiella parvula HOM05D004547 ORTHO05D005133 1.7e-22 109.8 145 45.5
AT5G51430 Arabidopsis thaliana HOM05D004547 ORTHO05D005133 2.2e-22 109.4 145 44.8
BcaC03g14608 Brassica carinata HOM05D004547 ORTHO05D005133 2.2e-22 109.4 145 45.5
A02p12350 Brassica napus HOM05D004547 ORTHO05D005133 2.2e-22 109.4 145 45.5
BolC2t08183H Brassica oleracea HOM05D004547 ORTHO05D005133 2.2e-22 109.4 145 45.5
Aa31sc202G10 Aethionema arabicum HOM05D004547 ORTHO05D005133 2.9e-22 109.0 142 44.4
C02p20480 Brassica napus HOM05D004547 ORTHO05D005133 2.9e-22 109.0 145 44.8
TWI39G0203 Tripterygium wilfordii HOM05D004547 ORTHO05D005133 2.9e-22 109.0 140 49.3
MSTRG.8826 Avicennia marina HOM05D004547 ORTHO05D005133 3.8e-22 108.6 141 45.4
SalBow5G1900 Salvia bowleyana HOM05D004547 ORTHO05D005133 3.8e-22 108.6 157 43.3
SalBow5G5604 Salvia bowleyana HOM05D004547 ORTHO05D005133 3.8e-22 108.6 157 43.3
VMungo1127G1242 Vigna mungo HOM05D004547 ORTHO05D005133 3.8e-22 108.6 142 48.6
Glyma.09G224000 Glycine max HOM05D004547 ORTHO05D005133 5.0e-22 108.2 142 47.2
Sed0008837 Sechium edule HOM05D004547 ORTHO05D005133 5.0e-22 108.2 152 44.1
Nitab4.5_0000895g0220 Nicotiana tabacum HOM05D004547 ORTHO05D005133 6.5e-22 107.8 141 44.7
Nitab4.5_0004665g0060 Nicotiana tabacum HOM05D004547 ORTHO05D005133 6.5e-22 107.8 141 45.4
AUR62022938 Chenopodium quinoa HOM05D004547 ORTHO05D005133 8.5e-22 107.5 157 42.0
Aqoxy2G03231 Aquilegia oxysepala HOM05D004547 ORTHO05D005133 1.1e-21 107.1 144 44.4
Zm00001eb389950 Zea mays HOM05D004547 ORTHO05D005133 5.5e-21 104.8 142 43.7
Ah.10g036230 Amaranthus hybridus HOM05D004547 ORTHO05D005133 3.6e-20 102.1 57 84.2
AUR62012299 Chenopodium quinoa HOM05D004547 ORTHO05D005133 6.1e-20 101.3 57 78.9
CARHR150020 Cardamine hirsuta HOM05D004547 ORTHO05D005133 1.4e-19 100.1 150 44.0
SEGI_24302 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 6.3e-17 91.3 71 66.2
SMO134G0015 Selaginella moellendorffii HOM05D004547 ORTHO05D005133 3.8e-14 82.0 141 37.6
Mapoly0007s0274 Marchantia polymorpha HOM05D004547 ORTHO05D005133 1.4e-13 80.1 67 58.2
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 1.6e-12 76.6 61 60.7
Oeu042559.1 Olea europaea HOM05D004547 ORTHO05D005133 4.7e-12 75.1 99 46.5
Pp3c7_60 Physcomitrium patens HOM05D004547 ORTHO05D005133 6.1e-12 74.7 61 60.7
HPP92_005328 Vanilla planifolia HOM05D004547 ORTHO05D005133 2.3e-11 72.8 119 40.3
HPP92_005318 Vanilla planifolia HOM05D004547 ORTHO05D005133 1.5e-10 70.1 44 72.7
PRCOL_00005609 Prasinoderma coloniale HOM05D004547 ORTHO05D005133 2.0e-07 59.7 78 47.4


User provided reference genes

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