Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01034997001 Vitis vinifera HOM05D006900 ORTHO05D008651 2.2e-216 756.1 652 100.0
TAR362G0296 Trochodendron aralioides HOM05D006900 ORTHO05D008651 6.5e-112 409.1 665 74.6
MD13G1154800 Malus domestica HOM05D006900 ORTHO05D008651 1.6e-110 404.4 632 77.4
Dinv15174 Davidia involucrata HOM05D006900 ORTHO05D008651 1.1e-108 398.3 551 84.4
Hma1.2p1_0013F.1_g008570 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 5.7e-108 396.0 658 74.6
Thecc.04G300100 Theobroma cacao HOM05D006900 ORTHO05D008651 5.7e-108 396.0 663 74.7
Prupe.1G117800 Prunus persica HOM05D006900 ORTHO05D008651 1.3e-107 394.8 650 75.5
Actinidia13360 Actinidia chinensis HOM05D006900 ORTHO05D008651 8.2e-107 392.1 672 73.8
PGR004G2297 Punica granatum HOM05D006900 ORTHO05D008651 1.8e-106 391.0 648 75.5
CSS0034541 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 4.1e-106 389.8 663 74.1
QL06p012004 Quercus lobata HOM05D006900 ORTHO05D008651 9.1e-106 388.7 647 74.2
Cfa015319 Carpinus fangiana HOM05D006900 ORTHO05D008651 4.5e-105 386.3 641 76.1
Duzib212G0988 Durio zibethinus HOM05D006900 ORTHO05D008651 5.0e-104 382.9 639 74.8
Nn3g21725 Nelumbo nucifera HOM05D006900 ORTHO05D008651 6.5e-104 382.5 674 72.8
Haze_01304 Corylus avellana HOM05D006900 ORTHO05D008651 5.5e-103 379.4 642 76.0
Gorai.011G199800 Gossypium raimondii HOM05D006900 ORTHO05D008651 8.0e-102 375.6 647 73.7
Peaxi162Scf00681g00223 Petunia axillaris HOM05D006900 ORTHO05D008651 3.0e-101 373.6 667 71.4
Gohir.A10G171600 Gossypium hirsutum HOM05D006900 ORTHO05D008651 6.8e-101 372.5 646 73.5
Solyc04g009020.4 Solanum lycopersicum HOM05D006900 ORTHO05D008651 8.8e-101 372.1 673 70.9
PGSC0003DMG400011531 Solanum tuberosum HOM05D006900 ORTHO05D008651 2.0e-100 370.9 673 71.0
Gohir.D10G178700 Gossypium hirsutum HOM05D006900 ORTHO05D008651 2.6e-100 370.5 648 73.8
CAN.G274.12 Capsicum annuum HOM05D006900 ORTHO05D008651 5.7e-100 369.4 677 71.0
Lj4g0008712 Lotus japonicus HOM05D006900 ORTHO05D008651 9.8e-100 368.6 641 73.8
Cc03_g00870 Coffea canephora HOM05D006900 ORTHO05D008651 8.3e-99 365.5 665 72.0
COL.COLO4_34620 Corchorus olitorius HOM05D006900 ORTHO05D008651 8.3e-99 365.5 607 76.8
Lj6A690T75 Lonicera japonica HOM05D006900 ORTHO05D008651 8.3e-99 365.5 644 73.4
Sopen04g004200 Solanum pennellii HOM05D006900 ORTHO05D008651 8.3e-99 365.5 673 70.3
Manes.03G204600 Manihot esculenta HOM05D006900 ORTHO05D008651 1.8e-98 364.4 658 72.5
TWI09G0824 Tripterygium wilfordii HOM05D006900 ORTHO05D008651 1.8e-98 364.4 654 72.5
arahy.Tifrunner.gnm1.ann1.Z0RY6M Arachis hypogaea HOM05D006900 ORTHO05D008651 7.0e-98 362.5 643 74.5
arahy.Tifrunner.gnm1.ann1.88EKIY Arachis hypogaea HOM05D006900 ORTHO05D008651 2.0e-97 360.9 644 73.8
Nitab4.5_0004979g0030 Nicotiana tabacum HOM05D006900 ORTHO05D008651 1.7e-96 357.8 690 69.4
ClCG05G006560 Citrullus lanatus HOM05D006900 ORTHO05D008651 6.5e-96 355.9 650 72.0
Sabra10G0112000 Salix brachista HOM05D006900 ORTHO05D008651 1.9e-95 354.4 642 73.7
FAN07G1219 Fragaria x ananassa HOM05D006900 ORTHO05D008651 5.5e-95 352.8 619 74.5
Nitab4.5_0010299g0060 Nicotiana tabacum HOM05D006900 ORTHO05D008651 5.5e-95 352.8 712 54.5
Lalb_Chr07g0182071 Lupinus albus HOM05D006900 ORTHO05D008651 9.5e-95 352.1 631 73.4
RcHm_v2.0_Chr4g0425111 Rosa chinensis HOM05D006900 ORTHO05D008651 6.1e-94 349.4 640 73.6
