Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015962001 Vitis vinifera HOM05D000121 ORTHO05D007423 7.1e-95 350.5 168 100.0
Haze_16670 Corylus avellana HOM05D000121 ORTHO05D007423 5.9e-57 224.6 156 71.2
Cfa001878 Carpinus fangiana HOM05D000121 ORTHO05D007423 1.9e-55 219.5 156 69.2
Prupe.3G098500 Prunus persica HOM05D000121 ORTHO05D007423 3.2e-55 218.8 156 68.6
QL05p035924 Quercus lobata HOM05D000121 ORTHO05D007423 5.5e-55 218.0 156 68.6
TAR625G0397 Trochodendron aralioides HOM05D000121 ORTHO05D007423 2.1e-54 216.1 156 69.2
RcHm_v2.0_Chr2g0132931 Rosa chinensis HOM05D000121 ORTHO05D007423 2.7e-54 215.7 156 69.9
Ciclev10024806m.g Citrus clementina HOM05D000121 ORTHO05D007423 3.6e-54 215.3 156 67.9
Dinv21413 Davidia involucrata HOM05D000121 ORTHO05D007423 6.1e-54 214.5 153 70.6
Phvul.005G175600 Phaseolus vulgaris HOM05D000121 ORTHO05D007423 3.0e-53 212.2 156 67.3
Actinidia00678 Actinidia chinensis HOM05D000121 ORTHO05D007423 5.1e-53 211.5 156 67.3
Lalb_Chr22g0349431 Lupinus albus HOM05D000121 ORTHO05D007423 8.8e-53 210.7 156 67.3
Duzib235G1084 Durio zibethinus HOM05D000121 ORTHO05D007423 1.1e-52 210.3 156 66.7
FvH4_6g28590 Fragaria vesca HOM05D000121 ORTHO05D007423 1.1e-52 210.3 156 68.6
FAN14G1613 Fragaria x ananassa HOM05D000121 ORTHO05D007423 1.1e-52 210.3 156 68.6
Glyma.13G370300 Glycine max HOM05D000121 ORTHO05D007423 1.1e-52 210.3 156 67.3
VMungo1080G0885 Vigna mungo HOM05D000121 ORTHO05D007423 1.1e-52 210.3 156 67.3
CiPaw.01G254800 Carya illinoinensis HOM05D000121 ORTHO05D007423 1.5e-52 209.9 156 67.3
Gorai.009G123500 Gossypium raimondii HOM05D000121 ORTHO05D007423 1.3e-51 206.8 156 66.7
EL10Ac9g22203 Beta vulgaris HOM05D000121 ORTHO05D007423 3.7e-51 205.3 156 62.8
MD09G1225000 Malus domestica HOM05D000121 ORTHO05D007423 3.7e-51 205.3 156 64.1
Lj3g0008200 Lotus japonicus HOM05D000121 ORTHO05D007423 6.3e-51 204.5 156 66.0
Atru.chr10.2415_Atru.chr10.2416 Acer truncatum HOM05D000121 ORTHO05D007423 1.1e-50 203.8 156 63.5
FAN05G1320 Fragaria x ananassa HOM05D000121 ORTHO05D007423 1.1e-50 203.8 165 64.8
Gohir.A05G119000 Gossypium hirsutum HOM05D000121 ORTHO05D007423 1.8e-50 203.0 156 66.0
CAN.G407.8 Capsicum annuum HOM05D000121 ORTHO05D007423 2.4e-50 202.6 156 65.4
MELO3C026737.2 Cucumis melo HOM05D000121 ORTHO05D007423 2.4e-50 202.6 156 64.7
Manes.11G066800 Manihot esculenta HOM05D000121 ORTHO05D007423 2.4e-50 202.6 156 65.4
SalBow7G3127 Salvia bowleyana HOM05D000121 ORTHO05D007423 2.4e-50 202.6 156 62.8
Cc04_g05140 Coffea canephora HOM05D000121 ORTHO05D007423 3.1e-50 202.2 153 64.7
ClCG10G012900 Citrullus lanatus HOM05D000121 ORTHO05D007423 4.1e-50 201.8 156 65.4
Eucgr.F03961 Eucalyptus grandis HOM05D000121 ORTHO05D007423 4.1e-50 201.8 156 64.1
Gohir.D05G119900 Gossypium hirsutum HOM05D000121 ORTHO05D007423 5.3e-50 201.4 156 65.4
CANSAT56G2614 Cannabis sativa HOM05D000121 ORTHO05D007423 9.1e-50 200.7 156 62.8
Peaxi162Scf00553g00540 Petunia axillaris HOM05D000121 ORTHO05D007423 9.1e-50 200.7 156 64.1
HanXRQChr04g0099601 Helianthus annuus HOM05D000121 ORTHO05D007423 2.0e-49 199.5 156 62.2
Lsat_1_v5_gn_1_31080 Lactuca sativa HOM05D000121 ORTHO05D007423 2.0e-49 199.5 156 62.2
MBI15_g18249_MAGBIO Magnolia biondii HOM05D000121 ORTHO05D007423 3.4e-49 198.7 156 62.2
