Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01019045001 Vitis vinifera HOM05D007898 ORTHO05D010010 7.5e-89 330.5 166 100.0
TAR381G0528 Trochodendron aralioides HOM05D007898 ORTHO05D010010 7.3e-52 207.6 165 61.2
CiPaw.02G014000 Carya illinoinensis HOM05D007898 ORTHO05D010010 3.1e-50 202.2 165 63.0
TWI73G0930 Tripterygium wilfordii HOM05D007898 ORTHO05D010010 9.0e-50 200.7 164 64.6
CSS0004703 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 1.1e-47 193.7 172 58.7
CSS0023760 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 1.1e-47 193.7 171 59.1
RcHm_v2.0_Chr2g0103011 Rosa chinensis HOM05D007898 ORTHO05D010010 3.5e-46 188.7 164 59.8
Thecc.01G044100 Theobroma cacao HOM05D007898 ORTHO05D010010 3.5e-46 188.7 165 61.8
Sabra07G0028800 Salix brachista HOM05D007898 ORTHO05D010010 1.3e-45 186.8 163 58.3
QL06p044475 Quercus lobata HOM05D007898 ORTHO05D010010 2.3e-45 186.0 164 57.9
Prupe.7G146700 Prunus persica HOM05D007898 ORTHO05D010010 3.9e-45 185.3 172 59.3
Cfa004248 Carpinus fangiana HOM05D007898 ORTHO05D010010 8.7e-45 184.1 165 60.6
Manes.12G096600 Manihot esculenta HOM05D007898 ORTHO05D010010 8.7e-45 184.1 167 58.7
Hma1.2p1_0261F.1_g104820 Hydrangea macrophylla HOM05D007898 ORTHO05D010010 4.3e-44 181.8 153 61.4
FAN28G1054 Fragaria x ananassa HOM05D007898 ORTHO05D010010 5.6e-44 181.4 164 58.5
FAN23G0801 Fragaria x ananassa HOM05D007898 ORTHO05D010010 7.3e-44 181.0 164 57.9
PGR142G0285 Punica granatum HOM05D007898 ORTHO05D010010 7.3e-44 181.0 164 60.4
CANSAT01G0863 Cannabis sativa HOM05D007898 ORTHO05D010010 9.6e-44 180.6 168 57.7
Potri.007G032900 Populus trichocarpa HOM05D007898 ORTHO05D010010 9.6e-44 180.6 165 58.8
MD15G1271500 Malus domestica HOM05D007898 ORTHO05D010010 2.8e-43 179.1 165 58.2
Eucgr.K01101 Eucalyptus grandis HOM05D007898 ORTHO05D010010 1.1e-42 177.2 164 57.3
Dinv26786 Davidia involucrata HOM05D007898 ORTHO05D010010 1.8e-42 176.4 133 69.2
FvH4_1g14340 Fragaria vesca HOM05D007898 ORTHO05D010010 2.4e-42 176.0 164 56.7
Sed0027812 Sechium edule HOM05D007898 ORTHO05D010010 7.6e-41 171.0 166 54.8
Nn1g05126 Nelumbo nucifera HOM05D007898 ORTHO05D010010 1.4e-39 166.8 166 55.4
Gohir.D04G029100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 5.4e-39 164.9 166 57.8
Gohir.A02G162400 Gossypium hirsutum HOM05D007898 ORTHO05D010010 9.3e-39 164.1 167 56.9
Gohir.D03G018100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 9.3e-39 164.1 167 57.5
PSO170G4740 Papaver somniferum HOM05D007898 ORTHO05D010010 9.3e-39 164.1 163 54.6
arahy.Tifrunner.gnm1.ann1.P18VIJ Arachis hypogaea HOM05D007898 ORTHO05D010010 1.2e-38 163.7 159 57.2
CsaV3_6G042630 Cucumis sativus L. HOM05D007898 ORTHO05D010010 2.7e-38 162.5 169 52.1
Gohir.D04G023600 Gossypium hirsutum HOM05D007898 ORTHO05D010010 4.6e-38 161.8 174 56.9
TPR.G31555 Trifolium pratense HOM05D007898 ORTHO05D010010 4.6e-38 161.8 159 53.5
MELO3C007502.2 Cucumis melo HOM05D007898 ORTHO05D010010 3.0e-37 159.1 167 52.1
Gorai.012G033200 Gossypium raimondii HOM05D007898 ORTHO05D010010 3.9e-37 158.7 174 55.2
ClCG01G016310 Citrullus lanatus HOM05D007898 ORTHO05D010010 5.1e-37 158.3 168 49.4
THA.LOC104819816 Tarenaya hassleriana HOM05D007898 ORTHO05D010010 2.5e-36 156.0 164 50.0
Gohir.D04G023900 Gossypium hirsutum HOM05D007898 ORTHO05D010010 3.3e-36 155.6 174 55.7
Oeu043831.1 Olea europaea HOM05D007898 ORTHO05D010010 3.3e-36 155.6 154 52.6
Migut.K00847 Erythranthe guttata HOM05D007898 ORTHO05D010010 2.8e-35 152.5 155 52.9
Peaxi162Scf00535g00419 Petunia axillaris HOM05D007898 ORTHO05D010010 1.8e-34 149.8 184 46.7