THA.LOC104820304 Tarenaya hassleriana HOM05D006900 ORTHO05D008651 8.0e-94 349.0 645 73.2
CsaV3_3G015170 Cucumis sativus L. HOM05D006900 ORTHO05D008651 1.8e-93 347.8 636 72.3
MELO3C006715.2 Cucumis melo HOM05D006900 ORTHO05D008651 4.0e-93 346.7 636 72.2
Medtr4g122060 Medicago truncatula HOM05D006900 ORTHO05D008651 8.8e-93 345.5 635 71.7
Atru.chr4.3007 Acer truncatum HOM05D006900 ORTHO05D008651 1.5e-92 344.7 643 72.6
Glyma.07G240000 Glycine max HOM05D006900 ORTHO05D008651 1.5e-92 344.7 635 72.8
Potri.010G145000 Populus trichocarpa HOM05D006900 ORTHO05D008651 2.0e-92 344.4 642 72.0
Psat0s740g0280 Pisum sativum HOM05D006900 ORTHO05D008651 5.7e-92 342.8 562 76.3
Eucgr.H04042 Eucalyptus grandis HOM05D006900 ORTHO05D008651 7.5e-92 342.4 575 68.0
Ciclev10004521m.g Citrus clementina HOM05D006900 ORTHO05D008651 9.8e-92 342.0 628 74.0
VMungo1215G0487 Vigna mungo HOM05D006900 ORTHO05D008651 2.8e-91 340.5 646 70.1
Migut.G00056 Erythranthe guttata HOM05D006900 ORTHO05D008651 4.9e-91 339.7 632 72.8
CiPaw.02G075100 Carya illinoinensis HOM05D006900 ORTHO05D008651 8.3e-91 339.0 605 75.2
PSO357G0537 Papaver somniferum HOM05D006900 ORTHO05D008651 1.1e-90 338.6 679 69.4
FvH4_4g19660 Fragaria vesca HOM05D006900 ORTHO05D008651 2.4e-90 337.4 623 73.7
FAN12G3178 Fragaria x ananassa HOM05D006900 ORTHO05D008651 9.2e-90 335.5 624 73.1
Thhalv10020271m.g Eutrema salsugineum HOM05D006900 ORTHO05D008651 1.2e-89 335.1 638 72.7
Glyma.17G033400 Glycine max HOM05D006900 ORTHO05D008651 7.7e-89 332.4 639 71.4
PSO170G0176 Papaver somniferum HOM05D006900 ORTHO05D008651 1.0e-88 332.0 678 69.2
MSTRG.10150 Avicennia marina HOM05D006900 ORTHO05D008651 1.3e-88 331.6 650 70.9
Rhsim02G0004000 Rhododendron simsii HOM05D006900 ORTHO05D008651 1.3e-88 331.6 711 46.0
Carub.0003s1679 Capsella rubella HOM05D006900 ORTHO05D008651 5.0e-88 329.7 634 73.0
unitig_748.g8700 Utricularia gibba HOM05D006900 ORTHO05D008651 5.0e-88 329.7 619 72.2
Ah.04g156910 Amaranthus hybridus HOM05D006900 ORTHO05D008651 1.5e-87 328.2 644 71.6
vmacro15184 Vaccinium macrocarpon HOM05D006900 ORTHO05D008651 1.5e-87 328.2 685 68.6
HanXRQChr13g0393421 Helianthus annuus HOM05D006900 ORTHO05D008651 2.5e-87 327.4 641 71.0
CARHR092290 Cardamine hirsuta HOM05D006900 ORTHO05D008651 5.6e-87 326.2 634 71.8
TPR.G16830 Trifolium pratense HOM05D006900 ORTHO05D008651 2.8e-86 323.9 639 59.2
C05p49400 Brassica napus HOM05D006900 ORTHO05D008651 8.0e-86 322.4 639 71.4
Aqoxy5G02843 Aquilegia oxysepala HOM05D006900 ORTHO05D008651 1.0e-85 322.0 540 78.9
A05p32690 Brassica napus HOM05D006900 ORTHO05D008651 1.0e-85 322.0 643 70.9
BraA05t22092Z Brassica rapa HOM05D006900 ORTHO05D008651 1.0e-85 322.0 637 71.4
AL3G30020 Arabidopsis lyrata HOM05D006900 ORTHO05D008651 1.4e-85 321.6 634 72.2
BcaB06g25797 Brassica carinata HOM05D006900 ORTHO05D008651 1.4e-85 321.6 567 76.2
Lsat_1_v5_gn_6_18120 Lactuca sativa HOM05D006900 ORTHO05D008651 1.4e-85 321.6 653 70.3
BcaC05g28835 Brassica carinata HOM05D006900 ORTHO05D008651 8.9e-85 318.9 637 71.1
BolC5t33686H Brassica oleracea HOM05D006900 ORTHO05D008651 8.9e-85 318.9 637 71.1
AUR62039284 Chenopodium quinoa HOM05D006900 ORTHO05D008651 1.2e-84 318.5 512 82.2
Sp3g15260 Schrenkiella parvula HOM05D006900 ORTHO05D008651 1.2e-84 318.5 647 70.8
Aa31LG8G4070 Aethionema arabicum HOM05D006900 ORTHO05D008651 3.4e-84 317.0 659 69.5
SGA_v2.0_scaffold104G30080 Striga asiatica HOM05D006900 ORTHO05D008651 3.4e-84 317.0 657 68.6