Thecc.06G042000 Theobroma cacao HOM05D000121 ORTHO05D007423 4.5e-49 198.4 156 63.5
AUR62027001 Chenopodium quinoa HOM05D000121 ORTHO05D007423 5.9e-49 198.0 156 62.8
CsaV3_3G032770 Cucumis sativus L. HOM05D000121 ORTHO05D007423 1.0e-48 197.2 156 63.5
Ah.01g024650 Amaranthus hybridus HOM05D000121 ORTHO05D007423 1.7e-48 196.4 156 60.9
Solyc03g117540.4 Solanum lycopersicum HOM05D000121 ORTHO05D007423 5.0e-48 194.9 156 62.8
Sopen03g036450 Solanum pennellii HOM05D000121 ORTHO05D007423 5.0e-48 194.9 156 62.8
Sed0004285 Sechium edule HOM05D000121 ORTHO05D007423 6.5e-48 194.5 156 62.8
arahy.Tifrunner.gnm1.ann1.AY4NJ9 Arachis hypogaea HOM05D000121 ORTHO05D007423 8.5e-48 194.1 156 62.8
Rhsim08G0205400 Rhododendron simsii HOM05D000121 ORTHO05D007423 8.5e-48 194.1 156 62.2
Oeu009804.1 Olea europaea HOM05D000121 ORTHO05D007423 3.2e-47 192.2 164 58.5
arahy.Tifrunner.gnm1.ann1.5LV02X Arachis hypogaea HOM05D000121 ORTHO05D007423 7.2e-47 191.0 156 62.2
Sc12g0008290 Simmondsia chinensis HOM05D000121 ORTHO05D007423 9.4e-47 190.7 156 60.3
Aa31sc61G130 Aethionema arabicum HOM05D000121 ORTHO05D007423 1.2e-46 190.3 156 62.2
Thhalv10024220m.g Eutrema salsugineum HOM05D000121 ORTHO05D007423 2.1e-46 189.5 156 61.5
Ca_01014_v3 Cicer arietinum L. HOM05D000121 ORTHO05D007423 3.6e-46 188.7 156 62.8
A03p51040 Brassica napus HOM05D000121 ORTHO05D007423 6.1e-46 188.0 156 60.9
BraA03t14190Z Brassica rapa HOM05D000121 ORTHO05D007423 6.1e-46 188.0 156 60.9
PGR102G2529 Punica granatum HOM05D000121 ORTHO05D007423 6.1e-46 188.0 157 61.1
BolC7t45452H Brassica oleracea HOM05D000121 ORTHO05D007423 1.8e-45 186.4 156 60.3
C07p49470 Brassica napus HOM05D000121 ORTHO05D007423 3.0e-45 185.7 156 60.3
PSO384G0944 Papaver somniferum HOM05D000121 ORTHO05D007423 3.0e-45 185.7 156 59.0
Lj9C493G4 Lonicera japonica HOM05D000121 ORTHO05D007423 8.8e-45 184.1 121 70.2
Sp7g16030 Schrenkiella parvula HOM05D000121 ORTHO05D007423 8.8e-45 184.1 156 60.3
ECA247G2933 Erigeron canadensis HOM05D000121 ORTHO05D007423 1.1e-44 183.7 156 57.1
Migut.I00691 Erythranthe guttata HOM05D000121 ORTHO05D007423 1.1e-44 183.7 177 53.7
ATR0739G176 Amborella trichopoda HOM05D000121 ORTHO05D007423 2.6e-44 182.6 163 55.8
MSTRG.11184 Avicennia marina HOM05D000121 ORTHO05D007423 7.4e-44 181.0 156 59.0
vmacro19059 Vaccinium macrocarpon HOM05D000121 ORTHO05D007423 7.4e-44 181.0 156 59.0
Medtr2g105190 Medicago truncatula HOM05D000121 ORTHO05D007423 1.3e-43 180.3 156 60.3
Potri.003G182601 Populus trichocarpa HOM05D000121 ORTHO05D007423 1.3e-43 180.3 156 60.3
AL3G44200 Arabidopsis lyrata HOM05D000121 ORTHO05D007423 1.7e-43 179.9 156 59.0
TWI18G1091 Tripterygium wilfordii HOM05D000121 ORTHO05D007423 1.7e-43 179.9 156 58.3
Aqoxy7G02250 Aquilegia oxysepala HOM05D000121 ORTHO05D007423 3.7e-43 178.7 153 61.4
Aqoxy7G02252 Aquilegia oxysepala HOM05D000121 ORTHO05D007423 3.7e-43 178.7 153 61.4
AT2G07680 Arabidopsis thaliana HOM05D000121 ORTHO05D007423 1.1e-42 177.2 156 58.3
HPP92_015868 Vanilla planifolia HOM05D000121 ORTHO05D007423 7.7e-41 171.0 156 56.4
Psat5g098320 Pisum sativum HOM05D000121 ORTHO05D007423 3.8e-40 168.7 160 56.9
Sabra03G0133400 Salix brachista HOM05D000121 ORTHO05D007423 7.2e-39 164.5 193 48.7
Zm00001eb374580 Zea mays HOM05D000121 ORTHO05D007423 4.4e-36 155.2 156 51.9
