Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01020973001 Vitis vinifera HOM05D003892 ORTHO05D004522 2.4e-96 355.5 180 100.0
GSVIVG01015854001 Vitis vinifera HOM05D003892 ORTHO05D004522 1.4e-69 266.5 233 66.1
QL07p026283 Quercus lobata HOM05D003892 ORTHO05D004522 2.9e-54 215.7 232 53.9
CANSAT64G1569 Cannabis sativa HOM05D003892 ORTHO05D004522 4.7e-52 208.4 233 51.1
TAR633G1336 Trochodendron aralioides HOM05D003892 ORTHO05D004522 4.7e-52 208.4 234 52.1
Cfa017615 Carpinus fangiana HOM05D003892 ORTHO05D004522 7.9e-52 207.6 232 51.3
TAR636G2427 Trochodendron aralioides HOM05D003892 ORTHO05D004522 3.0e-51 205.7 234 51.7
Actinidia03963 Actinidia chinensis HOM05D003892 ORTHO05D004522 1.1e-50 203.8 233 50.6
Haze_20130 Corylus avellana HOM05D003892 ORTHO05D004522 1.3e-49 200.3 255 47.5
Hma1.2p1_0304F.1_g119340 Hydrangea macrophylla HOM05D003892 ORTHO05D004522 2.8e-49 199.1 233 50.6
CSS0037074 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 3.7e-49 198.7 231 49.4
Duzib106G1451 Durio zibethinus HOM05D003892 ORTHO05D004522 3.7e-49 198.7 234 50.4
Sabra06G0153100 Salix brachista HOM05D003892 ORTHO05D004522 8.2e-49 197.6 225 53.3
Duzib128G1914 Durio zibethinus HOM05D003892 ORTHO05D004522 1.8e-48 196.4 234 47.4
Gorai.009G395500 Gossypium raimondii HOM05D003892 ORTHO05D004522 2.4e-48 196.1 234 50.0
Potri.006G199200 Populus trichocarpa HOM05D003892 ORTHO05D004522 5.3e-48 194.9 228 51.8
Gohir.D04G093300 Gossypium hirsutum HOM05D003892 ORTHO05D004522 9.1e-48 194.1 234 49.6
Ciclev10011278m.g Citrus clementina HOM05D003892 ORTHO05D004522 4.5e-47 191.8 234 49.1
Thecc.05G110400 Theobroma cacao HOM05D003892 ORTHO05D004522 4.5e-47 191.8 234 48.3
COL.COLO4_29492 Corchorus olitorius HOM05D003892 ORTHO05D004522 7.7e-47 191.0 233 49.4
Potri.016G065600 Populus trichocarpa HOM05D003892 ORTHO05D004522 1.0e-46 190.7 233 51.1
CiPaw.10G021500 Carya illinoinensis HOM05D003892 ORTHO05D004522 1.3e-46 190.3 229 50.2
Oeu058130.1 Olea europaea HOM05D003892 ORTHO05D004522 3.8e-46 188.7 232 47.4
DCAR_013462 Daucus carota HOM05D003892 ORTHO05D004522 5.0e-46 188.3 233 47.2
Gohir.A04G055942 Gossypium hirsutum HOM05D003892 ORTHO05D004522 2.5e-45 186.0 234 48.7
Lj1C1061G1 Lonicera japonica HOM05D003892 ORTHO05D004522 3.2e-45 185.7 230 47.8
Glyma.03G205000 Glycine max HOM05D003892 ORTHO05D004522 9.4e-45 184.1 233 48.5
Rhsim03G0058500 Rhododendron simsii HOM05D003892 ORTHO05D004522 9.4e-45 184.1 230 47.8
MSTRG.5909 Avicennia marina HOM05D003892 ORTHO05D004522 1.2e-44 183.7 229 47.2