AUR62016204 Chenopodium quinoa HOM05D006900 ORTHO05D008651 7.5e-84 315.8 512 81.8
CANSAT64G2951 Cannabis sativa HOM05D006900 ORTHO05D008651 1.1e-82 312.0 632 71.2
CDE12G0762 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 1.8e-82 311.2 625 71.0
MBI18_g32026_MAGBIO Magnolia biondii HOM05D006900 ORTHO05D008651 5.4e-82 309.7 663 68.9
ATR0693G010 Amborella trichopoda HOM05D006900 ORTHO05D008651 7.0e-82 309.3 645 71.0
Phvul.003G114100 Phaseolus vulgaris HOM05D006900 ORTHO05D008651 2.3e-80 304.3 642 69.3
Sc15g0003210 Simmondsia chinensis HOM05D006900 ORTHO05D008651 4.7e-78 296.6 638 71.3
ECA233G1261 Erigeron canadensis HOM05D006900 ORTHO05D008651 2.0e-76 291.2 649 69.3
Sed0008833 Sechium edule HOM05D006900 ORTHO05D008651 2.6e-76 290.8 548 76.8
EL10Ac3g05503 Beta vulgaris HOM05D006900 ORTHO05D008651 3.7e-75 287.0 634 38.2
Ca_21442_v3 Cicer arietinum L. HOM05D006900 ORTHO05D008651 4.1e-74 283.5 253 61.3
DCAR_030472 Daucus carota HOM05D006900 ORTHO05D008651 9.5e-71 272.3 620 64.2
Zm00001eb014810 Zea mays HOM05D006900 ORTHO05D008651 2.8e-70 270.8 534 76.6
Hund03124 Selenicereus undatus HOM05D006900 ORTHO05D008651 1.1e-69 268.9 709 59.2
Hma1.2p1_0013F.1_g008580 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 4.9e-67 260.0 233 62.2
CDE01G0483 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 7.1e-66 256.1 252 57.5
SalBow8G4068 Salvia bowleyana HOM05D006900 ORTHO05D008651 5.2e-61 240.0 215 59.1
AT3G17040 Arabidopsis thaliana HOM05D006900 ORTHO05D008651 2.0e-60 238.0 278 52.2
Os03g0308800 Oryza sativa ssp. japonica HOM05D006900 ORTHO05D008651 7.1e-50 203.0 162 61.7
SEGI_12330 Sequoiadendron giganteum HOM05D006900 ORTHO05D008651 5.8e-44 183.3 480 75.2
CANSAT78G0722 Cannabis sativa HOM05D006900 ORTHO05D008651 7.1e-42 176.4 245 46.9
Cpa.g.sc9.62 Carica papaya HOM05D006900 ORTHO05D008651 1.9e-39 168.3 180 68.9
Mapoly0078s0010 Marchantia polymorpha HOM05D006900 ORTHO05D008651 1.3e-35 155.6 110 64.5
Gohir.A10G171900 Gossypium hirsutum HOM05D006900 ORTHO05D008651 8.4e-35 152.9 196 48.0
AagrBONN_evm.TU.Sc2ySwM_368.516 Anthoceros agrestis HOM05D006900 ORTHO05D008651 1.6e-33 148.7 150 52.7
Pp3c1_20310 Physcomitrium patens HOM05D006900 ORTHO05D008651 2.8e-30 137.9 110 59.1
Cpa.g.sc9.61 Carica papaya HOM05D006900 ORTHO05D008651 1.8e-29 135.2 176 52.3
SMO115G0152 Selaginella moellendorffii HOM05D006900 ORTHO05D008651 3.1e-29 134.4 110 60.0
CSS0028196 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 1.5e-28 132.1 80 80.0
CBR_g12177 Chara braunii HOM05D006900 ORTHO05D008651 4.5e-28 130.6 168 44.0
Gohir.A10G171950 Gossypium hirsutum HOM05D006900 ORTHO05D008651 4.5e-28 130.6 107 62.6
CSS0035140 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 1.7e-27 128.6 80 77.5
Oeu032012.1 Olea europaea HOM05D006900 ORTHO05D008651 2.4e-21 108.2 98 61.2
Cre09.g416200 Chlamydomonas reinhardtii HOM05D006900 ORTHO05D008651 2.7e-17 94.7 127 38.6
MCO01G208 Micromonas commoda HOM05D006900 ORTHO05D008651 4.3e-15 87.4 120 39.2
SGA_v2.0_scaffold157G37400 Striga asiatica HOM05D006900 ORTHO05D008651 9.7e-15 86.3 241 34.0
Oeu032144.1 Olea europaea HOM05D006900 ORTHO05D008651 1.5e-12 79.0 72 88.9
PRCOL_00006040 Prasinoderma coloniale HOM05D001216 ORTHO05D005688 3.4e-12 77.8 112 37.5


User provided reference genes

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