Nn8g39907 Nelumbo nucifera HOM05D000121 ORTHO05D007423 2.2e-35 152.9 90 75.6
DCAR_003926 Daucus carota HOM05D000121 ORTHO05D007423 1.8e-34 149.8 108 63.0
COL.COLO4_26706 Corchorus olitorius HOM05D000121 ORTHO05D007423 2.7e-33 146.0 156 51.3
AUR62030841 Chenopodium quinoa HOM05D000121 ORTHO05D007423 8.5e-32 141.0 218 41.3
AagrBONN_evm.TU.Sc2ySwM_369.271 Anthoceros agrestis HOM05D000121 ORTHO05D007423 5.9e-25 118.2 158 39.9
Mapoly0011s0164 Marchantia polymorpha HOM05D000121 ORTHO05D007423 2.3e-21 106.3 157 35.7
Pp3c22_9930 Physcomitrium patens HOM05D000121 ORTHO05D007423 4.0e-21 105.5 155 38.1
CSS0023899 Camellia sinensis var. sinensis HOM05D000121 ORTHO05D007423 6.8e-21 104.8 66 74.2
Actinidia11263 Actinidia chinensis HOM05D000121 ORTHO05D007423 8.8e-21 104.4 110 48.2
CSS0047540 Camellia sinensis var. sinensis HOM05D000121 ORTHO05D007423 2.0e-20 103.2 66 72.7
Nitab4.5_0010868g0020 Nicotiana tabacum HOM05D000121 ORTHO05D007423 1.3e-19 100.5 90 60.0
CARHR104090 Cardamine hirsuta HOM05D000121 ORTHO05D007423 2.8e-19 99.4 92 57.6
CARHR104110 Cardamine hirsuta HOM05D000121 ORTHO05D007423 2.0e-17 93.2 67 62.7
TPR.G19154 Trifolium pratense HOM05D000121 ORTHO05D007423 5.0e-16 88.6 68 61.8
CBR_g25873 Chara braunii HOM05D000121 ORTHO05D007423 3.3e-15 85.9 164 32.9
CDE02G3275 Ceratophyllum demersum HOM05D000121 ORTHO05D007423 6.1e-14 81.6 67 58.2
Actinidia17457 Actinidia chinensis HOM05D004408 ORTHO05D005486 1.2e-12 77.4 45 73.3
Os06g0184700 Oryza sativa ssp. japonica HOM05D000121 ORTHO05D007423 9.8e-12 74.3 101 41.6
Cre14.g618600 Chlamydomonas reinhardtii HOM05D000121 ORTHO05D007423 1.6e-09 67.0 87 40.2
Nn8g39906 Nelumbo nucifera HOM05D000121 ORTHO05D007423 2.0e-09 66.6 67 53.7
Carub.0013s0012 Capsella rubella HOM05D000121 ORTHO05D018186 1.3e-08 63.9 51 56.9
SMO353G0402 Selaginella moellendorffii HOM05D000121 ORTHO05D007423 5.0e-08 62.0 113 31.0
SGA_v2.0_scaffold37G14700 Striga asiatica HOM05D000121 ORTHO05D007423 8.6e-08 61.2 73 45.2
TPR.G26233 Trifolium pratense HOM05D000121 ORTHO05D001726 9.5e-07 57.8 156 25.0
GSVIVG01021595001 Vitis vinifera HOM05D000121 ORTHO05D001726 9.5e-07 57.8 125 30.4
Thhalv10006558m.g Eutrema salsugineum HOM05D000121 ORTHO05D001726 1.2e-06 57.4 156 26.3
Ca_12391_v3 Cicer arietinum L. HOM05D000121 ORTHO05D001726 2.1e-06 56.6 145 29.7
Sed0024412 Sechium edule HOM05D000121 ORTHO05D001726 2.1e-06 56.6 156 25.6
Eucgr.E02476 Eucalyptus grandis HOM05D000121 ORTHO05D001726 2.8e-06 56.2 156 25.6
EL10Ac6g13223 Beta vulgaris HOM05D000121 ORTHO05D001726 3.6e-06 55.8 103 34.0
Duzib132G0619 Durio zibethinus HOM05D000121 ORTHO05D001726 4.7e-06 55.5 124 29.0
Psat5g224760 Pisum sativum HOM05D000121 ORTHO05D001726 4.7e-06 55.5 156 25.0
Sed0002823 Sechium edule HOM05D000121 ORTHO05D001726 4.7e-06 55.5 156 25.0
VMungo1080G1597 Vigna mungo HOM05D000121 ORTHO05D001726 4.7e-06 55.5 156 26.9
AagrBONN_evm.TU.Sc2ySwM_117.2215 Anthoceros agrestis HOM05D000121 ORTHO05D000102 6.2e-06 55.1 154 26.6
Medtr3g011820 Medicago truncatula HOM05D000121 ORTHO05D001726 6.2e-06 55.1 156 26.3
TPR.G30399 Trifolium pratense HOM05D000121 ORTHO05D001726 6.2e-06 55.1 156 25.0


User provided reference genes

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