Lj1g0007585 Lotus japonicus HOM05D003892 ORTHO05D004522 1.2e-44 183.7 231 48.9
Manes.08G037500 Manihot esculenta HOM05D003892 ORTHO05D004522 2.7e-44 182.6 234 48.7
Actinidia37779 Actinidia chinensis HOM05D003892 ORTHO05D004522 3.6e-44 182.2 122 73.0
GSVIVG01020966001 Vitis vinifera HOM05D003892 ORTHO05D004522 3.6e-44 182.2 95 96.8
MBI11_g43834_MAGBIO Magnolia biondii HOM05D003892 ORTHO05D004522 3.0e-43 179.1 234 47.0
TWI15G0645 Tripterygium wilfordii HOM05D003892 ORTHO05D004522 3.0e-43 179.1 233 47.2
Glyma.19G202400 Glycine max HOM05D003892 ORTHO05D004522 5.2e-43 178.3 232 47.4
Lalb_Chr01g0017711 Lupinus albus HOM05D003892 ORTHO05D004522 6.7e-43 177.9 235 46.0
AUR62036307 Chenopodium quinoa HOM05D003892 ORTHO05D004522 8.8e-43 177.6 234 44.9
arahy.Tifrunner.gnm1.ann1.IGZ3F9 Arachis hypogaea HOM05D003892 ORTHO05D004522 1.2e-42 177.2 234 46.2
arahy.Tifrunner.gnm1.ann1.H4389H Arachis hypogaea HOM05D003892 ORTHO05D004522 2.0e-42 176.4 236 44.5
arahy.Tifrunner.gnm1.ann1.L9LT45 Arachis hypogaea HOM05D003892 ORTHO05D004522 2.0e-42 176.4 234 46.6
AUR62038416 Chenopodium quinoa HOM05D003892 ORTHO05D004522 2.6e-42 176.0 234 45.3
Ca_09081_v3 Cicer arietinum L. HOM05D003892 ORTHO05D004522 2.6e-42 176.0 234 47.0
Atru.chr8.1281 Acer truncatum HOM05D003892 ORTHO05D004522 7.5e-42 174.5 251 42.6
Phvul.001G198500 Phaseolus vulgaris HOM05D003892 ORTHO05D004522 9.7e-42 174.1 233 44.6
Eucgr.A02543 Eucalyptus grandis HOM05D003892 ORTHO05D004522 1.7e-41 173.3 228 45.6
MD12G1046200 Malus domestica HOM05D003892 ORTHO05D004522 3.7e-41 172.2 231 43.3
Nn2g14423 Nelumbo nucifera HOM05D003892 ORTHO05D004522 3.7e-41 172.2 233 47.2
MD14G1044900 Malus domestica HOM05D003892 ORTHO05D004522 4.8e-41 171.8 230 45.2
Prupe.7G089700 Prunus persica HOM05D003892 ORTHO05D004522 4.8e-41 171.8 231 43.7
CAN.G388.52 Capsicum annuum HOM05D003892 ORTHO05D004522 8.2e-41 171.0 233 44.6
SGA_v2.0_scaffold112G31566 Striga asiatica HOM05D003892 ORTHO05D004522 8.2e-41 171.0 233 42.9
TPR.G34451 Trifolium pratense HOM05D003892 ORTHO05D004522 1.1e-40 170.6 234 44.9
Lalb_Chr25g0287841 Lupinus albus HOM05D003892 ORTHO05D004522 1.4e-40 170.2 233 44.6
Sed0022353 Sechium edule HOM05D003892 ORTHO05D004522 1.4e-40 170.2 234 44.9
VMungo1383G0340 Vigna mungo HOM05D003892 ORTHO05D004522 1.4e-40 170.2 233 44.6
Sabra16G0067100 Salix brachista HOM05D003892 ORTHO05D004522 5.3e-40 168.3 233 47.6
Sed0022528 Sechium edule HOM05D003892 ORTHO05D004522 9.1e-40 167.5 234 45.7
