Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01029354001 Vitis vinifera HOM05D002854 ORTHO05D003051 1.1e-19 99.0 51 100.0
CsaV3_1G007440 Cucumis sativus L. HOM05D002854 ORTHO05D003051 1.2e-08 62.4 39 82.1
ClCG01G014880 Citrullus lanatus HOM05D002854 ORTHO05D003051 3.4e-08 60.8 39 79.5
Zm00001eb248250 Zea mays HOM05D002854 ORTHO05D003051 3.4e-08 60.8 39 79.5
MELO3C002161.2 Cucumis melo HOM05D002854 ORTHO05D003051 5.8e-08 60.1 39 79.5
Sed0019664 Sechium edule HOM05D002854 ORTHO05D003051 7.6e-08 59.7 39 79.5
Manes.03G067400 Manihot esculenta HOM05D002854 ORTHO05D003051 9.9e-08 59.3 59 52.5
CiPaw.15G085000 Carya illinoinensis HOM05D002854 ORTHO05D003051 1.3e-07 58.9 39 76.9
VMungo0464G1189 Vigna mungo HOM05D002854 ORTHO05D003051 1.3e-07 58.9 39 74.4
Lsat_1_v5_gn_7_11001 Lactuca sativa HOM05D002854 ORTHO05D003051 1.7e-07 58.5 60 50.0
Os03g0219500 Oryza sativa ssp. japonica HOM05D002854 ORTHO05D003051 1.7e-07 58.5 39 74.4
MBI06_g27499_MAGBIO Magnolia biondii HOM05D002854 ORTHO05D003051 4.9e-07 57.0 39 71.8
arahy.Tifrunner.gnm1.ann1.7CFQ9J Arachis hypogaea HOM05D002854 ORTHO05D003051 6.4e-07 56.6 39 69.2
arahy.Tifrunner.gnm1.ann1.PCT0RU Arachis hypogaea HOM05D002854 ORTHO05D003051 6.4e-07 56.6 39 69.2
Ciclev10023008m.g Citrus clementina HOM05D002854 ORTHO05D003051 6.4e-07 56.6 39 69.2
ECA236G1414 Erigeron canadensis HOM05D002854 ORTHO05D003051 6.4e-07 56.6 60 50.0
Phvul.004G141000 Phaseolus vulgaris HOM05D002854 ORTHO05D003051 6.4e-07 56.6 39 71.8
Nn3g18607 Nelumbo nucifera HOM05D002854 ORTHO05D003051 8.4e-07 56.2 39 69.2
DCAR_013998 Daucus carota HOM05D002854 ORTHO05D003051 1.1e-06 55.8 62 51.6
PGR044G0659 Punica granatum HOM05D002854 ORTHO05D003051 1.1e-06 55.8 39 69.2
Lj2g0002625 Lotus japonicus HOM05D002854 ORTHO05D003051 1.4e-06 55.5 61 50.8
Potri.012G036800 Populus trichocarpa HOM05D002854 ORTHO05D003051 1.4e-06 55.5 40 72.5
Sabra12G0025300 Salix brachista HOM05D002854 ORTHO05D003051 1.4e-06 55.5 40 72.5
Eucgr.K02311 Eucalyptus grandis HOM05D002854 ORTHO05D003051 1.9e-06 55.1 39 71.8
Lalb_Chr22g0353941 Lupinus albus HOM05D002854 ORTHO05D003051 1.9e-06 55.1 39 66.7
Glyma.16G214613 Glycine max HOM05D002854 ORTHO05D003051 2.4e-06 54.7 39 66.7
HanXRQChr06g0168501 Helianthus annuus HOM05D002854 ORTHO05D003051 2.4e-06 54.7 60 46.7
Cfa017827 Carpinus fangiana HOM05D002854 ORTHO05D003051 4.2e-06 53.9 39 69.2
Glyma.09G165400 Glycine max HOM05D002854 ORTHO05D003051 4.2e-06 53.9 39 64.1
CANSAT64G1544 Cannabis sativa HOM05D002854 ORTHO05D003051 7.1e-06 53.1 39 71.8
Lj9P413T35 Lonicera japonica HOM05D002854 ORTHO05D003051 7.1e-06 53.1 39 64.1


User provided reference genes

Program Settings