Sopen02g034650 Solanum pennellii HOM05D007898 ORTHO05D010010 1.8e-34 149.8 155 52.9
Gohir.A05G386500 Gossypium hirsutum HOM05D007898 ORTHO05D010010 5.3e-34 148.3 169 53.8
arahy.Tifrunner.gnm1.ann1.376QVY Arachis hypogaea HOM05D007898 ORTHO05D010010 9.0e-34 147.5 121 62.8
AL4G13750 Arabidopsis lyrata HOM05D007898 ORTHO05D010010 2.6e-33 146.0 165 49.1
AT2G23755 Arabidopsis thaliana HOM05D007898 ORTHO05D010010 3.4e-33 145.6 164 50.0
Nitab4.5_0004932g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 3.4e-33 145.6 165 47.9
PGSC0003DMG400010085 Solanum tuberosum HOM05D007898 ORTHO05D010010 1.7e-32 143.3 155 51.0
ATR0053G039 Amborella trichopoda HOM05D007898 ORTHO05D010010 6.5e-32 141.4 157 50.3
Lj7P13T39 Lonicera japonica HOM05D007898 ORTHO05D010010 6.5e-32 141.4 132 51.5
Cc07_g05300 Coffea canephora HOM05D007898 ORTHO05D010010 1.4e-31 140.2 147 54.4
CARHR114600 Cardamine hirsuta HOM05D007898 ORTHO05D010010 1.9e-31 139.8 165 46.1
CAN.G836.11 Capsicum annuum HOM05D007898 ORTHO05D010010 4.2e-31 138.7 158 50.0
Solyc02g089960.3 Solanum lycopersicum HOM05D007898 ORTHO05D010010 4.2e-31 138.7 153 51.0
Carub.0004s0293 Capsella rubella HOM05D007898 ORTHO05D010010 7.1e-31 137.9 161 47.8
FAN26G2880 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.2e-30 137.1 133 55.6
Nitab4.5_0000483g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 2.1e-30 136.3 155 47.7
Thhalv10000478m.g Eutrema salsugineum HOM05D007898 ORTHO05D010010 6.0e-30 134.8 191 44.0
SalBow1G4022 Salvia bowleyana HOM05D007898 ORTHO05D010010 1.8e-29 133.3 158 48.7
Ah.03g142230 Amaranthus hybridus HOM05D007898 ORTHO05D010010 3.9e-29 132.1 150 46.7
Gorai.003G018300 Gossypium raimondii HOM05D007898 ORTHO05D010010 4.3e-28 128.6 173 50.3
Ciclev10027359m.g Citrus clementina HOM05D007898 ORTHO05D010010 7.4e-28 127.9 132 56.8
AUR62008035 Chenopodium quinoa HOM05D007898 ORTHO05D010010 9.6e-28 127.5 135 48.1
AUR62003213 Chenopodium quinoa HOM05D007898 ORTHO05D010010 1.8e-26 123.2 126 46.8
CDE02G3439 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 3.1e-26 122.5 145 46.9
Lj4g0012479 Lotus japonicus HOM05D007898 ORTHO05D010010 4.5e-25 118.6 111 55.9
A09p56800 Brassica napus HOM05D007898 ORTHO05D010010 1.1e-23 114.0 135 48.9
SGA_v2.0_scaffold62G21534 Striga asiatica HOM05D007898 ORTHO05D010010 4.2e-23 112.1 136 45.6
Hund14127 Selenicereus undatus HOM05D007898 ORTHO05D010010 7.1e-23 111.3 160 43.1
SHI08702 Sapria himalayana HOM05D007898 ORTHO05D010010 3.5e-22 109.0 113 53.1
BolC8t51548H Brassica oleracea HOM05D007898 ORTHO05D010010 4.6e-22 108.6 135 48.1
C08p39760 Brassica napus HOM05D007898 ORTHO05D010010 7.9e-22 107.8 136 46.3
EL10Ac6g14865 Beta vulgaris HOM05D007898 ORTHO05D010010 6.7e-21 104.8 137 43.1
Actinidia30992 Actinidia chinensis HOM05D007898 ORTHO05D010010 1.1e-20 104.0 168 40.5
TAR374G1689 Trochodendron aralioides HOM05D007898 ORTHO05D010010 2.5e-20 102.8 81 59.3
Haze_15152 Corylus avellana HOM05D007898 ORTHO05D010010 2.2e-19 99.8 167 41.3
BraA09t41069Z Brassica rapa HOM05D007898 ORTHO05D010010 5.3e-18 95.1 107 51.4
FAN19G2518 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.7e-16 90.1 94 51.1
SEGI_13764 Sequoiadendron giganteum HOM05D007898 ORTHO05D010010 6.5e-16 88.2 107 43.9
CDE02G3192 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 1.9e-15 86.7 99 47.5
Medtr8g078730 Medicago truncatula HOM05D007898 ORTHO05D010010 6.5e-08 61.6 126 36.5


User provided reference genes

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