EL10Ac5g11803 Beta vulgaris HOM05D003892 ORTHO05D004522 1.2e-39 167.2 233 45.1
ClCG10G017850 Citrullus lanatus HOM05D003892 ORTHO05D004522 1.2e-39 167.2 236 46.6
PSO832G2838 Papaver somniferum HOM05D003892 ORTHO05D004522 2.0e-39 166.4 232 46.1
Psat3g027080 Pisum sativum HOM05D003892 ORTHO05D004522 2.0e-39 166.4 233 42.9
SalBow1G1519 Salvia bowleyana HOM05D003892 ORTHO05D004522 2.7e-39 166.0 232 42.2
SalBow1G7123 Salvia bowleyana HOM05D003892 ORTHO05D004522 2.7e-39 166.0 232 42.2
Sopen01g002690 Solanum pennellii HOM05D003892 ORTHO05D004522 2.7e-39 166.0 233 45.5
PSO210G1032 Papaver somniferum HOM05D003892 ORTHO05D004522 3.5e-39 165.6 234 45.3
Aqoxy2G02397 Aquilegia oxysepala HOM05D003892 ORTHO05D004522 4.5e-39 165.2 236 44.1
Gohir.A01G199500 Gossypium hirsutum HOM05D003892 ORTHO05D004522 4.5e-39 165.2 231 44.2
Solyc01g006700.3 Solanum lycopersicum HOM05D003892 ORTHO05D004522 4.5e-39 165.2 233 43.3
Medtr7g106900 Medicago truncatula HOM05D003892 ORTHO05D004522 5.9e-39 164.9 234 44.0
unitig_749.g14208 Utricularia gibba HOM05D003892 ORTHO05D004522 7.7e-39 164.5 222 43.7
Gohir.D01G189600 Gossypium hirsutum HOM05D003892 ORTHO05D004522 1.0e-38 164.1 231 43.3
Migut.J00728 Erythranthe guttata HOM05D003892 ORTHO05D004522 1.3e-38 163.7 232 43.1
Nitab4.5_0003430g0010 Nicotiana tabacum HOM05D003892 ORTHO05D004522 1.7e-38 163.3 201 48.8
Gorai.002G233300 Gossypium raimondii HOM05D003892 ORTHO05D004522 2.9e-38 162.5 231 42.9
ECA233G3816 Erigeron canadensis HOM05D003892 ORTHO05D004522 6.5e-38 161.4 229 44.1
Lj6g0017825 Lotus japonicus HOM05D003892 ORTHO05D004522 6.5e-38 161.4 234 44.4
Lsat_1_v5_gn_2_121661 Lactuca sativa HOM05D003892 ORTHO05D004522 8.5e-38 161.0 206 47.1
Lsat_1_v5_gn_6_34240 Lactuca sativa HOM05D003892 ORTHO05D004522 1.5e-37 160.2 207 46.9
Aqoxy1G00583 Aquilegia oxysepala HOM05D003892 ORTHO05D004522 1.9e-37 159.8 235 42.1
SGA_v2.0_scaffold31G12827 Striga asiatica HOM05D003892 ORTHO05D004522 1.9e-37 159.8 232 42.7
Cfa017831 Carpinus fangiana HOM05D003892 ORTHO05D004522 5.5e-37 158.3 204 46.1
HanXRQChr02g0052851 Helianthus annuus HOM05D003892 ORTHO05D004522 5.5e-37 158.3 221 44.8
CsaV3_3G038440 Cucumis sativus L. HOM05D003892 ORTHO05D004522 9.4e-37 157.5 237 44.7
Hund10790 Selenicereus undatus HOM05D003892 ORTHO05D004522 1.2e-36 157.1 234 41.9
HanXRQChr13g0398781 Helianthus annuus HOM05D003892 ORTHO05D004522 1.6e-36 156.8 229 44.5
THA.LOC104825242 Tarenaya hassleriana HOM05D003892 ORTHO05D004522 2.1e-36 156.4 224 42.9
PGSC0003DMG400021344 Solanum tuberosum HOM05D003892 ORTHO05D004522 2.7e-36 156.0 109 67.9
Dinv25081 Davidia involucrata HOM05D003892 ORTHO05D004522 4.7e-36 155.2 100 79.0
Thhalv10010226m.g Eutrema salsugineum HOM05D003892 ORTHO05D004522 6.1e-36 154.8 213 43.2
unitig_26.g9151 Utricularia gibba HOM05D003892 ORTHO05D004522 1.0e-35 154.1 226 40.3
BcaB01g00163 Brassica carinata HOM05D003892 ORTHO05D004522 1.4e-35 153.7 212 41.5
PGR004G2391 Punica granatum HOM05D003892 ORTHO05D004522 1.4e-35 153.7 215 43.3
THA.LOC104824220 Tarenaya hassleriana HOM05D003892 ORTHO05D004522 2.3e-35 152.9 113 65.5
CSS0016552 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 3.0e-35 152.5 185 48.6
MELO3C009588.2 Cucumis melo HOM05D003892 ORTHO05D004522 4.0e-35 152.1 237 42.6
FAN05G2923 Fragaria x ananassa HOM05D003892 ORTHO05D004522 4.0e-35 152.1 232 40.9
ECA238G3852 Erigeron canadensis HOM05D003892 ORTHO05D004522 8.8e-35 151.0 233 39.5
FAN14G4612 Fragaria x ananassa HOM05D003892 ORTHO05D004522 1.2e-34 150.6 232 40.5
TWI81G0594 Tripterygium wilfordii HOM05D003892 ORTHO05D004522 2.0e-34 149.8 101 71.3
Cc06_g06980 Coffea canephora HOM05D003892 ORTHO05D004522 2.6e-34 149.4 233 39.9
FAN05G3327 Fragaria x ananassa HOM05D003892 ORTHO05D004522 2.6e-34 149.4 232 40.5
Carub.0005s2135 Capsella rubella HOM05D003892 ORTHO05D004522 5.7e-34 148.3 209 42.6
RcHm_v2.0_Chr3g0477411 Rosa chinensis HOM05D003892 ORTHO05D004522 5.7e-34 148.3 232 40.9
Aa31LG2G20030 Aethionema arabicum HOM05D003892 ORTHO05D004522 1.7e-33 146.7 222 38.7
FAN02G1525 Fragaria x ananassa HOM05D003892 ORTHO05D004522 1.7e-33 146.7 232 39.7
Sc22g0003030 Simmondsia chinensis HOM05D003892 ORTHO05D004522 2.2e-33 146.4 230 40.9
AL5G35820 Arabidopsis lyrata HOM05D003892 ORTHO05D004522 3.7e-33 145.6 212 40.6
Ah.12g059580 Amaranthus hybridus HOM05D003892 ORTHO05D004522 6.3e-33 144.8 105 63.8
Nitab4.5_0000300g0030 Nicotiana tabacum HOM05D003892 ORTHO05D004522 1.1e-32 144.1 101 69.3
Cpa.g.sc222.13 Carica papaya HOM05D003892 ORTHO05D004522 4.1e-32 142.1 229 41.0
A09p47680 Brassica napus HOM05D003892 ORTHO05D004522 7.0e-32 141.4 211 39.8
BraA09t40224Z Brassica rapa HOM05D003892 ORTHO05D004522 7.0e-32 141.4 211 39.8
Sp5g07700 Schrenkiella parvula HOM05D003892 ORTHO05D004522 7.0e-32 141.4 214 39.3
AT3G54750 Arabidopsis thaliana HOM05D003892 ORTHO05D004522 9.1e-32 141.0 212 38.2
Os12g0621700 Oryza sativa ssp. japonica HOM05D003892 ORTHO05D004522 9.1e-32 141.0 105 61.9
BcaB02g08458 Brassica carinata HOM05D003892 ORTHO05D004522 1.6e-31 140.2 214 39.7
vmacro07513 Vaccinium macrocarpon HOM05D003892 ORTHO05D004522 1.6e-31 140.2 204 44.1
CARHR164690 Cardamine hirsuta HOM05D003892 ORTHO05D004522 2.0e-31 139.8 214 42.1
FvH4_6g21040 Fragaria vesca HOM05D003892 ORTHO05D004522 2.7e-31 139.4 118 61.0
Aa31LG11G3840 Aethionema arabicum HOM05D003892 ORTHO05D004522 3.5e-31 139.0 114 57.0
BcaC02g09701 Brassica carinata HOM05D003892 ORTHO05D004522 3.5e-31 139.0 214 41.6
A04p05070 Brassica napus HOM05D003892 ORTHO05D004522 3.5e-31 139.0 214 39.3
BraA04t16218Z Brassica rapa HOM05D003892 ORTHO05D004522 5.9e-31 138.3 214 38.8
HPP92_013933 Vanilla planifolia HOM05D003892 ORTHO05D004522 5.9e-31 138.3 229 39.7
C04p37570 Brassica napus HOM05D003892 ORTHO05D004522 1.0e-30 137.5 214 41.1
Zm00001eb032200 Zea mays HOM05D003892 ORTHO05D004522 1.0e-30 137.5 105 61.9
CDE07G1113 Ceratophyllum demersum HOM05D003892 ORTHO05D004522 1.3e-30 137.1 230 38.3
BcaC07g39789 Brassica carinata HOM05D003892 ORTHO05D004522 6.5e-30 134.8 105 58.1
BolC8t50600H Brassica oleracea HOM05D003892 ORTHO05D004522 6.5e-30 134.8 105 58.1
arahy.Tifrunner.gnm1.ann1.P5VIE6 Arachis hypogaea HOM05D003892 ORTHO05D004522 8.6e-30 134.4 207 39.6
ATR0580G241 Amborella trichopoda HOM05D003892 ORTHO05D004522 2.5e-29 132.9 122 55.7
C08p29890 Brassica napus HOM05D003892 ORTHO05D004522 2.5e-29 132.9 105 57.1
MBI11_g33439_MAGBIO Magnolia biondii HOM05D003892 ORTHO05D004522 5.5e-29 131.7 86 74.4
Peaxi162Scf00210g00093 Petunia axillaris HOM05D003892 ORTHO05D004522 5.5e-29 131.7 229 36.7
Peaxi162Scf00751g00063 Petunia axillaris HOM05D003892 ORTHO05D004522 5.5e-29 131.7 229 36.7
Medtr7g029625 Medicago truncatula HOM05D003892 ORTHO05D004522 4.1e-24 115.5 211 39.8
Dinv11899 Davidia involucrata HOM05D003892 ORTHO05D004522 1.0e-22 110.9 66 81.8
SMO351G0585 Selaginella moellendorffii HOM05D003892 ORTHO05D004522 1.3e-22 110.5 112 51.8
SHI28320 Sapria himalayana HOM05D003892 ORTHO05D004522 2.5e-21 106.3 239 35.1
Pp3c4_31220 Physcomitrium patens HOM05D003892 ORTHO05D004522 3.6e-20 102.4 124 45.2
Pp3c26_8020 Physcomitrium patens HOM05D003892 ORTHO05D004522 8.0e-20 101.3 116 44.8
AagrBONN_evm.TU.Sc2ySwM_228.3493 Anthoceros agrestis HOM05D003892 ORTHO05D004522 7.5e-18 94.7 103 44.7
Mapoly0011s0047 Marchantia polymorpha HOM05D003892 ORTHO05D004522 2.9e-17 92.8 114 43.9
CBR_g20103 Chara braunii HOM05D003892 ORTHO05D004522 1.2e-12 77.4 89 47.2
Glyma.10G214400 Glycine max HOM05D003892 ORTHO05D004522 5.4e-08 62.0 47 66.0


User provided reference genes

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